BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= GTGGTCAACAGCCAGCTCA (evalue = 10)
Length=19
Score E
Sequences producing significant alignments: (Bits) Value
gi|1034560350|ref|XM_017001855.1| PREDICTED: Homo sapiens caten... 38.2 0.006
gi|1034560348|ref|XM_017001854.1| PREDICTED: Homo sapiens caten... 38.2 0.006
gi|59889553|ref|NM_020248.2| Homo sapiens catenin beta interact... 38.2 0.006
gi|59889554|ref|NM_001012329.1| Homo sapiens catenin beta inter... 38.2 0.006
gi|1034560346|ref|XM_017001853.1| PREDICTED: Homo sapiens caten... 38.2 0.006
gi|194018558|ref|NM_012125.3| Homo sapiens cholinergic receptor... 32.2 0.35
gi|1004170597|ref|NM_001320917.1| Homo sapiens cholinergic rece... 32.2 0.35
gi|1034681752|ref|XR_913524.2| PREDICTED: Homo sapiens uncharac... 30.2 1.4
gi|1034599860|ref|XM_017024682.1| PREDICTED: Homo sapiens myosi... 30.2 1.4
gi|1034599854|ref|XM_017024679.1| PREDICTED: Homo sapiens myosi... 30.2 1.4
gi|1034599852|ref|XM_017024678.1| PREDICTED: Homo sapiens myosi... 30.2 1.4
gi|1034599858|ref|XM_017024681.1| PREDICTED: Homo sapiens myosi... 30.2 1.4
gi|1034599850|ref|XM_017024677.1| PREDICTED: Homo sapiens myosi... 30.2 1.4
gi|1034599862|ref|XM_011523875.2| PREDICTED: Homo sapiens myosi... 30.2 1.4
gi|1034599848|ref|XM_011523879.2| PREDICTED: Homo sapiens myosi... 30.2 1.4
gi|1034599849|ref|XM_011523880.2| PREDICTED: Homo sapiens myosi... 30.2 1.4
gi|1034599856|ref|XM_017024680.1| PREDICTED: Homo sapiens myosi... 30.2 1.4
gi|1034599847|ref|XM_011523878.2| PREDICTED: Homo sapiens myosi... 30.2 1.4
gi|365192531|ref|NM_001256012.1| Homo sapiens myosin, heavy cha... 30.2 1.4
gi|367460089|ref|NM_001256095.1| Homo sapiens myosin, heavy cha... 30.2 1.4
gi|367460086|ref|NM_005964.3| Homo sapiens myosin, heavy chain ... 30.2 1.4
gi|1034577174|ref|XR_948010.2| PREDICTED: Homo sapiens uncharac... 30.2 1.4
gi|1034683751|ref|XR_001732993.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034698046|ref|XM_017030506.1| PREDICTED: Homo sapiens conta... 28.2 5.5
gi|1034698342|ref|XM_017030525.1| PREDICTED: Homo sapiens conta... 28.2 5.5
gi|1034698344|ref|XR_001759417.1| PREDICTED: Homo sapiens conta... 28.2 5.5
gi|1034698340|ref|XM_017030524.1| PREDICTED: Homo sapiens conta... 28.2 5.5
gi|1034698350|ref|XR_001759419.1| PREDICTED: Homo sapiens conta... 28.2 5.5
gi|1034698345|ref|XR_001759418.1| PREDICTED: Homo sapiens conta... 28.2 5.5
gi|1034698336|ref|XM_017030522.1| PREDICTED: Homo sapiens conta... 28.2 5.5
gi|1034698338|ref|XM_017030523.1| PREDICTED: Homo sapiens conta... 28.2 5.5
gi|1034698334|ref|XM_017030521.1| PREDICTED: Homo sapiens conta... 28.2 5.5
gi|1034698332|ref|XM_017030520.1| PREDICTED: Homo sapiens conta... 28.2 5.5
gi|1034628455|ref|XM_006724165.3| PREDICTED: Homo sapiens E1A b... 28.2 5.5
gi|189011537|ref|NM_001429.3| Homo sapiens E1A binding protein ... 28.2 5.5
gi|1034589271|ref|XR_001750909.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034581402|ref|XM_017019906.1| PREDICTED: Homo sapiens sulfi... 28.2 5.5
gi|1034581406|ref|XM_017019908.1| PREDICTED: Homo sapiens sulfi... 28.2 5.5
gi|530400754|ref|XM_005269112.1| PREDICTED: Homo sapiens sulfit... 28.2 5.5
gi|74099703|ref|NM_001032387.1| Homo sapiens sulfite oxidase (S... 28.2 5.5
gi|74099701|ref|NM_001032386.1| Homo sapiens sulfite oxidase (S... 28.2 5.5
gi|74099693|ref|NM_000456.2| Homo sapiens sulfite oxidase (SUOX... 28.2 5.5
gi|1034581400|ref|XM_017019905.1| PREDICTED: Homo sapiens sulfi... 28.2 5.5
gi|1034581404|ref|XM_017019907.1| PREDICTED: Homo sapiens sulfi... 28.2 5.5
gi|1034575922|ref|XM_011543041.2| PREDICTED: Homo sapiens ubiqu... 28.2 5.5
gi|1034575921|ref|XM_005271712.3| PREDICTED: Homo sapiens ubiqu... 28.2 5.5
gi|767970707|ref|XM_011543042.1| PREDICTED: Homo sapiens ubiqui... 28.2 5.5
gi|163644319|ref|NM_032873.4| Homo sapiens ubiquitin associated... 28.2 5.5
gi|381342489|ref|NR_002728.3| Homo sapiens KCNQ1 opposite stran... 28.2 5.5
gi|1013071131|ref|NR_111893.2| Homo sapiens contactin associate... 28.2 5.5
gi|1034672319|ref|XM_017015388.1| PREDICTED: Homo sapiens conta... 28.2 5.5
gi|597955307|ref|NM_001201380.2| Homo sapiens contactin associa... 28.2 5.5
gi|117306179|ref|NM_033655.3| Homo sapiens contactin associated... 28.2 5.5
gi|1034659587|ref|XM_011544440.2| PREDICTED: Homo sapiens exost... 28.2 5.5
gi|425905356|ref|NR_073469.1| Homo sapiens exostosin like glyco... 28.2 5.5
gi|425905351|ref|NM_001440.3| Homo sapiens exostosin like glyco... 28.2 5.5
gi|282394048|ref|NM_207360.2| Homo sapiens zinc finger CCCH-typ... 28.2 5.5
gi|358438249|ref|NM_001177639.2| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|358438227|ref|NM_001177635.2| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|358438298|ref|NM_004393.5| Homo sapiens dystroglycan 1 (DAG1... 28.2 5.5
gi|358438270|ref|NM_001177641.2| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|358438265|ref|NM_001177638.2| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|358438242|ref|NM_001177637.2| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|358438210|ref|NM_001165928.3| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|358438238|ref|NM_001177636.2| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|358438284|ref|NM_001177642.2| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|358438256|ref|NM_001177640.2| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|358438222|ref|NM_001177634.2| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|358438291|ref|NM_001177644.2| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|358438205|ref|NM_001177643.2| Homo sapiens dystroglycan 1 (D... 28.2 5.5
gi|209977078|ref|NM_018254.3| Homo sapiens REST corepressor 3 (... 28.2 5.5
gi|1034560098|ref|XR_921878.2| PREDICTED: Homo sapiens REST cor... 28.2 5.5
gi|1034560083|ref|XM_017001766.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560070|ref|XM_011509748.2| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560077|ref|XM_011509749.2| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560082|ref|XM_006711442.2| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560069|ref|XM_005273191.4| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560065|ref|XM_017001759.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560096|ref|XR_001737309.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560099|ref|XR_001737311.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560071|ref|XM_017001761.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560078|ref|XM_017001764.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|256818747|ref|NM_001136224.2| Homo sapiens REST corepressor ... 28.2 5.5
gi|209977079|ref|NM_001136223.1| Homo sapiens REST corepressor ... 28.2 5.5
gi|1034560086|ref|XR_001737301.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560080|ref|XM_017001765.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560067|ref|XM_017001760.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560097|ref|XR_001737310.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560073|ref|XM_017001762.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560075|ref|XM_017001763.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560063|ref|XM_017001758.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560085|ref|XR_001737300.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560089|ref|XR_001737304.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560088|ref|XR_001737303.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560087|ref|XR_001737302.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
gi|1034560093|ref|XR_001737306.1| PREDICTED: Homo sapiens REST ... 28.2 5.5
> gi|1034560350|ref|XM_017001855.1| PREDICTED: Homo sapiens catenin
beta interacting protein 1 (CTNNBIP1), transcript variant
X3, mRNA
Length=2937
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCAGCTCA 19
|||||||||||||||||||
Sbjct 388 GTGGTCAACAGCCAGCTCA 406
> gi|1034560348|ref|XM_017001854.1| PREDICTED: Homo sapiens catenin
beta interacting protein 1 (CTNNBIP1), transcript variant
X2, mRNA
Length=3094
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCAGCTCA 19
|||||||||||||||||||
Sbjct 545 GTGGTCAACAGCCAGCTCA 563
> gi|59889553|ref|NM_020248.2| Homo sapiens catenin beta interacting
protein 1 (CTNNBIP1), transcript variant 1, mRNA
Length=2995
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCAGCTCA 19
|||||||||||||||||||
Sbjct 446 GTGGTCAACAGCCAGCTCA 464
> gi|59889554|ref|NM_001012329.1| Homo sapiens catenin beta interacting
protein 1 (CTNNBIP1), transcript variant 2, mRNA
Length=2961
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCAGCTCA 19
|||||||||||||||||||
Sbjct 412 GTGGTCAACAGCCAGCTCA 430
> gi|1034560346|ref|XM_017001853.1| PREDICTED: Homo sapiens catenin
beta interacting protein 1 (CTNNBIP1), transcript variant
X1, mRNA
Length=3220
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCAGCTCA 19
|||||||||||||||||||
Sbjct 671 GTGGTCAACAGCCAGCTCA 689
> gi|194018558|ref|NM_012125.3| Homo sapiens cholinergic receptor
muscarinic 5 (CHRM5), transcript variant 1, mRNA
Length=3055
Score = 32.2 bits (16), Expect = 0.35
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 GTCAACAGCCAGCTCA 19
||||||||||||||||
Sbjct 839 GTCAACAGCCAGCTCA 854
> gi|1004170597|ref|NM_001320917.1| Homo sapiens cholinergic receptor
muscarinic 5 (CHRM5), transcript variant 2, mRNA
Length=3303
Score = 32.2 bits (16), Expect = 0.35
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 GTCAACAGCCAGCTCA 19
||||||||||||||||
Sbjct 1081 GTCAACAGCCAGCTCA 1096
> gi|1034681752|ref|XR_913524.2| PREDICTED: Homo sapiens uncharacterized
LOC105369490 (LOC105369490), ncRNA
Length=2559
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 2 TGGTCAACAGCCAGC 16
|||||||||||||||
Sbjct 2181 TGGTCAACAGCCAGC 2195
> gi|1034599860|ref|XM_017024682.1| PREDICTED: Homo sapiens myosin,
heavy chain 10, non-muscle (MYH10), transcript variant
X9, mRNA
Length=7674
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7503 GTGGTCAACAGCCAG 7489
> gi|1034599854|ref|XM_017024679.1| PREDICTED: Homo sapiens myosin,
heavy chain 10, non-muscle (MYH10), transcript variant
X6, mRNA
Length=7770
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7599 GTGGTCAACAGCCAG 7585
> gi|1034599852|ref|XM_017024678.1| PREDICTED: Homo sapiens myosin,
heavy chain 10, non-muscle (MYH10), transcript variant
X5, mRNA
Length=7729
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7558 GTGGTCAACAGCCAG 7544
> gi|1034599858|ref|XM_017024681.1| PREDICTED: Homo sapiens myosin,
heavy chain 10, non-muscle (MYH10), transcript variant
X8, mRNA
Length=7699
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7528 GTGGTCAACAGCCAG 7514
> gi|1034599850|ref|XM_017024677.1| PREDICTED: Homo sapiens myosin,
heavy chain 10, non-muscle (MYH10), transcript variant
X4, mRNA
Length=7747
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7576 GTGGTCAACAGCCAG 7562
> gi|1034599862|ref|XM_011523875.2| PREDICTED: Homo sapiens myosin,
heavy chain 10, non-muscle (MYH10), transcript variant
X10, mRNA
Length=8044
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7873 GTGGTCAACAGCCAG 7859
> gi|1034599848|ref|XM_011523879.2| PREDICTED: Homo sapiens myosin,
heavy chain 10, non-muscle (MYH10), transcript variant
X2, mRNA
Length=7978
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7807 GTGGTCAACAGCCAG 7793
> gi|1034599849|ref|XM_011523880.2| PREDICTED: Homo sapiens myosin,
heavy chain 10, non-muscle (MYH10), transcript variant
X3, mRNA
Length=7951
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7780 GTGGTCAACAGCCAG 7766
> gi|1034599856|ref|XM_017024680.1| PREDICTED: Homo sapiens myosin,
heavy chain 10, non-muscle (MYH10), transcript variant
X7, mRNA
Length=8078
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7907 GTGGTCAACAGCCAG 7893
> gi|1034599847|ref|XM_011523878.2| PREDICTED: Homo sapiens myosin,
heavy chain 10, non-muscle (MYH10), transcript variant
X1, mRNA
Length=8033
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7862 GTGGTCAACAGCCAG 7848
> gi|365192531|ref|NM_001256012.1| Homo sapiens myosin, heavy chain
10, non-muscle (MYH10), transcript variant 1, mRNA
Length=7778
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7584 GTGGTCAACAGCCAG 7570
> gi|367460089|ref|NM_001256095.1| Homo sapiens myosin, heavy chain
10, non-muscle (MYH10), transcript variant 3, mRNA
Length=7712
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7518 GTGGTCAACAGCCAG 7504
> gi|367460086|ref|NM_005964.3| Homo sapiens myosin, heavy chain
10, non-muscle (MYH10), transcript variant 2, mRNA
Length=7685
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GTGGTCAACAGCCAG 15
|||||||||||||||
Sbjct 7491 GTGGTCAACAGCCAG 7477
> gi|1034577174|ref|XR_948010.2| PREDICTED: Homo sapiens uncharacterized
LOC105369490 (LOC105369490), ncRNA
Length=2559
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 2 TGGTCAACAGCCAGC 16
|||||||||||||||
Sbjct 2181 TGGTCAACAGCCAGC 2195
> gi|1034683751|ref|XR_001732993.1| PREDICTED: Homo sapiens uncharacterized
LOC105370690 (LOC105370690), transcript variant
X2, ncRNA
Length=1672
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 1056 TCAACAGCCAGCTC 1069
> gi|1034698046|ref|XM_017030506.1| PREDICTED: Homo sapiens contactin-associated
protein-like 3B (LOC107984101), mRNA
Length=1171
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 701 TCAACAGCCAGCTC 714
> gi|1034698342|ref|XM_017030525.1| PREDICTED: Homo sapiens contactin-associated
protein-like 3B (LOC107984062), transcript
variant X6, mRNA
Length=4097
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 3291 TCAACAGCCAGCTC 3304
> gi|1034698344|ref|XR_001759417.1| PREDICTED: Homo sapiens contactin-associated
protein-like 3B (LOC107984062), transcript
variant X7, misc_RNA
Length=4044
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 3291 TCAACAGCCAGCTC 3304
> gi|1034698340|ref|XM_017030524.1| PREDICTED: Homo sapiens contactin-associated
protein-like 3B (LOC107984062), transcript
variant X5, mRNA
Length=4332
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 3291 TCAACAGCCAGCTC 3304
> gi|1034698350|ref|XR_001759419.1| PREDICTED: Homo sapiens contactin-associated
protein-like 3B (LOC107984062), transcript
variant X11, misc_RNA
Length=6103
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 3134 TCAACAGCCAGCTC 3147
> gi|1034698345|ref|XR_001759418.1| PREDICTED: Homo sapiens contactin-associated
protein-like 3B (LOC107984062), transcript
variant X8, misc_RNA
Length=6261
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 3292 TCAACAGCCAGCTC 3305
> gi|1034698336|ref|XM_017030522.1| PREDICTED: Homo sapiens contactin-associated
protein-like 3B (LOC107984062), transcript
variant X3, mRNA
Length=4411
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 3139 TCAACAGCCAGCTC 3152
> gi|1034698338|ref|XM_017030523.1| PREDICTED: Homo sapiens contactin-associated
protein-like 3B (LOC107984062), transcript
variant X4, mRNA
Length=4285
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 3013 TCAACAGCCAGCTC 3026
> gi|1034698334|ref|XM_017030521.1| PREDICTED: Homo sapiens contactin-associated
protein-like 3B (LOC107984062), transcript
variant X2, mRNA
Length=4535
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 3263 TCAACAGCCAGCTC 3276
> gi|1034698332|ref|XM_017030520.1| PREDICTED: Homo sapiens contactin-associated
protein-like 3B (LOC107984062), transcript
variant X1, mRNA
Length=8277
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 3292 TCAACAGCCAGCTC 3305
> gi|1034628455|ref|XM_006724165.3| PREDICTED: Homo sapiens E1A
binding protein p300 (EP300), transcript variant X1, mRNA
Length=8383
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 1002 GGTCAACAGCCAGC 1015
> gi|189011537|ref|NM_001429.3| Homo sapiens E1A binding protein
p300 (EP300), mRNA
Length=8761
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 1302 GGTCAACAGCCAGC 1315
> gi|1034589271|ref|XR_001750909.1| PREDICTED: Homo sapiens uncharacterized
LOC105370690 (LOC105370690), transcript variant
X2, ncRNA
Length=1672
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 1056 TCAACAGCCAGCTC 1069
> gi|1034581402|ref|XM_017019906.1| PREDICTED: Homo sapiens sulfite
oxidase (SUOX), transcript variant X3, mRNA
Length=2296
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 721 GGTCAACAGCCAGC 734
> gi|1034581406|ref|XM_017019908.1| PREDICTED: Homo sapiens sulfite
oxidase (SUOX), transcript variant X5, mRNA
Length=2237
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 662 GGTCAACAGCCAGC 675
> gi|530400754|ref|XM_005269112.1| PREDICTED: Homo sapiens sulfite
oxidase (SUOX), transcript variant X2, mRNA
Length=2318
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 743 GGTCAACAGCCAGC 756
> gi|74099703|ref|NM_001032387.1| Homo sapiens sulfite oxidase
(SUOX), transcript variant 3, mRNA
Length=2329
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 652 GGTCAACAGCCAGC 665
> gi|74099701|ref|NM_001032386.1| Homo sapiens sulfite oxidase
(SUOX), transcript variant 2, mRNA
Length=2438
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 761 GGTCAACAGCCAGC 774
> gi|74099693|ref|NM_000456.2| Homo sapiens sulfite oxidase (SUOX),
transcript variant 1, mRNA
Length=2564
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 887 GGTCAACAGCCAGC 900
> gi|1034581400|ref|XM_017019905.1| PREDICTED: Homo sapiens sulfite
oxidase (SUOX), transcript variant X1, mRNA
Length=3008
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 1433 GGTCAACAGCCAGC 1446
> gi|1034581404|ref|XM_017019907.1| PREDICTED: Homo sapiens sulfite
oxidase (SUOX), transcript variant X4, mRNA
Length=3077
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 1502 GGTCAACAGCCAGC 1515
> gi|1034575922|ref|XM_011543041.2| PREDICTED: Homo sapiens ubiquitin
associated and SH3 domain containing B (UBASH3B), transcript
variant X2, mRNA
Length=6535
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 1120 GGTCAACAGCCAGC 1133
> gi|1034575921|ref|XM_005271712.3| PREDICTED: Homo sapiens ubiquitin
associated and SH3 domain containing B (UBASH3B), transcript
variant X1, mRNA
Length=9143
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 3728 GGTCAACAGCCAGC 3741
> gi|767970707|ref|XM_011543042.1| PREDICTED: Homo sapiens ubiquitin
associated and SH3 domain containing B (UBASH3B), transcript
variant X3, mRNA
Length=6901
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 1486 GGTCAACAGCCAGC 1499
> gi|163644319|ref|NM_032873.4| Homo sapiens ubiquitin associated
and SH3 domain containing B (UBASH3B), mRNA
Length=6917
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GGTCAACAGCCAGC 16
||||||||||||||
Sbjct 1482 GGTCAACAGCCAGC 1495
> gi|381342489|ref|NR_002728.3| Homo sapiens KCNQ1 opposite strand/antisense
transcript 1 (non-protein coding) (KCNQ1OT1),
long non-coding RNA
Length=91671
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 23416 TCAACAGCCAGCTC 23403
> gi|1013071131|ref|NR_111893.2| Homo sapiens contactin associated
protein-like 3 pseudogene 2 (CNTNAP3P2), non-coding RNA
Length=7649
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 2834 TCAACAGCCAGCTC 2847
> gi|1034672319|ref|XM_017015388.1| PREDICTED: Homo sapiens contactin-associated
protein-like 3B (LOC101930090), transcript
variant X1, partial mRNA
Length=2067
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 1319 TCAACAGCCAGCTC 1332
> gi|597955307|ref|NM_001201380.2| Homo sapiens contactin associated
protein-like 3B (CNTNAP3B), mRNA
Length=6379
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 3145 TCAACAGCCAGCTC 3158
> gi|117306179|ref|NM_033655.3| Homo sapiens contactin associated
protein-like 3 (CNTNAP3), mRNA
Length=5229
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 TCAACAGCCAGCTC 18
||||||||||||||
Sbjct 2974 TCAACAGCCAGCTC 2987
> gi|1034659587|ref|XM_011544440.2| PREDICTED: Homo sapiens exostosin
like glycosyltransferase 3 (EXTL3), transcript variant
X1, mRNA
Length=6116
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 TGGTCAACAGCCAG 15
||||||||||||||
Sbjct 312 TGGTCAACAGCCAG 325
> gi|425905356|ref|NR_073469.1| Homo sapiens exostosin like glycosyltransferase
3 (EXTL3), transcript variant 3, non-coding
RNA
Length=1804
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 TGGTCAACAGCCAG 15
||||||||||||||
Sbjct 536 TGGTCAACAGCCAG 549
> gi|425905351|ref|NM_001440.3| Homo sapiens exostosin like glycosyltransferase
3 (EXTL3), transcript variant 1, mRNA
Length=6351
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 TGGTCAACAGCCAG 15
||||||||||||||
Sbjct 536 TGGTCAACAGCCAG 549
> gi|282394048|ref|NM_207360.2| Homo sapiens zinc finger CCCH-type
containing 12D (ZC3H12D), mRNA
Length=4907
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 GTCAACAGCCAGCT 17
||||||||||||||
Sbjct 627 GTCAACAGCCAGCT 614
> gi|358438249|ref|NM_001177639.2| Homo sapiens dystroglycan 1
(DAG1), transcript variant 8, mRNA
Length=5384
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 1927 CAACAGCCAGCTCA 1940
> gi|358438227|ref|NM_001177635.2| Homo sapiens dystroglycan 1
(DAG1), transcript variant 4, mRNA
Length=5436
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 1979 CAACAGCCAGCTCA 1992
> gi|358438298|ref|NM_004393.5| Homo sapiens dystroglycan 1 (DAG1),
transcript variant 2, mRNA
Length=5543
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 2086 CAACAGCCAGCTCA 2099
> gi|358438270|ref|NM_001177641.2| Homo sapiens dystroglycan 1
(DAG1), transcript variant 10, mRNA
Length=5690
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 2233 CAACAGCCAGCTCA 2246
> gi|358438265|ref|NM_001177638.2| Homo sapiens dystroglycan 1
(DAG1), transcript variant 7, mRNA
Length=5694
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 2237 CAACAGCCAGCTCA 2250
> gi|358438242|ref|NM_001177637.2| Homo sapiens dystroglycan 1
(DAG1), transcript variant 6, mRNA
Length=5663
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 2206 CAACAGCCAGCTCA 2219
> gi|358438210|ref|NM_001165928.3| Homo sapiens dystroglycan 1
(DAG1), transcript variant 1, mRNA
Length=5904
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 2447 CAACAGCCAGCTCA 2460
> gi|358438238|ref|NM_001177636.2| Homo sapiens dystroglycan 1
(DAG1), transcript variant 5, mRNA
Length=5825
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 2368 CAACAGCCAGCTCA 2381
> gi|358438284|ref|NM_001177642.2| Homo sapiens dystroglycan 1
(DAG1), transcript variant 11, mRNA
Length=5595
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 2138 CAACAGCCAGCTCA 2151
> gi|358438256|ref|NM_001177640.2| Homo sapiens dystroglycan 1
(DAG1), transcript variant 9, mRNA
Length=5600
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 2143 CAACAGCCAGCTCA 2156
> gi|358438222|ref|NM_001177634.2| Homo sapiens dystroglycan 1
(DAG1), transcript variant 3, mRNA
Length=5847
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 2390 CAACAGCCAGCTCA 2403
> gi|358438291|ref|NM_001177644.2| Homo sapiens dystroglycan 1
(DAG1), transcript variant 13, mRNA
Length=5683
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 2226 CAACAGCCAGCTCA 2239
> gi|358438205|ref|NM_001177643.2| Homo sapiens dystroglycan 1
(DAG1), transcript variant 12, mRNA
Length=5594
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CAACAGCCAGCTCA 19
||||||||||||||
Sbjct 2137 CAACAGCCAGCTCA 2150
> gi|209977078|ref|NM_018254.3| Homo sapiens REST corepressor 3
(RCOR3), transcript variant 4, mRNA
Length=4274
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1596 GTGGTCAACAGCCA 1609
> gi|1034560098|ref|XR_921878.2| PREDICTED: Homo sapiens REST corepressor
3 (RCOR3), transcript variant X26, misc_RNA
Length=4227
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1913 GTGGTCAACAGCCA 1926
> gi|1034560083|ref|XM_017001766.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X13, mRNA
Length=4442
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 2124 GTGGTCAACAGCCA 2137
> gi|1034560070|ref|XM_011509748.2| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X5, mRNA
Length=4020
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1702 GTGGTCAACAGCCA 1715
> gi|1034560077|ref|XM_011509749.2| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X9, mRNA
Length=3798
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1480 GTGGTCAACAGCCA 1493
> gi|1034560082|ref|XM_006711442.2| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X12, mRNA
Length=3856
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1538 GTGGTCAACAGCCA 1551
> gi|1034560069|ref|XM_005273191.4| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X4, mRNA
Length=4098
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1780 GTGGTCAACAGCCA 1793
> gi|1034560065|ref|XM_017001759.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X2, mRNA
Length=4207
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1889 GTGGTCAACAGCCA 1902
> gi|1034560096|ref|XR_001737309.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X24, misc_RNA
Length=4283
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1965 GTGGTCAACAGCCA 1978
> gi|1034560099|ref|XR_001737311.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X27, misc_RNA
Length=4243
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1929 GTGGTCAACAGCCA 1942
> gi|1034560071|ref|XM_017001761.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X6, mRNA
Length=4036
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1718 GTGGTCAACAGCCA 1731
> gi|1034560078|ref|XM_017001764.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X10, mRNA
Length=3814
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1496 GTGGTCAACAGCCA 1509
> gi|256818747|ref|NM_001136224.2| Homo sapiens REST corepressor
3 (RCOR3), transcript variant 2, mRNA
Length=4232
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1554 GTGGTCAACAGCCA 1567
> gi|209977079|ref|NM_001136223.1| Homo sapiens REST corepressor
3 (RCOR3), transcript variant 1, mRNA
Length=4474
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1796 GTGGTCAACAGCCA 1809
> gi|1034560086|ref|XR_001737301.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X15, misc_RNA
Length=4361
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 2047 GTGGTCAACAGCCA 2060
> gi|1034560080|ref|XM_017001765.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X11, mRNA
Length=3912
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1594 GTGGTCAACAGCCA 1607
> gi|1034560067|ref|XM_017001760.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X3, mRNA
Length=4154
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1836 GTGGTCAACAGCCA 1849
> gi|1034560097|ref|XR_001737310.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X25, misc_RNA
Length=4519
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 2201 GTGGTCAACAGCCA 2214
> gi|1034560073|ref|XM_017001762.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X7, mRNA
Length=3932
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1614 GTGGTCAACAGCCA 1627
> gi|1034560075|ref|XM_017001763.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X8, mRNA
Length=3990
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1672 GTGGTCAACAGCCA 1685
> gi|1034560063|ref|XM_017001758.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X1, mRNA
Length=4232
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1914 GTGGTCAACAGCCA 1927
> gi|1034560085|ref|XR_001737300.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X14, misc_RNA
Length=4597
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 2279 GTGGTCAACAGCCA 2292
> gi|1034560089|ref|XR_001737304.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X18, misc_RNA
Length=4266
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1948 GTGGTCAACAGCCA 1961
> gi|1034560088|ref|XR_001737303.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X17, misc_RNA
Length=4399
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 2081 GTGGTCAACAGCCA 2094
> gi|1034560087|ref|XR_001737302.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X16, misc_RNA
Length=4631
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 2313 GTGGTCAACAGCCA 2326
> gi|1034560093|ref|XR_001737306.1| PREDICTED: Homo sapiens REST
corepressor 3 (RCOR3), transcript variant X21, misc_RNA
Length=4308
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GTGGTCAACAGCCA 14
||||||||||||||
Sbjct 1990 GTGGTCAACAGCCA 2003
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 1752885255
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2