BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= GGGCATCTTCACGCTCTATTT (evalue = 10)
Length=21
Score E
Sequences producing significant alignments: (Bits) Value
gi|166197663|ref|NM_001237.3| Homo sapiens cyclin A2 (CCNA2), mRNA 42.1 6e-04
gi|1034571837|ref|XM_011542567.2| PREDICTED: Homo sapiens galac... 28.2 9.2
gi|321400108|ref|NM_181552.3| Homo sapiens cut like homeobox 1 ... 28.2 9.2
gi|1034654177|ref|XM_011515823.2| PREDICTED: Homo sapiens cut l... 28.2 9.2
gi|1034654174|ref|XM_006715854.2| PREDICTED: Homo sapiens cut l... 28.2 9.2
gi|1034654172|ref|XM_005250150.2| PREDICTED: Homo sapiens cut l... 28.2 9.2
gi|1034654178|ref|XM_017011760.1| PREDICTED: Homo sapiens cut l... 28.2 9.2
gi|767946887|ref|XM_011515825.1| PREDICTED: Homo sapiens cut li... 28.2 9.2
gi|321400106|ref|NM_001202543.1| Homo sapiens cut like homeobox... 28.2 9.2
gi|1034634113|ref|XM_017006694.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634070|ref|XM_017006674.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634065|ref|XM_017006672.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634095|ref|XM_017006685.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634093|ref|XM_017006684.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634091|ref|XM_017006683.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634089|ref|XM_017006682.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634087|ref|XM_017006681.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634063|ref|XM_017006671.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634105|ref|XM_017006690.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634099|ref|XM_017006687.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634097|ref|XM_017006686.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634103|ref|XM_017006689.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634101|ref|XM_017006688.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634068|ref|XM_017006673.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634121|ref|XM_017006698.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634119|ref|XM_017006697.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634115|ref|XM_017006695.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634109|ref|XM_017006692.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634111|ref|XM_017006693.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634117|ref|XM_017006696.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634107|ref|XM_017006691.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634131|ref|XM_017006703.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634127|ref|XM_017006701.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634129|ref|XM_017006702.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634133|ref|XM_017006704.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634080|ref|XM_017006678.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634086|ref|XR_001740187.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634067|ref|XM_005265252.4| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634082|ref|XM_017006679.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634084|ref|XM_017006680.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634074|ref|XM_005265255.3| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634075|ref|XM_017006676.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634072|ref|XM_017006675.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634077|ref|XM_005265256.3| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634062|ref|XM_005265250.4| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634078|ref|XM_017006677.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|574272304|ref|NM_001289101.1| Homo sapiens PX domain contain... 28.2 9.2
gi|574269958|ref|NM_001289096.1| Homo sapiens PX domain contain... 28.2 9.2
gi|574271316|ref|NM_001289100.1| Homo sapiens PX domain contain... 28.2 9.2
gi|574269522|ref|NM_001289095.1| Homo sapiens PX domain contain... 28.2 9.2
gi|574272532|ref|NM_001289099.1| Homo sapiens PX domain contain... 28.2 9.2
gi|574271714|ref|NM_017771.4| Homo sapiens PX domain containing... 28.2 9.2
gi|574273241|ref|NM_001289098.1| Homo sapiens PX domain contain... 28.2 9.2
gi|1034634123|ref|XM_017006699.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|1034634125|ref|XM_017006700.1| PREDICTED: Homo sapiens PX do... 28.2 9.2
gi|111160871|ref|NM_003468.3| Homo sapiens frizzled class recep... 28.2 9.2
gi|63477961|ref|NM_000911.3| Homo sapiens opioid receptor delta... 28.2 9.2
gi|1034681191|ref|XR_001731687.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034625203|ref|XM_011528856.2| PREDICTED: Homo sapiens CDK5 ... 28.2 9.2
gi|574288966|ref|NR_110310.1| Homo sapiens family with sequence... 28.2 9.2
gi|574286783|ref|NM_032231.5| Homo sapiens family with sequence... 28.2 9.2
gi|574286888|ref|NM_001289108.1| Homo sapiens family with seque... 28.2 9.2
gi|574286784|ref|NM_001014812.2| Homo sapiens family with seque... 28.2 9.2
gi|1034588572|ref|XM_017021779.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588591|ref|XR_001750597.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588560|ref|XM_017021773.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588570|ref|XM_017021778.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588546|ref|XM_017021766.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588566|ref|XM_017021776.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588549|ref|XM_017021767.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588543|ref|XM_011537337.2| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588541|ref|XM_011537335.2| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588589|ref|XR_001750596.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588592|ref|XM_006720320.3| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588585|ref|XM_011537356.2| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588580|ref|XM_011537352.2| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|334848134|ref|NM_001242416.1| Homo sapiens WD repeat domain ... 28.2 9.2
gi|992068357|ref|NM_001320130.1| Homo sapiens WD repeat domain ... 28.2 9.2
gi|334848129|ref|NM_181291.2| Homo sapiens WD repeat domain 20 ... 28.2 9.2
gi|1034588564|ref|XM_017021775.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588556|ref|XM_017021771.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588586|ref|XM_017021784.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588551|ref|XM_017021768.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034588568|ref|XM_017021777.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|1034576688|ref|XR_001748138.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
> gi|166197663|ref|NM_001237.3| Homo sapiens cyclin A2 (CCNA2),
mRNA
Length=2811
Score = 42.1 bits (21), Expect = 6e-04
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGCTCTATTT 21
|||||||||||||||||||||
Sbjct 681 GGGCATCTTCACGCTCTATTT 661
> gi|1034571837|ref|XM_011542567.2| PREDICTED: Homo sapiens galactosidase
beta 1 like 3 (GLB1L3), transcript variant X2, mRNA
Length=3277
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 CATCTTCACGCTCT 17
||||||||||||||
Sbjct 2875 CATCTTCACGCTCT 2888
> gi|321400108|ref|NM_181552.3| Homo sapiens cut like homeobox
1 (CUX1), transcript variant 1, mRNA
Length=13760
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 TCTTCACGCTCTAT 19
||||||||||||||
Sbjct 7911 TCTTCACGCTCTAT 7924
> gi|1034654177|ref|XM_011515823.2| PREDICTED: Homo sapiens cut
like homeobox 1 (CUX1), transcript variant X5, mRNA
Length=13960
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 TCTTCACGCTCTAT 19
||||||||||||||
Sbjct 8124 TCTTCACGCTCTAT 8137
> gi|1034654174|ref|XM_006715854.2| PREDICTED: Homo sapiens cut
like homeobox 1 (CUX1), transcript variant X3, mRNA
Length=14202
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 TCTTCACGCTCTAT 19
||||||||||||||
Sbjct 8366 TCTTCACGCTCTAT 8379
> gi|1034654172|ref|XM_005250150.2| PREDICTED: Homo sapiens cut
like homeobox 1 (CUX1), transcript variant X1, mRNA
Length=14265
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 TCTTCACGCTCTAT 19
||||||||||||||
Sbjct 8429 TCTTCACGCTCTAT 8442
> gi|1034654178|ref|XM_017011760.1| PREDICTED: Homo sapiens cut
like homeobox 1 (CUX1), transcript variant X6, mRNA
Length=13762
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 TCTTCACGCTCTAT 19
||||||||||||||
Sbjct 7926 TCTTCACGCTCTAT 7939
> gi|767946887|ref|XM_011515825.1| PREDICTED: Homo sapiens cut
like homeobox 1 (CUX1), transcript variant X7, mRNA
Length=13528
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 TCTTCACGCTCTAT 19
||||||||||||||
Sbjct 7692 TCTTCACGCTCTAT 7705
> gi|321400106|ref|NM_001202543.1| Homo sapiens cut like homeobox
1 (CUX1), transcript variant 4, mRNA
Length=13882
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 TCTTCACGCTCTAT 19
||||||||||||||
Sbjct 8033 TCTTCACGCTCTAT 8046
> gi|1034634113|ref|XM_017006694.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X29, mRNA
Length=2767
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1003 GGGCATCTTCACGC 1016
> gi|1034634070|ref|XM_017006674.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X6, mRNA
Length=2520
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 849 GGGCATCTTCACGC 862
> gi|1034634065|ref|XM_017006672.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X3, mRNA
Length=2580
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 849 GGGCATCTTCACGC 862
> gi|1034634095|ref|XM_017006685.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X20, mRNA
Length=2644
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 849 GGGCATCTTCACGC 862
> gi|1034634093|ref|XM_017006684.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X19, mRNA
Length=2613
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 849 GGGCATCTTCACGC 862
> gi|1034634091|ref|XM_017006683.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X18, mRNA
Length=6796
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 849 GGGCATCTTCACGC 862
> gi|1034634089|ref|XM_017006682.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X17, mRNA
Length=2613
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 849 GGGCATCTTCACGC 862
> gi|1034634087|ref|XM_017006681.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X16, mRNA
Length=2616
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 849 GGGCATCTTCACGC 862
> gi|1034634063|ref|XM_017006671.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X2, mRNA
Length=2790
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 849 GGGCATCTTCACGC 862
> gi|1034634105|ref|XM_017006690.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X25, mRNA
Length=2610
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 815 GGGCATCTTCACGC 828
> gi|1034634099|ref|XM_017006687.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X22, mRNA
Length=2801
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1070 GGGCATCTTCACGC 1083
> gi|1034634097|ref|XM_017006686.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X21, mRNA
Length=2806
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1072 GGGCATCTTCACGC 1085
> gi|1034634103|ref|XM_017006689.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X24, mRNA
Length=2588
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 824 GGGCATCTTCACGC 837
> gi|1034634101|ref|XM_017006688.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X23, mRNA
Length=2635
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 834 GGGCATCTTCACGC 847
> gi|1034634068|ref|XM_017006673.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X5, mRNA
Length=2581
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 850 GGGCATCTTCACGC 863
> gi|1034634121|ref|XM_017006698.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X33, mRNA
Length=2465
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 664 GGGCATCTTCACGC 677
> gi|1034634119|ref|XM_017006697.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X32, mRNA
Length=2433
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 666 GGGCATCTTCACGC 679
> gi|1034634115|ref|XM_017006695.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X30, mRNA
Length=2873
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1109 GGGCATCTTCACGC 1122
> gi|1034634109|ref|XM_017006692.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X27, mRNA
Length=2876
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1109 GGGCATCTTCACGC 1122
> gi|1034634111|ref|XM_017006693.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X28, mRNA
Length=2910
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1109 GGGCATCTTCACGC 1122
> gi|1034634117|ref|XM_017006696.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X31, mRNA
Length=2342
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 671 GGGCATCTTCACGC 684
> gi|1034634107|ref|XM_017006691.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X26, mRNA
Length=2402
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 671 GGGCATCTTCACGC 684
> gi|1034634131|ref|XM_017006703.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X38, mRNA
Length=2432
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 671 GGGCATCTTCACGC 684
> gi|1034634127|ref|XM_017006701.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X36, mRNA
Length=2435
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 671 GGGCATCTTCACGC 684
> gi|1034634129|ref|XM_017006702.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X37, mRNA
Length=2469
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 671 GGGCATCTTCACGC 684
> gi|1034634133|ref|XM_017006704.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X39, mRNA
Length=2673
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 671 GGGCATCTTCACGC 684
> gi|1034634080|ref|XM_017006678.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X12, mRNA
Length=6378
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|1034634086|ref|XR_001740187.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X15, misc_RNA
Length=2206
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|1034634067|ref|XM_005265252.4| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X4, mRNA
Length=2629
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|1034634082|ref|XM_017006679.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X13, mRNA
Length=2719
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|1034634084|ref|XM_017006680.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X14, mRNA
Length=2753
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|1034634074|ref|XM_005265255.3| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X8, mRNA
Length=2722
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|1034634075|ref|XM_017006676.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X9, mRNA
Length=2756
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|1034634072|ref|XM_017006675.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X7, mRNA
Length=2759
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|1034634077|ref|XM_005265256.3| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X10, mRNA
Length=2924
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|1034634062|ref|XM_005265250.4| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X1, mRNA
Length=2896
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|1034634078|ref|XM_017006677.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X11, mRNA
Length=2963
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|574272304|ref|NM_001289101.1| Homo sapiens PX domain containing
serine/threonine kinase like (PXK), transcript variant
7, mRNA
Length=2734
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 672 GGGCATCTTCACGC 685
> gi|574269958|ref|NM_001289096.1| Homo sapiens PX domain containing
serine/threonine kinase like (PXK), transcript variant
3, mRNA
Length=2921
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 859 GGGCATCTTCACGC 872
> gi|574271316|ref|NM_001289100.1| Homo sapiens PX domain containing
serine/threonine kinase like (PXK), transcript variant
6, mRNA
Length=2954
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 859 GGGCATCTTCACGC 872
> gi|574269522|ref|NM_001289095.1| Homo sapiens PX domain containing
serine/threonine kinase like (PXK), transcript variant
2, mRNA
Length=3000
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 907 GGGCATCTTCACGC 920
> gi|574272532|ref|NM_001289099.1| Homo sapiens PX domain containing
serine/threonine kinase like (PXK), transcript variant
5, mRNA
Length=3125
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1063 GGGCATCTTCACGC 1076
> gi|574271714|ref|NM_017771.4| Homo sapiens PX domain containing
serine/threonine kinase like (PXK), transcript variant 1,
mRNA
Length=3020
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|574273241|ref|NM_001289098.1| Homo sapiens PX domain containing
serine/threonine kinase like (PXK), transcript variant
4, mRNA
Length=3053
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 958 GGGCATCTTCACGC 971
> gi|1034634123|ref|XM_017006699.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X34, mRNA
Length=2440
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 676 GGGCATCTTCACGC 689
> gi|1034634125|ref|XM_017006700.1| PREDICTED: Homo sapiens PX
domain containing serine/threonine kinase like (PXK), transcript
variant X35, mRNA
Length=2492
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 694 GGGCATCTTCACGC 707
> gi|111160871|ref|NM_003468.3| Homo sapiens frizzled class receptor
5 (FZD5), mRNA
Length=6584
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 GGCATCTTCACGCT 15
||||||||||||||
Sbjct 1761 GGCATCTTCACGCT 1774
> gi|63477961|ref|NM_000911.3| Homo sapiens opioid receptor delta
1 (OPRD1), mRNA
Length=1774
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GCATCTTCACGCTC 16
||||||||||||||
Sbjct 646 GCATCTTCACGCTC 659
> gi|1034681191|ref|XR_001731687.1| PREDICTED: Homo sapiens uncharacterized
LOC107984315 (LOC107984315), ncRNA
Length=4931
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 4 CATCTTCACGCTCTATTT 21
|||||||| |||||||||
Sbjct 307 CATCTTCAGGCTCTATTT 290
> gi|1034625203|ref|XM_011528856.2| PREDICTED: Homo sapiens CDK5
regulatory subunit associated protein 1 (CDK5RAP1), transcript
variant X1, mRNA
Length=2866
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 TTCACGCTCTATTT 21
||||||||||||||
Sbjct 550 TTCACGCTCTATTT 537
> gi|574288966|ref|NR_110310.1| Homo sapiens family with sequence
similarity 96 member A (FAM96A), transcript variant 4, non-coding
RNA
Length=1232
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCATCTTCACGCTC 16
||||||||||||||
Sbjct 244 GCATCTTCACGCTC 231
> gi|574286783|ref|NM_032231.5| Homo sapiens family with sequence
similarity 96 member A (FAM96A), transcript variant 1, mRNA
Length=1114
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCATCTTCACGCTC 16
||||||||||||||
Sbjct 244 GCATCTTCACGCTC 231
> gi|574286888|ref|NM_001289108.1| Homo sapiens family with sequence
similarity 96 member A (FAM96A), transcript variant 3,
mRNA
Length=3527
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCATCTTCACGCTC 16
||||||||||||||
Sbjct 244 GCATCTTCACGCTC 231
> gi|574286784|ref|NM_001014812.2| Homo sapiens family with sequence
similarity 96 member A (FAM96A), transcript variant 2,
mRNA
Length=1064
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCATCTTCACGCTC 16
||||||||||||||
Sbjct 244 GCATCTTCACGCTC 231
> gi|1034588572|ref|XM_017021779.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X29, mRNA
Length=2181
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1994 GGGCATCTTCACGC 1981
> gi|1034588591|ref|XR_001750597.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X43, misc_RNA
Length=2299
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2112 GGGCATCTTCACGC 2099
> gi|1034588560|ref|XM_017021773.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X21, mRNA
Length=2624
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2437 GGGCATCTTCACGC 2424
> gi|1034588570|ref|XM_017021778.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X28, mRNA
Length=2471
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2284 GGGCATCTTCACGC 2271
> gi|1034588546|ref|XM_017021766.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X7, mRNA
Length=2667
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2480 GGGCATCTTCACGC 2467
> gi|1034588566|ref|XM_017021776.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X26, mRNA
Length=2391
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2204 GGGCATCTTCACGC 2191
> gi|1034588549|ref|XM_017021767.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X9, mRNA
Length=2626
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2439 GGGCATCTTCACGC 2426
> gi|1034588543|ref|XM_011537337.2| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X3, mRNA
Length=2720
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2533 GGGCATCTTCACGC 2520
> gi|1034588541|ref|XM_011537335.2| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X1, mRNA
Length=2822
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2635 GGGCATCTTCACGC 2622
> gi|1034588589|ref|XR_001750596.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X41, misc_RNA
Length=2376
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2189 GGGCATCTTCACGC 2176
> gi|1034588592|ref|XM_006720320.3| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X44, mRNA
Length=1157
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 970 GGGCATCTTCACGC 957
> gi|1034588585|ref|XM_011537356.2| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X38, mRNA
Length=1376
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1189 GGGCATCTTCACGC 1176
> gi|1034588580|ref|XM_011537352.2| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X34, mRNA
Length=1471
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1284 GGGCATCTTCACGC 1271
> gi|334848134|ref|NM_001242416.1| Homo sapiens WD repeat domain
20 (WDR20), transcript variant 6, mRNA
Length=2437
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2238 GGGCATCTTCACGC 2225
> gi|992068357|ref|NM_001320130.1| Homo sapiens WD repeat domain
20 (WDR20), transcript variant 10, mRNA
Length=1348
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1161 GGGCATCTTCACGC 1148
> gi|334848129|ref|NM_181291.2| Homo sapiens WD repeat domain 20
(WDR20), transcript variant 1, mRNA
Length=2620
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2421 GGGCATCTTCACGC 2408
> gi|1034588564|ref|XM_017021775.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X25, mRNA
Length=2477
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2290 GGGCATCTTCACGC 2277
> gi|1034588556|ref|XM_017021771.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X14, mRNA
Length=2676
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2489 GGGCATCTTCACGC 2476
> gi|1034588586|ref|XM_017021784.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X39, mRNA
Length=1483
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 1296 GGGCATCTTCACGC 1283
> gi|1034588551|ref|XM_017021768.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X10, mRNA
Length=2743
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2556 GGGCATCTTCACGC 2543
> gi|1034588568|ref|XM_017021777.1| PREDICTED: Homo sapiens WD
repeat domain 20 (WDR20), transcript variant X27, mRNA
Length=2359
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGCATCTTCACGC 14
||||||||||||||
Sbjct 2172 GGGCATCTTCACGC 2159
> gi|1034576688|ref|XR_001748138.1| PREDICTED: Homo sapiens uncharacterized
LOC107984315 (LOC107984315), ncRNA
Length=4931
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 4 CATCTTCACGCTCTATTT 21
|||||||| |||||||||
Sbjct 307 CATCTTCAGGCTCTATTT 290
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2921475425
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2