BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= TTCCTGAATAAGGGCACAGG (evalue = 10)
Length=20
Score E
Sequences producing significant alignments: (Bits) Value
gi|767967525|ref|XM_011544773.1| PREDICTED: Homo sapiens G prot... 40.1 0.002
gi|148539875|ref|NM_001619.3| Homo sapiens adrenergic, beta, re... 40.1 0.002
gi|1034572124|ref|XR_001747779.1| PREDICTED: Homo sapiens G pro... 40.1 0.002
gi|1034634716|ref|XM_017006913.1| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634696|ref|XM_017006904.1| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634698|ref|XM_011513022.2| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634694|ref|XM_011513023.2| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634692|ref|XM_017006903.1| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634678|ref|XM_017006899.1| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634674|ref|XM_011513013.2| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634676|ref|XM_017006898.1| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634684|ref|XM_017006902.1| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634680|ref|XM_017006900.1| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634682|ref|XM_017006901.1| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634688|ref|XM_011513020.2| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634686|ref|XM_011513019.2| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034634690|ref|XM_011513021.2| PREDICTED: Homo sapiens phosp... 32.2 0.47
gi|1034681891|ref|XR_001732033.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034677584|ref|XR_001756660.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034677582|ref|XR_001756658.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034677568|ref|XR_001756648.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034677566|ref|XR_001756646.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034678107|ref|XR_001756969.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034678105|ref|XR_001756968.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034678118|ref|XR_001756976.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034678117|ref|XR_001756975.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034678092|ref|XM_017030332.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034678124|ref|XR_001756825.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034678121|ref|XM_017030302.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034678120|ref|XM_011548822.2| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034678144|ref|XM_017030329.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034678142|ref|XM_017030328.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034577316|ref|XR_001748442.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|59709426|ref|NM_052898.1| Homo sapiens XK related 4 (XKR4), ... 30.2 1.9
gi|1034678500|ref|XR_957196.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|308199462|ref|NM_001197131.1| Homo sapiens protein phosphata... 28.2 7.3
gi|1034558792|ref|XM_017001355.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|268607509|ref|NM_032103.2| Homo sapiens protein phosphatase ... 28.2 7.3
gi|268607510|ref|NM_032104.2| Homo sapiens protein phosphatase ... 28.2 7.3
gi|1034558788|ref|XM_017001353.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034558769|ref|XM_017001348.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|268607505|ref|NM_002481.3| Homo sapiens protein phosphatase ... 28.2 7.3
gi|1034558778|ref|XR_001737200.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034558776|ref|XR_001737198.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034558763|ref|XM_017001345.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034558761|ref|XM_017001344.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034558773|ref|XR_001737197.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034558780|ref|XM_017001350.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034564836|ref|XR_947236.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034598790|ref|XM_005257169.4| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034598791|ref|XM_017024359.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034598789|ref|XM_011524534.2| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|387157886|ref|NR_048561.1| Homo sapiens protein phosphatase,... 28.2 7.3
gi|387157887|ref|NM_014906.4| Homo sapiens protein phosphatase,... 28.2 7.3
gi|1034633404|ref|XM_011512851.2| PREDICTED: Homo sapiens melan... 28.2 7.3
gi|1034633402|ref|XM_011512850.2| PREDICTED: Homo sapiens melan... 28.2 7.3
gi|1034633403|ref|XM_006713643.3| PREDICTED: Homo sapiens melan... 28.2 7.3
gi|302393542|ref|NM_005929.5| Homo sapiens melanotransferrin (M... 28.2 7.3
gi|1034560629|ref|XM_017001942.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|109633038|ref|NM_130440.2| Homo sapiens protein tyrosine pho... 28.2 7.3
gi|109633040|ref|NM_002840.3| Homo sapiens protein tyrosine pho... 28.2 7.3
gi|1034560640|ref|XM_017001945.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560636|ref|XM_017001943.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560632|ref|XM_005271081.3| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560627|ref|XM_005271080.3| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560646|ref|XM_017001947.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560635|ref|XM_006710800.3| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560634|ref|XM_006710799.3| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560628|ref|XM_006710796.3| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560631|ref|XM_006710797.3| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560644|ref|XM_017001946.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560643|ref|XM_006710801.3| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560642|ref|XM_005271082.3| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560638|ref|XM_017001944.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560633|ref|XM_006710798.3| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560622|ref|XM_005271079.3| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560652|ref|XM_017001950.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560648|ref|XM_017001948.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560650|ref|XM_017001949.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560625|ref|XM_006710795.3| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560624|ref|XM_011541872.2| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560623|ref|XM_011541871.2| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034560626|ref|XM_011541873.2| PREDICTED: Homo sapiens prote... 28.2 7.3
> gi|767967525|ref|XM_011544773.1| PREDICTED: Homo sapiens G protein-coupled
receptor kinase 2 (GRK2), transcript variant X1,
mRNA
Length=3183
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 TTCCTGAATAAGGGCACAGG 20
||||||||||||||||||||
Sbjct 2618 TTCCTGAATAAGGGCACAGG 2599
> gi|148539875|ref|NM_001619.3| Homo sapiens adrenergic, beta,
receptor kinase 1 (ADRBK1), mRNA
Length=3478
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 TTCCTGAATAAGGGCACAGG 20
||||||||||||||||||||
Sbjct 2877 TTCCTGAATAAGGGCACAGG 2858
> gi|1034572124|ref|XR_001747779.1| PREDICTED: Homo sapiens G protein-coupled
receptor kinase 2 (GRK2), transcript variant
X2, misc_RNA
Length=3389
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 TTCCTGAATAAGGGCACAGG 20
||||||||||||||||||||
Sbjct 2824 TTCCTGAATAAGGGCACAGG 2805
> gi|1034634716|ref|XM_017006913.1| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X22, mRNA
Length=1626
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 351 TGAATAAGGGCACAGG 336
> gi|1034634696|ref|XM_017006904.1| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X12, mRNA
Length=2290
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634698|ref|XM_011513022.2| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X13, mRNA
Length=2251
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634694|ref|XM_011513023.2| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X11, mRNA
Length=2604
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634692|ref|XM_017006903.1| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X10, mRNA
Length=2875
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634678|ref|XM_017006899.1| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X3, mRNA
Length=5456
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634674|ref|XM_011513013.2| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X1, mRNA
Length=5393
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634676|ref|XM_017006898.1| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X2, mRNA
Length=3632
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634684|ref|XM_017006902.1| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X6, mRNA
Length=3592
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634680|ref|XM_017006900.1| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X4, mRNA
Length=3529
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634682|ref|XM_017006901.1| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X5, mRNA
Length=5266
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634688|ref|XM_011513020.2| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X8, mRNA
Length=2816
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634686|ref|XM_011513019.2| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X7, mRNA
Length=2753
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034634690|ref|XM_011513021.2| PREDICTED: Homo sapiens phospholipid
scramblase 2 (PLSCR2), transcript variant X9, mRNA
Length=2553
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 5 TGAATAAGGGCACAGG 20
||||||||||||||||
Sbjct 342 TGAATAAGGGCACAGG 327
> gi|1034681891|ref|XR_001732033.1| PREDICTED: Homo sapiens uncharacterized
LOC107984409 (LOC107984409), ncRNA
Length=3945
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGC 15
|||||||||||||||
Sbjct 629 TTCCTGAATAAGGGC 643
> gi|1034677584|ref|XR_001756660.1| PREDICTED: Homo sapiens uncharacterized
LOC102723722 (LOC102723722), transcript variant
X57, misc_RNA
Length=4389
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034677582|ref|XR_001756658.1| PREDICTED: Homo sapiens uncharacterized
LOC102723722 (LOC102723722), transcript variant
X55, misc_RNA
Length=4602
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034677568|ref|XR_001756648.1| PREDICTED: Homo sapiens uncharacterized
LOC102723722 (LOC102723722), transcript variant
X41, misc_RNA
Length=5438
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034677566|ref|XR_001756646.1| PREDICTED: Homo sapiens uncharacterized
LOC102723722 (LOC102723722), transcript variant
X39, misc_RNA
Length=5651
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034678107|ref|XR_001756969.1| PREDICTED: Homo sapiens uncharacterized
LOC102723722 (LOC102723722), transcript variant
X27, misc_RNA
Length=4389
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034678105|ref|XR_001756968.1| PREDICTED: Homo sapiens uncharacterized
LOC102723722 (LOC102723722), transcript variant
X25, misc_RNA
Length=4602
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034678118|ref|XR_001756976.1| PREDICTED: Homo sapiens uncharacterized
LOC102723722 (LOC102723722), transcript variant
X38, misc_RNA
Length=4796
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034678117|ref|XR_001756975.1| PREDICTED: Homo sapiens uncharacterized
LOC102723722 (LOC102723722), transcript variant
X37, misc_RNA
Length=4839
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034678092|ref|XM_017030332.1| PREDICTED: Homo sapiens uncharacterized
LOC102723722 (LOC102723722), transcript variant
X13, mRNA
Length=2789
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034678124|ref|XR_001756825.1| PREDICTED: Homo sapiens uncharacterized
LOC107987464 (LOC107987464), transcript variant
X4, misc_RNA
Length=3018
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034678121|ref|XM_017030302.1| PREDICTED: Homo sapiens uncharacterized
LOC107987464 (LOC107987464), transcript variant
X2, mRNA
Length=2842
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034678120|ref|XM_011548822.2| PREDICTED: Homo sapiens uncharacterized
LOC107984152 (LOC107984152), mRNA
Length=2789
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034678144|ref|XM_017030329.1| PREDICTED: Homo sapiens uncharacterized
LOC107984153 (LOC107984153), transcript variant
X1, mRNA
Length=2789
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034678142|ref|XM_017030328.1| PREDICTED: Homo sapiens uncharacterized
LOC107987477 (LOC107987477), mRNA
Length=2789
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGCACAG 19
|||||||||| ||||||||
Sbjct 1074 TTCCTGAATATGGGCACAG 1092
> gi|1034577316|ref|XR_001748442.1| PREDICTED: Homo sapiens uncharacterized
LOC107984409 (LOC107984409), ncRNA
Length=3945
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGGC 15
|||||||||||||||
Sbjct 629 TTCCTGAATAAGGGC 643
> gi|59709426|ref|NM_052898.1| Homo sapiens XK related 4 (XKR4),
mRNA
Length=3925
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 TCCTGAATAAGGGCA 16
|||||||||||||||
Sbjct 1957 TCCTGAATAAGGGCA 1943
> gi|1034678500|ref|XR_957196.2| PREDICTED: Homo sapiens uncharacterized
LOC105378674 (LOC105378674), ncRNA
Length=2028
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GAATAAGGGCACAG 19
||||||||||||||
Sbjct 1979 GAATAAGGGCACAG 1992
> gi|308199462|ref|NM_001197131.1| Homo sapiens protein phosphatase
1 regulatory subunit 12B (PPP1R12B), transcript variant
7, mRNA
Length=8596
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 7737 TTCCTGAATAAGGG 7750
> gi|1034558792|ref|XM_017001355.1| PREDICTED: Homo sapiens protein
phosphatase 1 regulatory subunit 12B (PPP1R12B), transcript
variant X23, mRNA
Length=10292
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 9433 TTCCTGAATAAGGG 9446
> gi|268607509|ref|NM_032103.2| Homo sapiens protein phosphatase
1 regulatory subunit 12B (PPP1R12B), transcript variant 3,
mRNA
Length=9463
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 8604 TTCCTGAATAAGGG 8617
> gi|268607510|ref|NM_032104.2| Homo sapiens protein phosphatase
1 regulatory subunit 12B (PPP1R12B), transcript variant 4,
mRNA
Length=9644
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 8785 TTCCTGAATAAGGG 8798
> gi|1034558788|ref|XM_017001353.1| PREDICTED: Homo sapiens protein
phosphatase 1 regulatory subunit 12B (PPP1R12B), transcript
variant X21, mRNA
Length=9548
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 8689 TTCCTGAATAAGGG 8702
> gi|1034558769|ref|XM_017001348.1| PREDICTED: Homo sapiens protein
phosphatase 1 regulatory subunit 12B (PPP1R12B), transcript
variant X7, mRNA
Length=11105
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 10246 TTCCTGAATAAGGG 10259
> gi|268607505|ref|NM_002481.3| Homo sapiens protein phosphatase
1 regulatory subunit 12B (PPP1R12B), transcript variant 1,
mRNA
Length=11108
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 10249 TTCCTGAATAAGGG 10262
> gi|1034558778|ref|XR_001737200.1| PREDICTED: Homo sapiens protein
phosphatase 1 regulatory subunit 12B (PPP1R12B), transcript
variant X14, misc_RNA
Length=11252
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 10393 TTCCTGAATAAGGG 10406
> gi|1034558776|ref|XR_001737198.1| PREDICTED: Homo sapiens protein
phosphatase 1 regulatory subunit 12B (PPP1R12B), transcript
variant X12, misc_RNA
Length=11252
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 10393 TTCCTGAATAAGGG 10406
> gi|1034558763|ref|XM_017001345.1| PREDICTED: Homo sapiens protein
phosphatase 1 regulatory subunit 12B (PPP1R12B), transcript
variant X4, mRNA
Length=11288
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 10429 TTCCTGAATAAGGG 10442
> gi|1034558761|ref|XM_017001344.1| PREDICTED: Homo sapiens protein
phosphatase 1 regulatory subunit 12B (PPP1R12B), transcript
variant X3, mRNA
Length=11291
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 10432 TTCCTGAATAAGGG 10445
> gi|1034558773|ref|XR_001737197.1| PREDICTED: Homo sapiens protein
phosphatase 1 regulatory subunit 12B (PPP1R12B), transcript
variant X10, misc_RNA
Length=11435
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 10576 TTCCTGAATAAGGG 10589
> gi|1034558780|ref|XM_017001350.1| PREDICTED: Homo sapiens protein
phosphatase 1 regulatory subunit 12B (PPP1R12B), transcript
variant X16, mRNA
Length=11165
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 TTCCTGAATAAGGG 14
||||||||||||||
Sbjct 10306 TTCCTGAATAAGGG 10319
> gi|1034564836|ref|XR_947236.2| PREDICTED: Homo sapiens uncharacterized
LOC105378674 (LOC105378674), ncRNA
Length=2032
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GAATAAGGGCACAG 19
||||||||||||||
Sbjct 1983 GAATAAGGGCACAG 1996
> gi|1034598790|ref|XM_005257169.4| PREDICTED: Homo sapiens protein
phosphatase, Mg2+/Mn2+ dependent 1E (PPM1E), transcript
variant X2, mRNA
Length=6208
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 AATAAGGGCACAGG 20
||||||||||||||
Sbjct 4099 AATAAGGGCACAGG 4086
> gi|1034598791|ref|XM_017024359.1| PREDICTED: Homo sapiens protein
phosphatase, Mg2+/Mn2+ dependent 1E (PPM1E), transcript
variant X3, mRNA
Length=7500
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 AATAAGGGCACAGG 20
||||||||||||||
Sbjct 5391 AATAAGGGCACAGG 5378
> gi|1034598789|ref|XM_011524534.2| PREDICTED: Homo sapiens protein
phosphatase, Mg2+/Mn2+ dependent 1E (PPM1E), transcript
variant X1, mRNA
Length=7104
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 AATAAGGGCACAGG 20
||||||||||||||
Sbjct 4995 AATAAGGGCACAGG 4982
> gi|387157886|ref|NR_048561.1| Homo sapiens protein phosphatase,
Mg2+/Mn2+ dependent 1E (PPM1E), transcript variant 2, non-coding
RNA
Length=6345
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 AATAAGGGCACAGG 20
||||||||||||||
Sbjct 4674 AATAAGGGCACAGG 4661
> gi|387157887|ref|NM_014906.4| Homo sapiens protein phosphatase,
Mg2+/Mn2+ dependent 1E (PPM1E), transcript variant 1, mRNA
Length=6545
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 AATAAGGGCACAGG 20
||||||||||||||
Sbjct 4874 AATAAGGGCACAGG 4861
> gi|1034633404|ref|XM_011512851.2| PREDICTED: Homo sapiens melanotransferrin
(MELTF), transcript variant X3, mRNA
Length=2246
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 CTGAATAAGGGCAC 17
||||||||||||||
Sbjct 1598 CTGAATAAGGGCAC 1585
> gi|1034633402|ref|XM_011512850.2| PREDICTED: Homo sapiens melanotransferrin
(MELTF), transcript variant X1, mRNA
Length=4043
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 CTGAATAAGGGCAC 17
||||||||||||||
Sbjct 1598 CTGAATAAGGGCAC 1585
> gi|1034633403|ref|XM_006713643.3| PREDICTED: Homo sapiens melanotransferrin
(MELTF), transcript variant X2, mRNA
Length=4040
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 CTGAATAAGGGCAC 17
||||||||||||||
Sbjct 1598 CTGAATAAGGGCAC 1585
> gi|302393542|ref|NM_005929.5| Homo sapiens melanotransferrin
(MELTF), transcript variant 1, mRNA
Length=3963
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 CTGAATAAGGGCAC 17
||||||||||||||
Sbjct 1599 CTGAATAAGGGCAC 1586
> gi|1034560629|ref|XM_017001942.1| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X8, mRNA
Length=6659
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4459 CCTGAATAAGGCCACAGG 4442
> gi|109633038|ref|NM_130440.2| Homo sapiens protein tyrosine phosphatase,
receptor type F (PTPRF), transcript variant 2, mRNA
Length=7706
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4742 CCTGAATAAGGCCACAGG 4725
> gi|109633040|ref|NM_002840.3| Homo sapiens protein tyrosine phosphatase,
receptor type F (PTPRF), transcript variant 1, mRNA
Length=7733
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4769 CCTGAATAAGGCCACAGG 4752
> gi|1034560640|ref|XM_017001945.1| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X16, mRNA
Length=6685
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4485 CCTGAATAAGGCCACAGG 4468
> gi|1034560636|ref|XM_017001943.1| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X14, mRNA
Length=6712
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4512 CCTGAATAAGGCCACAGG 4495
> gi|1034560632|ref|XM_005271081.3| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X10, mRNA
Length=6991
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4791 CCTGAATAAGGCCACAGG 4774
> gi|1034560627|ref|XM_005271080.3| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X6, mRNA
Length=7018
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4818 CCTGAATAAGGCCACAGG 4801
> gi|1034560646|ref|XM_017001947.1| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X20, mRNA
Length=6118
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 3918 CCTGAATAAGGCCACAGG 3901
> gi|1034560635|ref|XM_006710800.3| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X13, mRNA
Length=6697
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4497 CCTGAATAAGGCCACAGG 4480
> gi|1034560634|ref|XM_006710799.3| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X12, mRNA
Length=6724
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4524 CCTGAATAAGGCCACAGG 4507
> gi|1034560628|ref|XM_006710796.3| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X7, mRNA
Length=7003
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4803 CCTGAATAAGGCCACAGG 4786
> gi|1034560631|ref|XM_006710797.3| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X9, mRNA
Length=6997
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4797 CCTGAATAAGGCCACAGG 4780
> gi|1034560644|ref|XM_017001946.1| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X19, mRNA
Length=6892
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 3945 CCTGAATAAGGCCACAGG 3928
> gi|1034560643|ref|XM_006710801.3| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X18, mRNA
Length=7198
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4251 CCTGAATAAGGCCACAGG 4234
> gi|1034560642|ref|XM_005271082.3| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X17, mRNA
Length=7410
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4452 CCTGAATAAGGCCACAGG 4435
> gi|1034560638|ref|XM_017001944.1| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X15, mRNA
Length=7422
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4464 CCTGAATAAGGCCACAGG 4447
> gi|1034560633|ref|XM_006710798.3| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X11, mRNA
Length=7728
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4770 CCTGAATAAGGCCACAGG 4753
> gi|1034560622|ref|XM_005271079.3| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X1, mRNA
Length=7788
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4830 CCTGAATAAGGCCACAGG 4813
> gi|1034560652|ref|XM_017001950.1| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X23, mRNA
Length=6081
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 3881 CCTGAATAAGGCCACAGG 3864
> gi|1034560648|ref|XM_017001948.1| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X21, mRNA
Length=6891
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 3944 CCTGAATAAGGCCACAGG 3927
> gi|1034560650|ref|XM_017001949.1| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X22, mRNA
Length=6856
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 3909 CCTGAATAAGGCCACAGG 3892
> gi|1034560625|ref|XM_006710795.3| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X4, mRNA
Length=7008
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4808 CCTGAATAAGGCCACAGG 4791
> gi|1034560624|ref|XM_011541872.2| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X3, mRNA
Length=7028
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4828 CCTGAATAAGGCCACAGG 4811
> gi|1034560623|ref|XM_011541871.2| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X2, mRNA
Length=7042
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4842 CCTGAATAAGGCCACAGG 4825
> gi|1034560626|ref|XM_011541873.2| PREDICTED: Homo sapiens protein
tyrosine phosphatase, receptor type F (PTPRF), transcript
variant X5, mRNA
Length=6962
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 CCTGAATAAGGGCACAGG 20
||||||||||| ||||||
Sbjct 4762 CCTGAATAAGGCCACAGG 4745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2337180340
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2