BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= TTCACAGGCAGGACAGAAGA (evalue = 10)
Length=20
Score E
Sequences producing significant alignments: (Bits) Value
gi|1034625752|ref|XM_017028038.1| PREDICTED: Homo sapiens tumor... 40.1 0.002
gi|1034625754|ref|XM_011529035.2| PREDICTED: Homo sapiens tumor... 40.1 0.002
gi|1034625751|ref|XM_011529034.2| PREDICTED: Homo sapiens tumor... 40.1 0.002
gi|345197263|ref|NM_001243892.1| Homo sapiens tumor protein D52... 40.1 0.002
gi|345197261|ref|NM_001243891.1| Homo sapiens tumor protein D52... 40.1 0.002
gi|345197259|ref|NM_199359.2| Homo sapiens tumor protein D52 li... 40.1 0.002
gi|345197256|ref|NM_199363.2| Homo sapiens tumor protein D52 li... 40.1 0.002
gi|345197254|ref|NM_199361.2| Homo sapiens tumor protein D52 li... 40.1 0.002
gi|345198269|ref|NM_001243895.1| Homo sapiens tumor protein D52... 40.1 0.002
gi|345197255|ref|NM_003288.3| Homo sapiens tumor protein D52 li... 40.1 0.002
gi|345197253|ref|NM_199362.2| Homo sapiens tumor protein D52 li... 40.1 0.002
gi|345128623|ref|NM_199360.2| Homo sapiens tumor protein D52 li... 40.1 0.002
gi|1034692781|ref|XR_949878.2| PREDICTED: Homo sapiens uncharac... 32.2 0.47
gi|1034642804|ref|XR_939023.2| PREDICTED: Homo sapiens uncharac... 32.2 0.47
gi|1034696002|ref|XR_001758323.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034696004|ref|XR_955642.2| PREDICTED: Homo sapiens uncharac... 30.2 1.9
gi|1034696003|ref|XR_001758324.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|399498573|ref|NR_073084.1| Homo sapiens cysteine rich protei... 30.2 1.9
gi|61676205|ref|NM_021257.3| Homo sapiens neuroglobin (NGB), mRNA 30.2 1.9
gi|1034657584|ref|XM_017012848.1| PREDICTED: Homo sapiens membr... 30.2 1.9
gi|1034657586|ref|XM_017012849.1| PREDICTED: Homo sapiens membr... 30.2 1.9
gi|1034657580|ref|XM_011516719.2| PREDICTED: Homo sapiens membr... 30.2 1.9
gi|1034657926|ref|XR_001745016.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034657928|ref|XR_927253.2| PREDICTED: Homo sapiens uncharac... 30.2 1.9
gi|1034657927|ref|XR_001745017.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034694368|ref|XR_001757466.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034647146|ref|XR_001742523.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034562370|ref|XM_017002480.1| PREDICTED: Homo sapiens breas... 30.2 1.9
gi|387157910|ref|NM_001261410.1| Homo sapiens breast cancer ant... 30.2 1.9
gi|387157908|ref|NM_001261409.1| Homo sapiens breast cancer ant... 30.2 1.9
gi|387157907|ref|NM_003567.3| Homo sapiens breast cancer anti-e... 30.2 1.9
gi|387157905|ref|NM_001261408.1| Homo sapiens breast cancer ant... 30.2 1.9
gi|1034562372|ref|XM_011542251.2| PREDICTED: Homo sapiens breas... 30.2 1.9
gi|815891261|ref|NM_001308251.1| Homo sapiens breast cancer ant... 30.2 1.9
gi|1034684752|ref|XR_916690.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034684751|ref|XR_001733498.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034684115|ref|XR_915453.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034628548|ref|XM_017028678.1| PREDICTED: Homo sapiens pesca... 28.2 7.3
gi|767996606|ref|XR_934622.1| PREDICTED: Homo sapiens apoptosis... 28.2 7.3
gi|1034602336|ref|XM_011525511.2| PREDICTED: Homo sapiens apopt... 28.2 7.3
gi|1034602333|ref|XM_006722195.2| PREDICTED: Homo sapiens apopt... 28.2 7.3
gi|1034602334|ref|XM_017025422.1| PREDICTED: Homo sapiens apopt... 28.2 7.3
gi|1034602329|ref|XM_011525510.2| PREDICTED: Homo sapiens apopt... 28.2 7.3
gi|335353808|ref|NM_004920.2| Homo sapiens apoptosis-associated... 28.2 7.3
gi|1034602328|ref|XM_011525509.2| PREDICTED: Homo sapiens apopt... 28.2 7.3
gi|1034602330|ref|XM_017025421.1| PREDICTED: Homo sapiens apopt... 28.2 7.3
gi|1034602332|ref|XM_006722196.2| PREDICTED: Homo sapiens apopt... 28.2 7.3
gi|767996597|ref|XM_006722193.2| PREDICTED: Homo sapiens apopto... 28.2 7.3
gi|1034602337|ref|XR_001752699.1| PREDICTED: Homo sapiens apopt... 28.2 7.3
gi|767996598|ref|XM_006722194.2| PREDICTED: Homo sapiens apopto... 28.2 7.3
gi|187937178|ref|NM_001080395.2| Homo sapiens apoptosis-associa... 28.2 7.3
gi|1034599760|ref|XM_005257377.3| PREDICTED: Homo sapiens mitog... 28.2 7.3
gi|42794764|ref|NM_002401.3| Homo sapiens mitogen-activated pro... 28.2 7.3
gi|42794766|ref|NM_203351.1| Homo sapiens mitogen-activated pro... 28.2 7.3
gi|1034599759|ref|XM_005257376.3| PREDICTED: Homo sapiens mitog... 28.2 7.3
gi|1034593471|ref|XM_017022893.1| PREDICTED: Homo sapiens synta... 28.2 7.3
gi|749502306|ref|NM_052874.4| Homo sapiens syntaxin 1B (STX1B),... 28.2 7.3
gi|339715199|ref|NM_002582.3| Homo sapiens poly(A)-specific rib... 28.2 7.3
gi|339715200|ref|NM_001242992.1| Homo sapiens poly(A)-specific ... 28.2 7.3
gi|339715202|ref|NM_001134477.2| Homo sapiens poly(A)-specific ... 28.2 7.3
gi|1034592976|ref|XR_932632.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034592975|ref|XR_001751678.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034588901|ref|XR_943698.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|525342467|ref|NM_003724.3| Homo sapiens Jrk helix-turn-helix... 28.2 7.3
gi|1034661873|ref|XM_006716678.3| PREDICTED: Homo sapiens Jrk h... 28.2 7.3
gi|1034661874|ref|XM_006716677.3| PREDICTED: Homo sapiens Jrk h... 28.2 7.3
gi|384871638|ref|NM_003840.4| Homo sapiens tumor necrosis facto... 28.2 7.3
gi|336455048|ref|NR_038873.1| Homo sapiens tumor necrosis facto... 28.2 7.3
gi|1034656114|ref|XM_011516358.2| PREDICTED: Homo sapiens non-S... 28.2 7.3
gi|530339580|ref|NM_001281933.1| Homo sapiens non-SMC condensin... 28.2 7.3
gi|1034656117|ref|XM_017012378.1| PREDICTED: Homo sapiens non-S... 28.2 7.3
gi|1034656115|ref|XM_017012377.1| PREDICTED: Homo sapiens non-S... 28.2 7.3
gi|1034656107|ref|XM_011516357.2| PREDICTED: Homo sapiens non-S... 28.2 7.3
gi|1034656106|ref|XM_011516356.2| PREDICTED: Homo sapiens non-S... 28.2 7.3
gi|1034656110|ref|XM_017012375.1| PREDICTED: Homo sapiens non-S... 28.2 7.3
gi|1034656112|ref|XM_017012376.1| PREDICTED: Homo sapiens non-S... 28.2 7.3
gi|767948168|ref|XM_011516362.1| PREDICTED: Homo sapiens non-SM... 28.2 7.3
gi|1034656108|ref|XM_017012374.1| PREDICTED: Homo sapiens non-S... 28.2 7.3
gi|767948159|ref|XM_005249547.2| PREDICTED: Homo sapiens non-SM... 28.2 7.3
gi|530339666|ref|NR_104054.1| Homo sapiens non-SMC condensin II... 28.2 7.3
gi|530339646|ref|NM_001281932.1| Homo sapiens non-SMC condensin... 28.2 7.3
gi|530339648|ref|NM_017760.6| Homo sapiens non-SMC condensin II... 28.2 7.3
gi|1034633748|ref|XM_017006568.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|1034633725|ref|XM_017006559.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|1034633754|ref|XM_006713194.3| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|1034633752|ref|XM_017006570.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|1034633723|ref|XM_017006558.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|1034633740|ref|XM_017006565.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|1034633746|ref|XM_011533800.2| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|1034633721|ref|XM_017006557.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|767923472|ref|XM_011533797.1| PREDICTED: Homo sapiens zinc f... 28.2 7.3
gi|1034633727|ref|XM_017006560.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|578806192|ref|XM_006713189.1| PREDICTED: Homo sapiens zinc f... 28.2 7.3
gi|206597475|ref|NM_016598.2| Homo sapiens zinc finger DHHC-typ... 28.2 7.3
gi|1034633729|ref|XM_017006561.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|530372615|ref|XM_005265209.1| PREDICTED: Homo sapiens zinc f... 28.2 7.3
gi|206597476|ref|NM_001135179.1| Homo sapiens zinc finger DHHC-... 28.2 7.3
gi|1034633732|ref|XM_017006562.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|1034633735|ref|XM_005265212.2| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|1034615850|ref|XM_017004693.1| PREDICTED: Homo sapiens RAB17... 28.2 7.3
gi|1034615852|ref|XM_017004694.1| PREDICTED: Homo sapiens RAB17... 28.2 7.3
gi|578804744|ref|XM_006712689.1| PREDICTED: Homo sapiens RAB17,... 28.2 7.3
gi|288557234|ref|NM_022449.3| Homo sapiens RAB17, member RAS on... 28.2 7.3
gi|288557235|ref|NR_033308.1| Homo sapiens RAB17, member RAS on... 28.2 7.3
gi|215422393|ref|NM_194322.2| Homo sapiens otoferlin (OTOF), tr... 28.2 7.3
gi|215422391|ref|NM_004802.3| Homo sapiens otoferlin (OTOF), tr... 28.2 7.3
gi|215422389|ref|NM_194323.2| Homo sapiens otoferlin (OTOF), tr... 28.2 7.3
gi|215422386|ref|NM_194248.2| Homo sapiens otoferlin (OTOF), tr... 28.2 7.3
gi|566559995|ref|NM_001287489.1| Homo sapiens otoferlin (OTOF),... 28.2 7.3
gi|1034686208|ref|XR_001734398.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034685801|ref|XR_001733975.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034695836|ref|XR_955779.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034691255|ref|XR_001749603.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034691254|ref|XR_001749602.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034677053|ref|XR_001756362.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034602620|ref|XR_001752757.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034657709|ref|XR_927604.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034648035|ref|XR_001743034.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034648009|ref|XM_011534709.2| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|323668265|ref|NR_037895.1| Homo sapiens C5orf66 antisense RN... 28.2 7.3
gi|1034637308|ref|XR_001740667.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034637307|ref|XR_001740666.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
> gi|1034625752|ref|XM_017028038.1| PREDICTED: Homo sapiens tumor
protein D52 like 2 (TPD52L2), transcript variant X2, mRNA
Length=1110
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 462 TTCACAGGCAGGACAGAAGA 481
> gi|1034625754|ref|XM_011529035.2| PREDICTED: Homo sapiens tumor
protein D52 like 2 (TPD52L2), transcript variant X3, mRNA
Length=1108
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 537 TTCACAGGCAGGACAGAAGA 556
> gi|1034625751|ref|XM_011529034.2| PREDICTED: Homo sapiens tumor
protein D52 like 2 (TPD52L2), transcript variant X1, mRNA
Length=1181
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 537 TTCACAGGCAGGACAGAAGA 556
> gi|345197263|ref|NM_001243892.1| Homo sapiens tumor protein D52
like 2 (TPD52L2), transcript variant 8, mRNA
Length=2230
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 408 TTCACAGGCAGGACAGAAGA 427
> gi|345197261|ref|NM_001243891.1| Homo sapiens tumor protein D52
like 2 (TPD52L2), transcript variant 7, mRNA
Length=2284
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 462 TTCACAGGCAGGACAGAAGA 481
> gi|345197259|ref|NM_199359.2| Homo sapiens tumor protein D52
like 2 (TPD52L2), transcript variant 6, mRNA
Length=2299
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 477 TTCACAGGCAGGACAGAAGA 496
> gi|345197256|ref|NM_199363.2| Homo sapiens tumor protein D52
like 2 (TPD52L2), transcript variant 4, mRNA
Length=2341
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 477 TTCACAGGCAGGACAGAAGA 496
> gi|345197254|ref|NM_199361.2| Homo sapiens tumor protein D52
like 2 (TPD52L2), transcript variant 2, mRNA
Length=2368
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 477 TTCACAGGCAGGACAGAAGA 496
> gi|345198269|ref|NM_001243895.1| Homo sapiens tumor protein D52
like 2 (TPD52L2), transcript variant 10, mRNA
Length=2310
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 537 TTCACAGGCAGGACAGAAGA 556
> gi|345197255|ref|NM_003288.3| Homo sapiens tumor protein D52
like 2 (TPD52L2), transcript variant 5, mRNA
Length=2359
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 537 TTCACAGGCAGGACAGAAGA 556
> gi|345197253|ref|NM_199362.2| Homo sapiens tumor protein D52
like 2 (TPD52L2), transcript variant 3, mRNA
Length=2401
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 537 TTCACAGGCAGGACAGAAGA 556
> gi|345128623|ref|NM_199360.2| Homo sapiens tumor protein D52
like 2 (TPD52L2), transcript variant 1, mRNA
Length=2428
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 TTCACAGGCAGGACAGAAGA 20
||||||||||||||||||||
Sbjct 537 TTCACAGGCAGGACAGAAGA 556
> gi|1034692781|ref|XR_949878.2| PREDICTED: Homo sapiens uncharacterized
LOC105377345 (LOC105377345), ncRNA
Length=1041
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 2 TCACAGGCAGGACAGA 17
||||||||||||||||
Sbjct 796 TCACAGGCAGGACAGA 811
> gi|1034642804|ref|XR_939023.2| PREDICTED: Homo sapiens uncharacterized
LOC105377345 (LOC105377345), ncRNA
Length=1041
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 2 TCACAGGCAGGACAGA 17
||||||||||||||||
Sbjct 796 TCACAGGCAGGACAGA 811
> gi|1034696002|ref|XR_001758323.1| PREDICTED: Homo sapiens uncharacterized
LOC105375271 (LOC105375271), transcript variant
X1, ncRNA
Length=1847
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAAG 19
|||||||||||||||
Sbjct 827 CAGGCAGGACAGAAG 813
> gi|1034696004|ref|XR_955642.2| PREDICTED: Homo sapiens uncharacterized
LOC105375271 (LOC105375271), transcript variant X3,
ncRNA
Length=1759
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAAG 19
|||||||||||||||
Sbjct 827 CAGGCAGGACAGAAG 813
> gi|1034696003|ref|XR_001758324.1| PREDICTED: Homo sapiens uncharacterized
LOC105375271 (LOC105375271), transcript variant
X2, ncRNA
Length=1799
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAAG 19
|||||||||||||||
Sbjct 827 CAGGCAGGACAGAAG 813
> gi|399498573|ref|NR_073084.1| Homo sapiens cysteine rich protein
2 (CRIP2), transcript variant 7, non-coding RNA
Length=2000
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAAG 19
|||||||||||||||
Sbjct 486 CAGGCAGGACAGAAG 472
> gi|61676205|ref|NM_021257.3| Homo sapiens neuroglobin (NGB),
mRNA
Length=1885
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAAG 19
|||||||||||||||
Sbjct 1258 CAGGCAGGACAGAAG 1244
> gi|1034657584|ref|XM_017012848.1| PREDICTED: Homo sapiens membrane
associated guanylate kinase, WW and PDZ domain containing
2 (MAGI2), transcript variant X12, mRNA
Length=10524
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAGA 17
|||||||||||||||
Sbjct 1888 CACAGGCAGGACAGA 1874
> gi|1034657586|ref|XM_017012849.1| PREDICTED: Homo sapiens membrane
associated guanylate kinase, WW and PDZ domain containing
2 (MAGI2), transcript variant X13, mRNA
Length=10518
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAGA 17
|||||||||||||||
Sbjct 1888 CACAGGCAGGACAGA 1874
> gi|1034657580|ref|XM_011516719.2| PREDICTED: Homo sapiens membrane
associated guanylate kinase, WW and PDZ domain containing
2 (MAGI2), transcript variant X9, mRNA
Length=10656
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAGA 17
|||||||||||||||
Sbjct 1891 CACAGGCAGGACAGA 1877
> gi|1034657926|ref|XR_001745016.1| PREDICTED: Homo sapiens uncharacterized
LOC105375271 (LOC105375271), transcript variant
X1, ncRNA
Length=1847
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAAG 19
|||||||||||||||
Sbjct 827 CAGGCAGGACAGAAG 813
> gi|1034657928|ref|XR_927253.2| PREDICTED: Homo sapiens uncharacterized
LOC105375271 (LOC105375271), transcript variant X3,
ncRNA
Length=1759
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAAG 19
|||||||||||||||
Sbjct 827 CAGGCAGGACAGAAG 813
> gi|1034657927|ref|XR_001745017.1| PREDICTED: Homo sapiens uncharacterized
LOC105375271 (LOC105375271), transcript variant
X2, ncRNA
Length=1799
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAAG 19
|||||||||||||||
Sbjct 827 CAGGCAGGACAGAAG 813
> gi|1034694368|ref|XR_001757466.1| PREDICTED: Homo sapiens uncharacterized
LOC107986387 (LOC107986387), ncRNA
Length=370
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 5 CAGGCAGGACAGAAG 19
|||||||||||||||
Sbjct 268 CAGGCAGGACAGAAG 282
> gi|1034647146|ref|XR_001742523.1| PREDICTED: Homo sapiens uncharacterized
LOC107986387 (LOC107986387), ncRNA
Length=370
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 5 CAGGCAGGACAGAAG 19
|||||||||||||||
Sbjct 268 CAGGCAGGACAGAAG 282
> gi|1034562370|ref|XM_017002480.1| PREDICTED: Homo sapiens breast
cancer anti-estrogen resistance 3 (BCAR3), transcript variant
X1, mRNA
Length=3595
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 2 TCACAGGCAGGACAGAAGA 20
||||| |||||||||||||
Sbjct 1634 TCACATGCAGGACAGAAGA 1652
> gi|387157910|ref|NM_001261410.1| Homo sapiens breast cancer anti-estrogen
resistance 3 (BCAR3), transcript variant 4, mRNA
Length=2893
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 2 TCACAGGCAGGACAGAAGA 20
||||| |||||||||||||
Sbjct 911 TCACATGCAGGACAGAAGA 929
> gi|387157908|ref|NM_001261409.1| Homo sapiens breast cancer anti-estrogen
resistance 3 (BCAR3), transcript variant 3, mRNA
Length=3226
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 2 TCACAGGCAGGACAGAAGA 20
||||| |||||||||||||
Sbjct 1244 TCACATGCAGGACAGAAGA 1262
> gi|387157907|ref|NM_003567.3| Homo sapiens breast cancer anti-estrogen
resistance 3 (BCAR3), transcript variant 2, mRNA
Length=3203
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 2 TCACAGGCAGGACAGAAGA 20
||||| |||||||||||||
Sbjct 1221 TCACATGCAGGACAGAAGA 1239
> gi|387157905|ref|NM_001261408.1| Homo sapiens breast cancer anti-estrogen
resistance 3 (BCAR3), transcript variant 1, mRNA
Length=3240
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 2 TCACAGGCAGGACAGAAGA 20
||||| |||||||||||||
Sbjct 1258 TCACATGCAGGACAGAAGA 1276
> gi|1034562372|ref|XM_011542251.2| PREDICTED: Homo sapiens breast
cancer anti-estrogen resistance 3 (BCAR3), transcript variant
X2, mRNA
Length=2825
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 2 TCACAGGCAGGACAGAAGA 20
||||| |||||||||||||
Sbjct 860 TCACATGCAGGACAGAAGA 878
> gi|815891261|ref|NM_001308251.1| Homo sapiens breast cancer anti-estrogen
resistance 3 (BCAR3), transcript variant 5, mRNA
Length=2244
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 2 TCACAGGCAGGACAGAAGA 20
||||| |||||||||||||
Sbjct 231 TCACATGCAGGACAGAAGA 249
> gi|1034684752|ref|XR_916690.2| PREDICTED: Homo sapiens uncharacterized
LOC105369203 (LOC105369203), transcript variant X4,
ncRNA
Length=1210
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGGCAGGACAGA 17
||||||||||||||
Sbjct 150 ACAGGCAGGACAGA 137
> gi|1034684751|ref|XR_001733498.1| PREDICTED: Homo sapiens uncharacterized
LOC105369203 (LOC105369203), transcript variant
X3, ncRNA
Length=1338
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGGCAGGACAGA 17
||||||||||||||
Sbjct 154 ACAGGCAGGACAGA 141
> gi|1034684115|ref|XR_915453.2| PREDICTED: Homo sapiens uncharacterized
LOC105370425 (LOC105370425), transcript variant X5,
ncRNA
Length=2272
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAA 18
||||||||||||||
Sbjct 239 CAGGCAGGACAGAA 226
> gi|1034628548|ref|XM_017028678.1| PREDICTED: Homo sapiens pescadillo
ribosomal biogenesis factor 1 (PES1), transcript variant
X2, mRNA
Length=4113
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 1043 CACAGGCAGGACAG 1030
> gi|767996606|ref|XR_934622.1| PREDICTED: Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant X10,
misc_RNA
Length=3603
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1987 AGGCAGGACAGAAG 1974
> gi|1034602336|ref|XM_011525511.2| PREDICTED: Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant
X9, mRNA
Length=4970
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1650 AGGCAGGACAGAAG 1637
> gi|1034602333|ref|XM_006722195.2| PREDICTED: Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant
X7, mRNA
Length=5099
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1779 AGGCAGGACAGAAG 1766
> gi|1034602334|ref|XM_017025422.1| PREDICTED: Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant
X8, mRNA
Length=5263
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1943 AGGCAGGACAGAAG 1930
> gi|1034602329|ref|XM_011525510.2| PREDICTED: Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant
X4, mRNA
Length=5117
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1797 AGGCAGGACAGAAG 1784
> gi|335353808|ref|NM_004920.2| Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant 2, mRNA
Length=5105
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1770 AGGCAGGACAGAAG 1757
> gi|1034602328|ref|XM_011525509.2| PREDICTED: Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant
X1, mRNA
Length=6741
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 3421 AGGCAGGACAGAAG 3408
> gi|1034602330|ref|XM_017025421.1| PREDICTED: Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant
X5, mRNA
Length=5104
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1784 AGGCAGGACAGAAG 1771
> gi|1034602332|ref|XM_006722196.2| PREDICTED: Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant
X6, mRNA
Length=5274
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1954 AGGCAGGACAGAAG 1941
> gi|767996597|ref|XM_006722193.2| PREDICTED: Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant
X2, mRNA
Length=5305
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1985 AGGCAGGACAGAAG 1972
> gi|1034602337|ref|XR_001752699.1| PREDICTED: Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant
X11, misc_RNA
Length=5044
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1987 AGGCAGGACAGAAG 1974
> gi|767996598|ref|XM_006722194.2| PREDICTED: Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant
X3, mRNA
Length=5157
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1837 AGGCAGGACAGAAG 1824
> gi|187937178|ref|NM_001080395.2| Homo sapiens apoptosis-associated
tyrosine kinase (AATK), transcript variant 1, mRNA
Length=5327
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 1992 AGGCAGGACAGAAG 1979
> gi|1034599760|ref|XM_005257377.3| PREDICTED: Homo sapiens mitogen-activated
protein kinase kinase kinase 3 (MAP3K3), transcript
variant X2, mRNA
Length=3226
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2538 CACAGGCAGGACAG 2525
> gi|42794764|ref|NM_002401.3| Homo sapiens mitogen-activated protein
kinase kinase kinase 3 (MAP3K3), transcript variant 2,
mRNA
Length=4750
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2826 CACAGGCAGGACAG 2813
> gi|42794766|ref|NM_203351.1| Homo sapiens mitogen-activated protein
kinase kinase kinase 3 (MAP3K3), transcript variant 1,
mRNA
Length=4843
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2919 CACAGGCAGGACAG 2906
> gi|1034599759|ref|XM_005257376.3| PREDICTED: Homo sapiens mitogen-activated
protein kinase kinase kinase 3 (MAP3K3), transcript
variant X1, mRNA
Length=3826
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 3139 CACAGGCAGGACAG 3126
> gi|1034593471|ref|XM_017022893.1| PREDICTED: Homo sapiens syntaxin
1B (STX1B), transcript variant X1, mRNA
Length=4429
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAA 18
||||||||||||||
Sbjct 2124 CAGGCAGGACAGAA 2111
> gi|749502306|ref|NM_052874.4| Homo sapiens syntaxin 1B (STX1B),
mRNA
Length=4682
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAA 18
||||||||||||||
Sbjct 2369 CAGGCAGGACAGAA 2356
> gi|339715199|ref|NM_002582.3| Homo sapiens poly(A)-specific ribonuclease
(PARN), transcript variant 1, mRNA
Length=3083
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2475 CACAGGCAGGACAG 2462
> gi|339715200|ref|NM_001242992.1| Homo sapiens poly(A)-specific
ribonuclease (PARN), transcript variant 3, mRNA
Length=2945
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2337 CACAGGCAGGACAG 2324
> gi|339715202|ref|NM_001134477.2| Homo sapiens poly(A)-specific
ribonuclease (PARN), transcript variant 2, mRNA
Length=3000
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2392 CACAGGCAGGACAG 2379
> gi|1034592976|ref|XR_932632.2| PREDICTED: Homo sapiens uncharacterized
LOC105369203 (LOC105369203), transcript variant X4,
ncRNA
Length=1210
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGGCAGGACAGA 17
||||||||||||||
Sbjct 150 ACAGGCAGGACAGA 137
> gi|1034592975|ref|XR_001751678.1| PREDICTED: Homo sapiens uncharacterized
LOC105369203 (LOC105369203), transcript variant
X3, ncRNA
Length=1338
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGGCAGGACAGA 17
||||||||||||||
Sbjct 154 ACAGGCAGGACAGA 141
> gi|1034588901|ref|XR_943698.2| PREDICTED: Homo sapiens uncharacterized
LOC105370425 (LOC105370425), transcript variant X5,
ncRNA
Length=2272
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGGCAGGACAGAA 18
||||||||||||||
Sbjct 239 CAGGCAGGACAGAA 226
> gi|525342467|ref|NM_003724.3| Homo sapiens Jrk helix-turn-helix
protein (JRK), transcript variant 1, mRNA
Length=9124
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 5351 CACAGGCAGGACAG 5338
> gi|1034661873|ref|XM_006716678.3| PREDICTED: Homo sapiens Jrk
helix-turn-helix protein (JRK), transcript variant X1, mRNA
Length=15429
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 6453 CACAGGCAGGACAG 6440
> gi|1034661874|ref|XM_006716677.3| PREDICTED: Homo sapiens Jrk
helix-turn-helix protein (JRK), transcript variant X2, mRNA
Length=14908
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 5932 CACAGGCAGGACAG 5919
> gi|384871638|ref|NM_003840.4| Homo sapiens tumor necrosis factor
receptor superfamily member 10d (TNFRSF10D), mRNA
Length=3569
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGAC 14
||||||||||||||
Sbjct 1257 TTCACAGGCAGGAC 1244
> gi|336455048|ref|NR_038873.1| Homo sapiens tumor necrosis factor
receptor superfamily member 10d, decoy with truncated death
domain pseudogene (LOC286059), non-coding RNA
Length=2636
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGAC 14
||||||||||||||
Sbjct 398 TTCACAGGCAGGAC 385
> gi|1034656114|ref|XM_011516358.2| PREDICTED: Homo sapiens non-SMC
condensin II complex subunit G2 (NCAPG2), transcript variant
X7, mRNA
Length=2969
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1734 TTCACAGGCAGGAAAGAA 1717
> gi|530339580|ref|NM_001281933.1| Homo sapiens non-SMC condensin
II complex subunit G2 (NCAPG2), transcript variant 3, mRNA
Length=5337
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1736 TTCACAGGCAGGAAAGAA 1719
> gi|1034656117|ref|XM_017012378.1| PREDICTED: Homo sapiens non-SMC
condensin II complex subunit G2 (NCAPG2), transcript variant
X9, mRNA
Length=3335
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1313 TTCACAGGCAGGAAAGAA 1296
> gi|1034656115|ref|XM_017012377.1| PREDICTED: Homo sapiens non-SMC
condensin II complex subunit G2 (NCAPG2), transcript variant
X8, mRNA
Length=2814
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 492 TTCACAGGCAGGAAAGAA 475
> gi|1034656107|ref|XM_011516357.2| PREDICTED: Homo sapiens non-SMC
condensin II complex subunit G2 (NCAPG2), transcript variant
X2, mRNA
Length=4084
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1762 TTCACAGGCAGGAAAGAA 1745
> gi|1034656106|ref|XM_011516356.2| PREDICTED: Homo sapiens non-SMC
condensin II complex subunit G2 (NCAPG2), transcript variant
X1, mRNA
Length=4056
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1734 TTCACAGGCAGGAAAGAA 1717
> gi|1034656110|ref|XM_017012375.1| PREDICTED: Homo sapiens non-SMC
condensin II complex subunit G2 (NCAPG2), transcript variant
X4, mRNA
Length=3882
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1734 TTCACAGGCAGGAAAGAA 1717
> gi|1034656112|ref|XM_017012376.1| PREDICTED: Homo sapiens non-SMC
condensin II complex subunit G2 (NCAPG2), transcript variant
X6, mRNA
Length=3759
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1734 TTCACAGGCAGGAAAGAA 1717
> gi|767948168|ref|XM_011516362.1| PREDICTED: Homo sapiens non-SMC
condensin II complex subunit G2 (NCAPG2), transcript variant
X10, mRNA
Length=2272
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 213 TTCACAGGCAGGAAAGAA 196
> gi|1034656108|ref|XM_017012374.1| PREDICTED: Homo sapiens non-SMC
condensin II complex subunit G2 (NCAPG2), transcript variant
X3, mRNA
Length=3917
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1734 TTCACAGGCAGGAAAGAA 1717
> gi|767948159|ref|XM_005249547.2| PREDICTED: Homo sapiens non-SMC
condensin II complex subunit G2 (NCAPG2), transcript variant
X5, mRNA
Length=3793
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1734 TTCACAGGCAGGAAAGAA 1717
> gi|530339666|ref|NR_104054.1| Homo sapiens non-SMC condensin
II complex subunit G2 (NCAPG2), transcript variant 4, non-coding
RNA
Length=4382
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1947 TTCACAGGCAGGAAAGAA 1930
> gi|530339646|ref|NM_001281932.1| Homo sapiens non-SMC condensin
II complex subunit G2 (NCAPG2), transcript variant 2, mRNA
Length=4129
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1789 TTCACAGGCAGGAAAGAA 1772
> gi|530339648|ref|NM_017760.6| Homo sapiens non-SMC condensin
II complex subunit G2 (NCAPG2), transcript variant 1, mRNA
Length=4076
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 TTCACAGGCAGGACAGAA 18
||||||||||||| ||||
Sbjct 1736 TTCACAGGCAGGAAAGAA 1719
> gi|1034633748|ref|XM_017006568.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X20, mRNA
Length=3660
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 1802 CACAGGCAGGACAG 1789
> gi|1034633725|ref|XM_017006559.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X3, mRNA
Length=4348
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2490 CACAGGCAGGACAG 2477
> gi|1034633754|ref|XM_006713194.3| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X23, mRNA
Length=3881
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2023 CACAGGCAGGACAG 2010
> gi|1034633752|ref|XM_017006570.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X22, mRNA
Length=4054
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2196 CACAGGCAGGACAG 2183
> gi|1034633723|ref|XM_017006558.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X2, mRNA
Length=4299
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2441 CACAGGCAGGACAG 2428
> gi|1034633740|ref|XM_017006565.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X15, mRNA
Length=4234
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2376 CACAGGCAGGACAG 2363
> gi|1034633746|ref|XM_011533800.2| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X18, mRNA
Length=4077
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2219 CACAGGCAGGACAG 2206
> gi|1034633721|ref|XM_017006557.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X1, mRNA
Length=4253
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2395 CACAGGCAGGACAG 2382
> gi|767923472|ref|XM_011533797.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X4, mRNA
Length=4084
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2226 CACAGGCAGGACAG 2213
> gi|1034633727|ref|XM_017006560.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X5, mRNA
Length=4169
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2311 CACAGGCAGGACAG 2298
> gi|578806192|ref|XM_006713189.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X7, mRNA
Length=4000
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2142 CACAGGCAGGACAG 2129
> gi|206597475|ref|NM_016598.2| Homo sapiens zinc finger DHHC-type
containing 3 (ZDHHC3), transcript variant 2, mRNA
Length=12714
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 10828 CACAGGCAGGACAG 10815
> gi|1034633729|ref|XM_017006561.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X6, mRNA
Length=4151
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2293 CACAGGCAGGACAG 2280
> gi|530372615|ref|XM_005265209.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X9, mRNA
Length=3982
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2124 CACAGGCAGGACAG 2111
> gi|206597476|ref|NM_001135179.1| Homo sapiens zinc finger DHHC-type
containing 3 (ZDHHC3), transcript variant 1, mRNA
Length=12630
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 10744 CACAGGCAGGACAG 10731
> gi|1034633732|ref|XM_017006562.1| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X10, mRNA
Length=4067
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2209 CACAGGCAGGACAG 2196
> gi|1034633735|ref|XM_005265212.2| PREDICTED: Homo sapiens zinc
finger DHHC-type containing 3 (ZDHHC3), transcript variant
X12, mRNA
Length=3906
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 2048 CACAGGCAGGACAG 2035
> gi|1034615850|ref|XM_017004693.1| PREDICTED: Homo sapiens RAB17,
member RAS oncogene family (RAB17), transcript variant X1,
mRNA
Length=2789
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 490 CACAGGCAGGACAG 477
> gi|1034615852|ref|XM_017004694.1| PREDICTED: Homo sapiens RAB17,
member RAS oncogene family (RAB17), transcript variant X2,
mRNA
Length=2723
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 490 CACAGGCAGGACAG 477
> gi|578804744|ref|XM_006712689.1| PREDICTED: Homo sapiens RAB17,
member RAS oncogene family (RAB17), transcript variant X3,
mRNA
Length=1882
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 490 CACAGGCAGGACAG 477
> gi|288557234|ref|NM_022449.3| Homo sapiens RAB17, member RAS
oncogene family (RAB17), transcript variant 1, mRNA
Length=2018
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 541 CACAGGCAGGACAG 528
> gi|288557235|ref|NR_033308.1| Homo sapiens RAB17, member RAS
oncogene family (RAB17), transcript variant 2, non-coding RNA
Length=1866
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 541 CACAGGCAGGACAG 528
> gi|215422393|ref|NM_194322.2| Homo sapiens otoferlin (OTOF),
transcript variant 3, mRNA
Length=5123
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 4844 CACAGGCAGGACAG 4831
> gi|215422391|ref|NM_004802.3| Homo sapiens otoferlin (OTOF),
transcript variant 2, mRNA
Length=4969
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 4690 CACAGGCAGGACAG 4677
> gi|215422389|ref|NM_194323.2| Homo sapiens otoferlin (OTOF),
transcript variant 4, mRNA
Length=4771
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 4492 CACAGGCAGGACAG 4479
> gi|215422386|ref|NM_194248.2| Homo sapiens otoferlin (OTOF),
transcript variant 1, mRNA
Length=7171
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 6892 CACAGGCAGGACAG 6879
> gi|566559995|ref|NM_001287489.1| Homo sapiens otoferlin (OTOF),
transcript variant 5, mRNA
Length=6973
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CACAGGCAGGACAG 16
||||||||||||||
Sbjct 6694 CACAGGCAGGACAG 6681
> gi|1034686208|ref|XR_001734398.1| PREDICTED: Homo sapiens uncharacterized
LOC107984988 (LOC107984988), ncRNA
Length=2022
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 7 GGCAGGACAGAAGA 20
||||||||||||||
Sbjct 665 GGCAGGACAGAAGA 678
> gi|1034685801|ref|XR_001733975.1| PREDICTED: Homo sapiens uncharacterized
LOC107984879 (LOC107984879), ncRNA
Length=494
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 243 AGGCAGGACAGAAG 256
> gi|1034695836|ref|XR_955779.2| PREDICTED: Homo sapiens uncharacterized
LOC105375328 (LOC105375328), transcript variant X1,
ncRNA
Length=3788
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 953 AGGCAGGACAGAAG 966
> gi|1034691255|ref|XR_001749603.1| PREDICTED: Homo sapiens uncharacterized
LOC105377046 (LOC105377046), transcript variant
X2, ncRNA
Length=6622
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 4443 AGGCAGGACAGAAG 4456
> gi|1034691254|ref|XR_001749602.1| PREDICTED: Homo sapiens uncharacterized
LOC105377046 (LOC105377046), transcript variant
X1, ncRNA
Length=6930
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 4751 AGGCAGGACAGAAG 4764
> gi|1034677053|ref|XR_001756362.1| PREDICTED: Homo sapiens uncharacterized
LOC107987417 (LOC107987417), ncRNA
Length=491
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 295 AGGCAGGACAGAAG 308
> gi|1034602620|ref|XR_001752757.1| PREDICTED: Homo sapiens uncharacterized
LOC107984988 (LOC107984988), ncRNA
Length=2022
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 7 GGCAGGACAGAAGA 20
||||||||||||||
Sbjct 665 GGCAGGACAGAAGA 678
> gi|1034657709|ref|XR_927604.2| PREDICTED: Homo sapiens uncharacterized
LOC105375328 (LOC105375328), transcript variant X1,
ncRNA
Length=3768
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 953 AGGCAGGACAGAAG 966
> gi|1034648035|ref|XR_001743034.1| PREDICTED: Homo sapiens uncharacterized
LOC107986491 (LOC107986491), ncRNA
Length=1224
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 CAGGCAGGACAGAA 18
||||||||||||||
Sbjct 445 CAGGCAGGACAGAA 458
> gi|1034648009|ref|XM_011534709.2| PREDICTED: Homo sapiens uncharacterized
LOC105377746 (LOC105377746), mRNA
Length=2685
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 CAGGCAGGACAGAA 18
||||||||||||||
Sbjct 487 CAGGCAGGACAGAA 500
> gi|323668265|ref|NR_037895.1| Homo sapiens C5orf66 antisense
RNA 2 (C5orf66-AS2), long non-coding RNA
Length=2175
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 7 GGCAGGACAGAAGA 20
||||||||||||||
Sbjct 1898 GGCAGGACAGAAGA 1911
> gi|1034637308|ref|XR_001740667.1| PREDICTED: Homo sapiens uncharacterized
LOC105377046 (LOC105377046), transcript variant
X2, ncRNA
Length=6622
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 4443 AGGCAGGACAGAAG 4456
> gi|1034637307|ref|XR_001740666.1| PREDICTED: Homo sapiens uncharacterized
LOC105377046 (LOC105377046), transcript variant
X1, ncRNA
Length=6930
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 AGGCAGGACAGAAG 19
||||||||||||||
Sbjct 4751 AGGCAGGACAGAAG 4764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2337180340
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2