BLASTN 2.4.0+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Database: rna.fa
           176,426 sequences; 587,117,901 total letters



Query= GTGGACATCCGCAAAGAC (evalue = 10)

Length=18
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  gi|582015222|ref|NR_110456.1| Homo sapiens KDM5C adjacent non-c...  36.2    0.023
  gi|1034689602|ref|XM_017012144.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034689604|ref|XM_017012145.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034689606|ref|XM_017012146.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|316659408|ref|NM_001199954.1| Homo sapiens actin gamma 1 (AC...  36.2    0.023
  gi|316659407|ref|NM_001614.3| Homo sapiens actin gamma 1 (ACTG1...  36.2    0.023
  gi|316659410|ref|NR_037688.1| Homo sapiens actin gamma 1 (ACTG1...  36.2    0.023
  gi|168480144|ref|NM_001101.3| Homo sapiens actin, beta (ACTB), ...  36.2    0.023
  gi|1034614130|ref|XM_017004160.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|134133225|ref|NM_001083538.1| Homo sapiens POTE ankyrin doma...  36.2    0.023
  gi|1034614129|ref|XM_011511216.2| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034614127|ref|XM_017004159.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034614132|ref|XM_017004161.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034616020|ref|XM_017004743.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034616018|ref|XM_017004742.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|459352729|ref|NM_001277083.1| Homo sapiens POTE ankyrin doma...  36.2    0.023
  gi|1034616015|ref|XM_011511683.2| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034616016|ref|XM_017004741.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|475808426|ref|NM_001277406.1| Homo sapiens POTE ankyrin doma...  36.2    0.023
  gi|1034615986|ref|XM_017004734.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034615984|ref|XM_017004733.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034615981|ref|XM_011511670.2| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034615982|ref|XM_017004732.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034615988|ref|XM_017004735.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034616317|ref|XM_017004835.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034616315|ref|XM_017004834.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|1034616313|ref|XM_017004833.1| PREDICTED: Homo sapiens POTE ...  36.2    0.023
  gi|256222517|ref|NM_001099771.2| Homo sapiens POTE ankyrin doma...  36.2    0.023
  gi|219802466|ref|NR_024438.2| Homo sapiens actin gamma 1 pseudo...  36.2    0.023
  gi|768017641|ref|XM_011528913.1| PREDICTED: Homo sapiens sulfat...  30.2    1.4  
  gi|1034625457|ref|XM_017027955.1| PREDICTED: Homo sapiens sulfa...  30.2    1.4  
  gi|299890836|ref|NR_033926.1| Homo sapiens actin gamma 1 pseudo...  30.2    1.4  
  gi|1034594126|ref|XR_001751878.1| PREDICTED: Homo sapiens mahog...  28.2    5.5  
  gi|1034594127|ref|XR_001751879.1| PREDICTED: Homo sapiens mahog...  28.2    5.5  
  gi|1034594119|ref|XM_017023091.1| PREDICTED: Homo sapiens mahog...  28.2    5.5  
  gi|767987083|ref|XM_005255221.3| PREDICTED: Homo sapiens mahogu...  28.2    5.5  
  gi|767987080|ref|XM_005255220.3| PREDICTED: Homo sapiens mahogu...  28.2    5.5  
  gi|1034594121|ref|XM_017023092.1| PREDICTED: Homo sapiens mahog...  28.2    5.5  
  gi|767987079|ref|XM_005255219.3| PREDICTED: Homo sapiens mahogu...  28.2    5.5  
  gi|456367266|ref|NR_102267.1| Homo sapiens mahogunin ring finge...  28.2    5.5  
  gi|334883177|ref|NM_001142289.2| Homo sapiens mahogunin ring fi...  28.2    5.5  
  gi|334883181|ref|NM_001142291.2| Homo sapiens mahogunin ring fi...  28.2    5.5  
  gi|334883176|ref|NM_015246.3| Homo sapiens mahogunin ring finge...  28.2    5.5  
  gi|334883179|ref|NM_001142290.2| Homo sapiens mahogunin ring fi...  28.2    5.5  
  gi|530407837|ref|XM_005255218.1| PREDICTED: Homo sapiens mahogu...  28.2    5.5  
  gi|530407835|ref|XM_005255217.1| PREDICTED: Homo sapiens mahogu...  28.2    5.5  
  gi|1034594123|ref|XM_017023093.1| PREDICTED: Homo sapiens mahog...  28.2    5.5  
  gi|767987081|ref|XM_011522441.1| PREDICTED: Homo sapiens mahogu...  28.2    5.5  
  gi|224282146|ref|NM_001145442.1| Homo sapiens POTE ankyrin doma...  28.2    5.5  
  gi|51093829|ref|NM_001003398.1| Homo sapiens BICD cargo adaptor...  28.2    5.5  
  gi|51039801|ref|NM_001714.2| Homo sapiens BICD cargo adaptor 1 ...  28.2    5.5  
  gi|767972311|ref|XM_005253466.2| PREDICTED: Homo sapiens BICD c...  28.2    5.5  
  gi|1034581084|ref|XM_005253465.3| PREDICTED: Homo sapiens BICD ...  28.2    5.5  
  gi|1034581081|ref|XM_011520815.2| PREDICTED: Homo sapiens BICD ...  28.2    5.5  
  gi|767972300|ref|XM_011520813.1| PREDICTED: Homo sapiens BICD c...  28.2    5.5  
  gi|1034581085|ref|XM_006719134.3| PREDICTED: Homo sapiens BICD ...  28.2    5.5  
  gi|1034581083|ref|XR_242898.3| PREDICTED: Homo sapiens BICD car...  28.2    5.5  
  gi|1034581082|ref|XM_011520816.2| PREDICTED: Homo sapiens BICD ...  28.2    5.5  
  gi|1034581077|ref|XM_011520812.2| PREDICTED: Homo sapiens BICD ...  28.2    5.5  
  gi|1034581080|ref|XM_011520814.2| PREDICTED: Homo sapiens BICD ...  28.2    5.5  
  gi|1034581078|ref|XM_017019797.1| PREDICTED: Homo sapiens BICD ...  28.2    5.5  
  gi|557440851|ref|NM_001286576.1| Homo sapiens armadillo repeat ...  28.2    5.5  
  gi|557440859|ref|NM_001286574.1| Homo sapiens armadillo repeat ...  28.2    5.5  
  gi|557440866|ref|NM_145028.4| Homo sapiens armadillo repeat con...  28.2    5.5  
  gi|1034649018|ref|XM_011514382.2| PREDICTED: Homo sapiens armad...  28.2    5.5  
  gi|1034649015|ref|XM_017010435.1| PREDICTED: Homo sapiens armad...  28.2    5.5  
  gi|767933069|ref|XM_005263352.3| PREDICTED: Homo sapiens tRNA m...  28.2    5.5  
  gi|767933068|ref|XM_006714417.2| PREDICTED: Homo sapiens tRNA m...  28.2    5.5  
  gi|197927259|ref|NM_152292.4| Homo sapiens tRNA methyltransfera...  28.2    5.5  
  gi|698043595|ref|NM_001134665.2| Homo sapiens tRNA methyltransf...  28.2    5.5  
  gi|698043592|ref|NM_001134666.2| Homo sapiens tRNA methyltransf...  28.2    5.5  


> gi|582015222|ref|NR_110456.1| Homo sapiens KDM5C adjacent non-coding 
transcript (KANTR), long non-coding RNA
Length=2428

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Minus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1416  GTGGACATCCGCAAAGAC  1399


> gi|1034689602|ref|XM_017012144.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member I (POTEI), transcript variant 
X6, mRNA
Length=2583

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1743  GTGGACATCCGCAAAGAC  1760


> gi|1034689604|ref|XM_017012145.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member I (POTEI), transcript variant 
X4, mRNA
Length=2672

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1832  GTGGACATCCGCAAAGAC  1849


> gi|1034689606|ref|XM_017012146.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member I (POTEI), transcript variant 
X5, mRNA
Length=1584

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1    GTGGACATCCGCAAAGAC  18
            ||||||||||||||||||
Sbjct  744  GTGGACATCCGCAAAGAC  761


> gi|316659408|ref|NM_001199954.1| Homo sapiens actin gamma 1 (ACTG1), 
transcript variant 1, mRNA
Length=2123

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1117  GTGGACATCCGCAAAGAC  1134


> gi|316659407|ref|NM_001614.3| Homo sapiens actin gamma 1 (ACTG1), 
transcript variant 2, mRNA
Length=2004

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  998   GTGGACATCCGCAAAGAC  1015


> gi|316659410|ref|NR_037688.1| Homo sapiens actin gamma 1 (ACTG1), 
transcript variant 3, non-coding RNA
Length=1855

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  998   GTGGACATCCGCAAAGAC  1015


> gi|168480144|ref|NM_001101.3| Homo sapiens actin, beta (ACTB), 
mRNA
Length=1852

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1    GTGGACATCCGCAAAGAC  18
            ||||||||||||||||||
Sbjct  943  GTGGACATCCGCAAAGAC  960


> gi|1034614130|ref|XM_017004160.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member E (POTEE), transcript variant 
X3, mRNA
Length=2574

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1734  GTGGACATCCGCAAAGAC  1751


> gi|134133225|ref|NM_001083538.1| Homo sapiens POTE ankyrin domain 
family member E (POTEE), mRNA
Length=3440

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  3011  GTGGACATCCGCAAAGAC  3028


> gi|1034614129|ref|XM_011511216.2| PREDICTED: Homo sapiens POTE 
ankyrin domain family member E (POTEE), transcript variant 
X2, mRNA
Length=3575

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  2735  GTGGACATCCGCAAAGAC  2752


> gi|1034614127|ref|XM_017004159.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member E (POTEE), transcript variant 
X1, mRNA
Length=3606

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  2766  GTGGACATCCGCAAAGAC  2783


> gi|1034614132|ref|XM_017004161.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member E (POTEE), transcript variant 
X4, mRNA
Length=4288

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  3448  GTGGACATCCGCAAAGAC  3465


> gi|1034616020|ref|XM_017004743.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member J (POTEJ), transcript variant 
X4, mRNA
Length=2628

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1788  GTGGACATCCGCAAAGAC  1805


> gi|1034616018|ref|XM_017004742.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member J (POTEJ), transcript variant 
X3, mRNA
Length=2696

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1856  GTGGACATCCGCAAAGAC  1873


> gi|459352729|ref|NM_001277083.1| Homo sapiens POTE ankyrin domain 
family member J (POTEJ), mRNA
Length=3277

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  2848  GTGGACATCCGCAAAGAC  2865


> gi|1034616015|ref|XM_011511683.2| PREDICTED: Homo sapiens POTE 
ankyrin domain family member J (POTEJ), transcript variant 
X1, mRNA
Length=3860

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  3020  GTGGACATCCGCAAAGAC  3037


> gi|1034616016|ref|XM_017004741.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member J (POTEJ), transcript variant 
X2, mRNA
Length=3833

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  2993  GTGGACATCCGCAAAGAC  3010


> gi|475808426|ref|NM_001277406.1| Homo sapiens POTE ankyrin domain 
family member I (POTEI), mRNA
Length=3228

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  2959  GTGGACATCCGCAAAGAC  2976


> gi|1034615986|ref|XM_017004734.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member I (POTEI), transcript variant 
X4, mRNA
Length=2633

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1793  GTGGACATCCGCAAAGAC  1810


> gi|1034615984|ref|XM_017004733.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member I (POTEI), transcript variant 
X3, mRNA
Length=2696

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1856  GTGGACATCCGCAAAGAC  1873


> gi|1034615981|ref|XM_011511670.2| PREDICTED: Homo sapiens POTE 
ankyrin domain family member I (POTEI), transcript variant 
X1, mRNA
Length=3971

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  3131  GTGGACATCCGCAAAGAC  3148


> gi|1034615982|ref|XM_017004732.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member I (POTEI), transcript variant 
X2, mRNA
Length=3950

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  3110  GTGGACATCCGCAAAGAC  3127


> gi|1034615988|ref|XM_017004735.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member I (POTEI), transcript variant 
X5, mRNA
Length=1593

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1    GTGGACATCCGCAAAGAC  18
            ||||||||||||||||||
Sbjct  753  GTGGACATCCGCAAAGAC  770


> gi|1034616317|ref|XM_017004835.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member F (POTEF), transcript variant 
X3, mRNA
Length=2633

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1793  GTGGACATCCGCAAAGAC  1810


> gi|1034616315|ref|XM_017004834.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member F (POTEF), transcript variant 
X2, mRNA
Length=2696

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1856  GTGGACATCCGCAAAGAC  1873


> gi|1034616313|ref|XM_017004833.1| PREDICTED: Homo sapiens POTE 
ankyrin domain family member F (POTEF), transcript variant 
X1, mRNA
Length=3974

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  3134  GTGGACATCCGCAAAGAC  3151


> gi|256222517|ref|NM_001099771.2| Homo sapiens POTE ankyrin domain 
family member F (POTEF), mRNA
Length=4337

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  3359  GTGGACATCCGCAAAGAC  3376


> gi|219802466|ref|NR_024438.2| Homo sapiens actin gamma 1 pseudogene 
4 (ACTG1P4), non-coding RNA
Length=1988

 Score = 36.2 bits (18),  Expect = 0.023
 Identities = 18/18 (100%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             ||||||||||||||||||
Sbjct  1005  GTGGACATCCGCAAAGAC  1022


> gi|768017641|ref|XM_011528913.1| PREDICTED: Homo sapiens sulfatase 
2 (SULF2), transcript variant X4, mRNA
Length=3884

 Score = 30.2 bits (15),  Expect = 1.4
 Identities = 15/15 (100%), Gaps = 0/15 (0%)
 Strand=Plus/Plus

Query  3    GGACATCCGCAAAGA  17
            |||||||||||||||
Sbjct  172  GGACATCCGCAAAGA  186


> gi|1034625457|ref|XM_017027955.1| PREDICTED: Homo sapiens sulfatase 
2 (SULF2), transcript variant X7, mRNA
Length=6708

 Score = 30.2 bits (15),  Expect = 1.4
 Identities = 15/15 (100%), Gaps = 0/15 (0%)
 Strand=Plus/Plus

Query  3    GGACATCCGCAAAGA  17
            |||||||||||||||
Sbjct  177  GGACATCCGCAAAGA  191


> gi|299890836|ref|NR_033926.1| Homo sapiens actin gamma 1 pseudogene 
20 (ACTG1P20), non-coding RNA
Length=2652

 Score = 30.2 bits (15),  Expect = 1.4
 Identities = 15/15 (100%), Gaps = 0/15 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGAC  18
             |||||||||||||||
Sbjct  1657  GACATCCGCAAAGAC  1671


> gi|1034594126|ref|XR_001751878.1| PREDICTED: Homo sapiens mahogunin 
ring finger 1 (MGRN1), transcript variant X11, misc_RNA
Length=1582

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|1034594127|ref|XR_001751879.1| PREDICTED: Homo sapiens mahogunin 
ring finger 1 (MGRN1), transcript variant X12, misc_RNA
Length=1624

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|1034594119|ref|XM_017023091.1| PREDICTED: Homo sapiens mahogunin 
ring finger 1 (MGRN1), transcript variant X4, mRNA
Length=2911

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|767987083|ref|XM_005255221.3| PREDICTED: Homo sapiens mahogunin 
ring finger 1 (MGRN1), transcript variant X8, mRNA
Length=1823

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|767987080|ref|XM_005255220.3| PREDICTED: Homo sapiens mahogunin 
ring finger 1 (MGRN1), transcript variant X5, mRNA
Length=1889

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|1034594121|ref|XM_017023092.1| PREDICTED: Homo sapiens mahogunin 
ring finger 1 (MGRN1), transcript variant X7, mRNA
Length=1826

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|767987079|ref|XM_005255219.3| PREDICTED: Homo sapiens mahogunin 
ring finger 1 (MGRN1), transcript variant X3, mRNA
Length=1892

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|456367266|ref|NR_102267.1| Homo sapiens mahogunin ring finger 
1 (MGRN1), transcript variant 5, non-coding RNA
Length=3758

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|334883177|ref|NM_001142289.2| Homo sapiens mahogunin ring 
finger 1 (MGRN1), transcript variant 2, mRNA
Length=3868

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|334883181|ref|NM_001142291.2| Homo sapiens mahogunin ring 
finger 1 (MGRN1), transcript variant 4, mRNA
Length=6405

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|334883176|ref|NM_015246.3| Homo sapiens mahogunin ring finger 
1 (MGRN1), transcript variant 1, mRNA
Length=3934

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|334883179|ref|NM_001142290.2| Homo sapiens mahogunin ring 
finger 1 (MGRN1), transcript variant 3, mRNA
Length=6471

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|530407837|ref|XM_005255218.1| PREDICTED: Homo sapiens mahogunin 
ring finger 1 (MGRN1), transcript variant X2, mRNA
Length=3871

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|530407835|ref|XM_005255217.1| PREDICTED: Homo sapiens mahogunin 
ring finger 1 (MGRN1), transcript variant X1, mRNA
Length=3937

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  403  ACATCCGCAAAGAC  416


> gi|1034594123|ref|XM_017023093.1| PREDICTED: Homo sapiens mahogunin 
ring finger 1 (MGRN1), transcript variant X9, mRNA
Length=1747

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  261  ACATCCGCAAAGAC  274


> gi|767987081|ref|XM_011522441.1| PREDICTED: Homo sapiens mahogunin 
ring finger 1 (MGRN1), transcript variant X6, mRNA
Length=3795

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5    ACATCCGCAAAGAC  18
            ||||||||||||||
Sbjct  261  ACATCCGCAAAGAC  274


> gi|224282146|ref|NM_001145442.1| Homo sapiens POTE ankyrin domain 
family member M (POTEM), mRNA
Length=6666

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 17/18 (94%), Gaps = 0/18 (0%)
 Strand=Plus/Plus

Query  1     GTGGACATCCGCAAAGAC  18
             |||||||||| |||||||
Sbjct  2640  GTGGACATCCACAAAGAC  2657


> gi|51093829|ref|NM_001003398.1| Homo sapiens BICD cargo adaptor 
1 (BICD1), transcript variant 2, mRNA
Length=3285

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  1930  GACATCCGCAAAGA  1943


> gi|51039801|ref|NM_001714.2| Homo sapiens BICD cargo adaptor 
1 (BICD1), transcript variant 1, mRNA
Length=3589

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  1930  GACATCCGCAAAGA  1943


> gi|767972311|ref|XM_005253466.2| PREDICTED: Homo sapiens BICD 
cargo adaptor 1 (BICD1), transcript variant X10, mRNA
Length=3432

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  2445  GACATCCGCAAAGA  2458


> gi|1034581084|ref|XM_005253465.3| PREDICTED: Homo sapiens BICD 
cargo adaptor 1 (BICD1), transcript variant X8, mRNA
Length=6178

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  2445  GACATCCGCAAAGA  2458


> gi|1034581081|ref|XM_011520815.2| PREDICTED: Homo sapiens BICD 
cargo adaptor 1 (BICD1), transcript variant X5, mRNA
Length=4901

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  2445  GACATCCGCAAAGA  2458


> gi|767972300|ref|XM_011520813.1| PREDICTED: Homo sapiens BICD 
cargo adaptor 1 (BICD1), transcript variant X3, mRNA
Length=3763

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  2445  GACATCCGCAAAGA  2458


> gi|1034581085|ref|XM_006719134.3| PREDICTED: Homo sapiens BICD 
cargo adaptor 1 (BICD1), transcript variant X9, mRNA
Length=3463

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  2445  GACATCCGCAAAGA  2458


> gi|1034581083|ref|XR_242898.3| PREDICTED: Homo sapiens BICD cargo 
adaptor 1 (BICD1), transcript variant X7, misc_RNA
Length=5543

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  2445  GACATCCGCAAAGA  2458


> gi|1034581082|ref|XM_011520816.2| PREDICTED: Homo sapiens BICD 
cargo adaptor 1 (BICD1), transcript variant X6, mRNA
Length=9240

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  2445  GACATCCGCAAAGA  2458


> gi|1034581077|ref|XM_011520812.2| PREDICTED: Homo sapiens BICD 
cargo adaptor 1 (BICD1), transcript variant X1, mRNA
Length=9458

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  2445  GACATCCGCAAAGA  2458


> gi|1034581080|ref|XM_011520814.2| PREDICTED: Homo sapiens BICD 
cargo adaptor 1 (BICD1), transcript variant X4, mRNA
Length=9544

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  2445  GACATCCGCAAAGA  2458


> gi|1034581078|ref|XM_017019797.1| PREDICTED: Homo sapiens BICD 
cargo adaptor 1 (BICD1), transcript variant X2, mRNA
Length=9543

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  4     GACATCCGCAAAGA  17
             ||||||||||||||
Sbjct  2445  GACATCCGCAAAGA  2458


> gi|557440851|ref|NM_001286576.1| Homo sapiens armadillo repeat 
containing 12 (ARMC12), transcript variant 3, mRNA
Length=1120

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2    TGGACATCCGCAAA  15
            ||||||||||||||
Sbjct  112  TGGACATCCGCAAA  125


> gi|557440859|ref|NM_001286574.1| Homo sapiens armadillo repeat 
containing 12 (ARMC12), transcript variant 2, mRNA
Length=1150

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2    TGGACATCCGCAAA  15
            ||||||||||||||
Sbjct  112  TGGACATCCGCAAA  125


> gi|557440866|ref|NM_145028.4| Homo sapiens armadillo repeat containing 
12 (ARMC12), transcript variant 1, mRNA
Length=1231

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2    TGGACATCCGCAAA  15
            ||||||||||||||
Sbjct  112  TGGACATCCGCAAA  125


> gi|1034649018|ref|XM_011514382.2| PREDICTED: Homo sapiens armadillo 
repeat containing 12 (ARMC12), transcript variant X3, 
mRNA
Length=1223

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2    TGGACATCCGCAAA  15
            ||||||||||||||
Sbjct  164  TGGACATCCGCAAA  177


> gi|1034649015|ref|XM_017010435.1| PREDICTED: Homo sapiens armadillo 
repeat containing 12 (ARMC12), transcript variant X1, 
mRNA
Length=2698

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  2     TGGACATCCGCAAA  15
             ||||||||||||||
Sbjct  1586  TGGACATCCGCAAA  1599


> gi|767933069|ref|XM_005263352.3| PREDICTED: Homo sapiens tRNA 
methyltransferase 10A (TRMT10A), transcript variant X2, mRNA
Length=3546

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5     ACATCCGCAAAGAC  18
             ||||||||||||||
Sbjct  3187  ACATCCGCAAAGAC  3200


> gi|767933068|ref|XM_006714417.2| PREDICTED: Homo sapiens tRNA 
methyltransferase 10A (TRMT10A), transcript variant X1, mRNA
Length=3588

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5     ACATCCGCAAAGAC  18
             ||||||||||||||
Sbjct  3229  ACATCCGCAAAGAC  3242


> gi|197927259|ref|NM_152292.4| Homo sapiens tRNA methyltransferase 
10A (TRMT10A), transcript variant 1, mRNA
Length=3722

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5     ACATCCGCAAAGAC  18
             ||||||||||||||
Sbjct  3353  ACATCCGCAAAGAC  3366


> gi|698043595|ref|NM_001134665.2| Homo sapiens tRNA methyltransferase 
10A (TRMT10A), transcript variant 2, mRNA
Length=3577

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5     ACATCCGCAAAGAC  18
             ||||||||||||||
Sbjct  3208  ACATCCGCAAAGAC  3221


> gi|698043592|ref|NM_001134666.2| Homo sapiens tRNA methyltransferase 
10A (TRMT10A), transcript variant 3, mRNA
Length=3566

 Score = 28.2 bits (14),  Expect = 5.5
 Identities = 14/14 (100%), Gaps = 0/14 (0%)
 Strand=Plus/Plus

Query  5     ACATCCGCAAAGAC  18
             ||||||||||||||
Sbjct  3197  ACATCCGCAAAGAC  3210



Lambda      K        H
    1.37    0.711     1.31 

Gapped
Lambda      K        H
    1.37    0.711     1.31 

Effective search space used: 1753414533


  Database: rna.fa
    Posted date:  Jan 6, 2017  3:58 PM
  Number of letters in database: 587,117,901
  Number of sequences in database:  176,426



Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2