BLASTN 2.4.0+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Database: rna.fa
           176,426 sequences; 587,117,901 total letters



Query= TTGAAGGTCGCAGAGTTCCT (evalue = 10)

Length=20
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  gi|1034625752|ref|XM_017028038.1| PREDICTED: Homo sapiens tumor...  40.1    0.002
  gi|1034625754|ref|XM_011529035.2| PREDICTED: Homo sapiens tumor...  40.1    0.002
  gi|1034625751|ref|XM_011529034.2| PREDICTED: Homo sapiens tumor...  40.1    0.002
  gi|345197263|ref|NM_001243892.1| Homo sapiens tumor protein D52...  40.1    0.002
  gi|345197261|ref|NM_001243891.1| Homo sapiens tumor protein D52...  40.1    0.002
  gi|345197259|ref|NM_199359.2| Homo sapiens tumor protein D52 li...  40.1    0.002
  gi|345197256|ref|NM_199363.2| Homo sapiens tumor protein D52 li...  40.1    0.002
  gi|345197254|ref|NM_199361.2| Homo sapiens tumor protein D52 li...  40.1    0.002
  gi|345199272|ref|NR_045090.1| Homo sapiens tumor protein D52 li...  40.1    0.002
  gi|345197255|ref|NM_003288.3| Homo sapiens tumor protein D52 li...  40.1    0.002
  gi|345197253|ref|NM_199362.2| Homo sapiens tumor protein D52 li...  40.1    0.002
  gi|345128623|ref|NM_199360.2| Homo sapiens tumor protein D52 li...  40.1    0.002
  gi|345197267|ref|NM_001243894.1| Homo sapiens tumor protein D52...  36.2    0.030
  gi|1034628108|ref|XM_017028533.1| PREDICTED: Homo sapiens growt...  28.2    7.3  
  gi|53988386|ref|NM_052869.1| Homo sapiens tweety family member ...  28.2    7.3  
  gi|1034602103|ref|XM_005257824.3| PREDICTED: Homo sapiens tweet...  28.2    7.3  
  gi|53988384|ref|NM_032646.5| Homo sapiens tweety family member ...  28.2    7.3  
  gi|1034643166|ref|XM_017008908.1| PREDICTED: Homo sapiens famil...  28.2    7.3  
  gi|193788652|ref|NM_001129891.1| Homo sapiens family with seque...  28.2    7.3  
  gi|1034643165|ref|XM_011534415.2| PREDICTED: Homo sapiens famil...  28.2    7.3  
  gi|1034554640|ref|XM_006711111.3| PREDICTED: Homo sapiens adeno...  28.2    7.3  
  gi|1034554641|ref|XM_006711113.2| PREDICTED: Homo sapiens adeno...  28.2    7.3  
  gi|1034554642|ref|XM_006711112.2| PREDICTED: Homo sapiens adeno...  28.2    7.3  
  gi|1034554643|ref|XM_017000037.1| PREDICTED: Homo sapiens adeno...  28.2    7.3  
  gi|767908089|ref|XM_011509062.1| PREDICTED: Homo sapiens adenos...  28.2    7.3  
  gi|1034554637|ref|XM_011509061.2| PREDICTED: Homo sapiens adeno...  28.2    7.3  
  gi|767908085|ref|XM_011509060.1| PREDICTED: Homo sapiens adenos...  28.2    7.3  
  gi|1034554639|ref|XM_006711109.2| PREDICTED: Homo sapiens adeno...  28.2    7.3  
  gi|301601657|ref|NM_001193495.1| Homo sapiens adenosine deamina...  28.2    7.3  
  gi|301601652|ref|NM_001111.4| Homo sapiens adenosine deaminase,...  28.2    7.3  
  gi|301601655|ref|NM_015840.3| Homo sapiens adenosine deaminase,...  28.2    7.3  
  gi|301601656|ref|NM_015841.3| Homo sapiens adenosine deaminase,...  28.2    7.3  
  gi|301601659|ref|NM_001025107.2| Homo sapiens adenosine deamina...  28.2    7.3  
  gi|1034673954|ref|XM_005274485.2| PREDICTED: Homo sapiens matri...  28.2    7.3  
  gi|201860266|ref|NM_015419.3| Homo sapiens matrix-remodelling a...  28.2    7.3  
  gi|1034632055|ref|XM_006713062.3| PREDICTED: Homo sapiens RAD54...  28.2    7.3  
  gi|1016080588|ref|NM_001322257.1| Homo sapiens RAD54-like 2 (S....  28.2    7.3  
  gi|1034632051|ref|XM_017005987.1| PREDICTED: Homo sapiens RAD54...  28.2    7.3  
  gi|1034632053|ref|XM_017005988.1| PREDICTED: Homo sapiens RAD54...  28.2    7.3  
  gi|1016080528|ref|NM_001322256.1| Homo sapiens RAD54-like 2 (S....  28.2    7.3  
  gi|1016470414|ref|NM_015106.3| Homo sapiens RAD54-like 2 (S. ce...  28.2    7.3  
  gi|1016080520|ref|NM_001322253.1| Homo sapiens RAD54-like 2 (S....  28.2    7.3  


> gi|1034625752|ref|XM_017028038.1| PREDICTED: Homo sapiens tumor 
protein D52 like 2 (TPD52L2), transcript variant X2, mRNA
Length=1110

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  626  TTGAAGGTCGCAGAGTTCCT  607


> gi|1034625754|ref|XM_011529035.2| PREDICTED: Homo sapiens tumor 
protein D52 like 2 (TPD52L2), transcript variant X3, mRNA
Length=1108

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  632  TTGAAGGTCGCAGAGTTCCT  613


> gi|1034625751|ref|XM_011529034.2| PREDICTED: Homo sapiens tumor 
protein D52 like 2 (TPD52L2), transcript variant X1, mRNA
Length=1181

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  701  TTGAAGGTCGCAGAGTTCCT  682


> gi|345197263|ref|NM_001243892.1| Homo sapiens tumor protein D52 
like 2 (TPD52L2), transcript variant 8, mRNA
Length=2230

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  503  TTGAAGGTCGCAGAGTTCCT  484


> gi|345197261|ref|NM_001243891.1| Homo sapiens tumor protein D52 
like 2 (TPD52L2), transcript variant 7, mRNA
Length=2284

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  557  TTGAAGGTCGCAGAGTTCCT  538


> gi|345197259|ref|NM_199359.2| Homo sapiens tumor protein D52 
like 2 (TPD52L2), transcript variant 6, mRNA
Length=2299

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  572  TTGAAGGTCGCAGAGTTCCT  553


> gi|345197256|ref|NM_199363.2| Homo sapiens tumor protein D52 
like 2 (TPD52L2), transcript variant 4, mRNA
Length=2341

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  614  TTGAAGGTCGCAGAGTTCCT  595


> gi|345197254|ref|NM_199361.2| Homo sapiens tumor protein D52 
like 2 (TPD52L2), transcript variant 2, mRNA
Length=2368

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  641  TTGAAGGTCGCAGAGTTCCT  622


> gi|345199272|ref|NR_045090.1| Homo sapiens tumor protein D52 
like 2 (TPD52L2), transcript variant 11, non-coding RNA
Length=2328

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  601  TTGAAGGTCGCAGAGTTCCT  582


> gi|345197255|ref|NM_003288.3| Homo sapiens tumor protein D52 
like 2 (TPD52L2), transcript variant 5, mRNA
Length=2359

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  632  TTGAAGGTCGCAGAGTTCCT  613


> gi|345197253|ref|NM_199362.2| Homo sapiens tumor protein D52 
like 2 (TPD52L2), transcript variant 3, mRNA
Length=2401

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  674  TTGAAGGTCGCAGAGTTCCT  655


> gi|345128623|ref|NM_199360.2| Homo sapiens tumor protein D52 
like 2 (TPD52L2), transcript variant 1, mRNA
Length=2428

 Score = 40.1 bits (20),  Expect = 0.002
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTCCT  20
            ||||||||||||||||||||
Sbjct  701  TTGAAGGTCGCAGAGTTCCT  682


> gi|345197267|ref|NM_001243894.1| Homo sapiens tumor protein D52 
like 2 (TPD52L2), transcript variant 9, mRNA
Length=2197

 Score = 36.2 bits (18),  Expect = 0.030
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Minus

Query  1    TTGAAGGTCGCAGAGTTC  18
            ||||||||||||||||||
Sbjct  470  TTGAAGGTCGCAGAGTTC  453


> gi|1034628108|ref|XM_017028533.1| PREDICTED: Homo sapiens growth 
arrest specific 2 like 1 (GAS2L1), transcript variant X1, 
mRNA
Length=3192

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2    TGAAGGTCGCAGAG  15
            ||||||||||||||
Sbjct  226  TGAAGGTCGCAGAG  213


> gi|53988386|ref|NM_052869.1| Homo sapiens tweety family member 
2 (TTYH2), transcript variant 2, mRNA
Length=3278

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  7     GTCGCAGAGTTCCT  20
             ||||||||||||||
Sbjct  3088  GTCGCAGAGTTCCT  3075


> gi|1034602103|ref|XM_005257824.3| PREDICTED: Homo sapiens tweety 
family member 2 (TTYH2), transcript variant X1, mRNA
Length=3375

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  7     GTCGCAGAGTTCCT  20
             ||||||||||||||
Sbjct  3206  GTCGCAGAGTTCCT  3193


> gi|53988384|ref|NM_032646.5| Homo sapiens tweety family member 
2 (TTYH2), transcript variant 1, mRNA
Length=3468

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  7     GTCGCAGAGTTCCT  20
             ||||||||||||||
Sbjct  3278  GTCGCAGAGTTCCT  3265


> gi|1034643166|ref|XM_017008908.1| PREDICTED: Homo sapiens family 
with sequence similarity 196 member B (FAM196B), transcript 
variant X2, mRNA
Length=2726

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  5     AGGTCGCAGAGTTC  18
             ||||||||||||||
Sbjct  2385  AGGTCGCAGAGTTC  2372


> gi|193788652|ref|NM_001129891.1| Homo sapiens family with sequence 
similarity 196 member B (FAM196B), mRNA
Length=3548

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  5     AGGTCGCAGAGTTC  18
             ||||||||||||||
Sbjct  2617  AGGTCGCAGAGTTC  2604


> gi|1034643165|ref|XM_011534415.2| PREDICTED: Homo sapiens family 
with sequence similarity 196 member B (FAM196B), transcript 
variant X1, mRNA
Length=5648

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  5     AGGTCGCAGAGTTC  18
             ||||||||||||||
Sbjct  2306  AGGTCGCAGAGTTC  2293


> gi|1034554640|ref|XM_006711111.3| PREDICTED: Homo sapiens adenosine 
deaminase, RNA-specific (ADAR), transcript variant X5, 
mRNA
Length=6567

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5496  TGAAGGTCGCAGAG  5483


> gi|1034554641|ref|XM_006711113.2| PREDICTED: Homo sapiens adenosine 
deaminase, RNA-specific (ADAR), transcript variant X6, 
mRNA
Length=6343

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5272  TGAAGGTCGCAGAG  5259


> gi|1034554642|ref|XM_006711112.2| PREDICTED: Homo sapiens adenosine 
deaminase, RNA-specific (ADAR), transcript variant X7, 
mRNA
Length=6269

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5198  TGAAGGTCGCAGAG  5185


> gi|1034554643|ref|XM_017000037.1| PREDICTED: Homo sapiens adenosine 
deaminase, RNA-specific (ADAR), transcript variant X8, 
mRNA
Length=6387

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5287  TGAAGGTCGCAGAG  5274


> gi|767908089|ref|XM_011509062.1| PREDICTED: Homo sapiens adenosine 
deaminase, RNA-specific (ADAR), transcript variant X4, 
mRNA
Length=6497

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5397  TGAAGGTCGCAGAG  5384


> gi|1034554637|ref|XM_011509061.2| PREDICTED: Homo sapiens adenosine 
deaminase, RNA-specific (ADAR), transcript variant X2, 
mRNA
Length=6459

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5359  TGAAGGTCGCAGAG  5346


> gi|767908085|ref|XM_011509060.1| PREDICTED: Homo sapiens adenosine 
deaminase, RNA-specific (ADAR), transcript variant X1, 
mRNA
Length=6570

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5470  TGAAGGTCGCAGAG  5457


> gi|1034554639|ref|XM_006711109.2| PREDICTED: Homo sapiens adenosine 
deaminase, RNA-specific (ADAR), transcript variant X3, 
mRNA
Length=6474

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5374  TGAAGGTCGCAGAG  5361


> gi|301601657|ref|NM_001193495.1| Homo sapiens adenosine deaminase, 
RNA-specific (ADAR), transcript variant 5, mRNA
Length=6730

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5606  TGAAGGTCGCAGAG  5593


> gi|301601652|ref|NM_001111.4| Homo sapiens adenosine deaminase, 
RNA-specific (ADAR), transcript variant 1, mRNA
Length=6692

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5568  TGAAGGTCGCAGAG  5555


> gi|301601655|ref|NM_015840.3| Homo sapiens adenosine deaminase, 
RNA-specific (ADAR), transcript variant 2, mRNA
Length=6614

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5490  TGAAGGTCGCAGAG  5477


> gi|301601656|ref|NM_015841.3| Homo sapiens adenosine deaminase, 
RNA-specific (ADAR), transcript variant 3, mRNA
Length=6557

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5433  TGAAGGTCGCAGAG  5420


> gi|301601659|ref|NM_001025107.2| Homo sapiens adenosine deaminase, 
RNA-specific (ADAR), transcript variant 4, mRNA
Length=6561

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Minus

Query  2     TGAAGGTCGCAGAG  15
             ||||||||||||||
Sbjct  5437  TGAAGGTCGCAGAG  5424


> gi|1034673954|ref|XM_005274485.2| PREDICTED: Homo sapiens matrix 
remodeling associated 5 (MXRA5), transcript variant X1, 
mRNA
Length=10243

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  3     GAAGGTCGCAGAGT  16
             ||||||||||||||
Sbjct  2890  GAAGGTCGCAGAGT  2903


> gi|201860266|ref|NM_015419.3| Homo sapiens matrix-remodelling 
associated 5 (MXRA5), mRNA
Length=9800

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  3     GAAGGTCGCAGAGT  16
             ||||||||||||||
Sbjct  2435  GAAGGTCGCAGAGT  2448


> gi|1034632055|ref|XM_006713062.3| PREDICTED: Homo sapiens RAD54-like 
2 (S. cerevisiae) (RAD54L2), transcript variant X3, 
mRNA
Length=9740

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     AAGGTCGCAGAGTT  17
             ||||||||||||||
Sbjct  5450  AAGGTCGCAGAGTT  5463


> gi|1016080588|ref|NM_001322257.1| Homo sapiens RAD54-like 2 (S. 
cerevisiae) (RAD54L2), transcript variant 4, mRNA
Length=9849

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     AAGGTCGCAGAGTT  17
             ||||||||||||||
Sbjct  5543  AAGGTCGCAGAGTT  5556


> gi|1034632051|ref|XM_017005987.1| PREDICTED: Homo sapiens RAD54-like 
2 (S. cerevisiae) (RAD54L2), transcript variant X1, 
mRNA
Length=9769

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     AAGGTCGCAGAGTT  17
             ||||||||||||||
Sbjct  5479  AAGGTCGCAGAGTT  5492


> gi|1034632053|ref|XM_017005988.1| PREDICTED: Homo sapiens RAD54-like 
2 (S. cerevisiae) (RAD54L2), transcript variant X2, 
mRNA
Length=11329

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     AAGGTCGCAGAGTT  17
             ||||||||||||||
Sbjct  7039  AAGGTCGCAGAGTT  7052


> gi|1016080528|ref|NM_001322256.1| Homo sapiens RAD54-like 2 (S. 
cerevisiae) (RAD54L2), transcript variant 3, mRNA
Length=9947

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     AAGGTCGCAGAGTT  17
             ||||||||||||||
Sbjct  5641  AAGGTCGCAGAGTT  5654


> gi|1016470414|ref|NM_015106.3| Homo sapiens RAD54-like 2 (S. 
cerevisiae) (RAD54L2), transcript variant 2, mRNA
Length=10009

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     AAGGTCGCAGAGTT  17
             ||||||||||||||
Sbjct  5703  AAGGTCGCAGAGTT  5716


> gi|1016080520|ref|NM_001322253.1| Homo sapiens RAD54-like 2 (S. 
cerevisiae) (RAD54L2), transcript variant 1, mRNA
Length=10057

 Score = 28.2 bits (14),  Expect = 7.3
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     AAGGTCGCAGAGTT  17
             ||||||||||||||
Sbjct  5751  AAGGTCGCAGAGTT  5764



Lambda      K        H
    1.37    0.711     1.31 

Gapped
Lambda      K        H
    1.37    0.711     1.31 

Effective search space used: 2337180340


  Database: rna.fa
    Posted date:  Jan 6, 2017  3:58 PM
  Number of letters in database: 587,117,901
  Number of sequences in database:  176,426



Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2