BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= GGGACAGCAGAGGAAGACC (evalue = 10)
Length=19
Score E
Sequences producing significant alignments: (Bits) Value
gi|334085241|ref|NM_001220778.1| Homo sapiens cyclin-dependent ... 38.2 0.006
gi|310832422|ref|NM_000389.4| Homo sapiens cyclin-dependent kin... 38.2 0.006
gi|614458210|ref|NM_001291549.1| Homo sapiens cyclin-dependent ... 38.2 0.006
gi|310832423|ref|NM_078467.2| Homo sapiens cyclin-dependent kin... 38.2 0.006
gi|334085239|ref|NM_001220777.1| Homo sapiens cyclin-dependent ... 38.2 0.006
gi|1034587749|ref|XM_005267921.3| PREDICTED: Homo sapiens brain... 32.2 0.35
gi|1034650706|ref|XM_011514727.2| PREDICTED: Homo sapiens leuci... 32.2 0.35
gi|95113663|ref|NM_018214.4| Homo sapiens leucine rich repeat c... 32.2 0.35
gi|1034650707|ref|XR_001743504.1| PREDICTED: Homo sapiens leuci... 32.2 0.35
gi|1034650705|ref|XM_011514726.2| PREDICTED: Homo sapiens leuci... 32.2 0.35
gi|1034683283|ref|XR_915108.2| PREDICTED: Homo sapiens uncharac... 30.2 1.4
gi|1034698761|ref|XR_958632.2| PREDICTED: Homo sapiens uncharac... 30.2 1.4
gi|1034692576|ref|XM_017027781.1| PREDICTED: Homo sapiens trans... 30.2 1.4
gi|1034585633|ref|XR_942092.2| PREDICTED: Homo sapiens uncharac... 30.2 1.4
gi|1034672911|ref|XR_930145.2| PREDICTED: Homo sapiens uncharac... 30.2 1.4
gi|1034661404|ref|XM_017013801.1| PREDICTED: Homo sapiens trans... 30.2 1.4
gi|1034642176|ref|XM_017008883.1| PREDICTED: Homo sapiens trans... 30.2 1.4
gi|507588246|ref|NM_001103.3| Homo sapiens actinin alpha 2 (ACT... 30.2 1.4
gi|507588247|ref|NM_001278343.1| Homo sapiens actinin alpha 2 (... 30.2 1.4
gi|507588249|ref|NM_001278344.1| Homo sapiens actinin alpha 2 (... 30.2 1.4
gi|1034578670|ref|XM_011520934.2| PREDICTED: Homo sapiens forkh... 30.2 1.4
gi|1034578667|ref|XM_005253676.3| PREDICTED: Homo sapiens forkh... 30.2 1.4
gi|1034578669|ref|XM_011520931.2| PREDICTED: Homo sapiens forkh... 30.2 1.4
gi|1034578668|ref|XM_011520930.2| PREDICTED: Homo sapiens forkh... 30.2 1.4
gi|340545539|ref|NM_202002.2| Homo sapiens forkhead box M1 (FOX... 30.2 1.4
gi|340545540|ref|NM_021953.3| Homo sapiens forkhead box M1 (FOX... 30.2 1.4
gi|340545541|ref|NM_202003.2| Homo sapiens forkhead box M1 (FOX... 30.2 1.4
gi|340545542|ref|NM_001243088.1| Homo sapiens forkhead box M1 (... 30.2 1.4
gi|340545544|ref|NM_001243089.1| Homo sapiens forkhead box M1 (... 30.2 1.4
gi|1034682964|ref|XR_001732598.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034691694|ref|XR_431632.3| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034689078|ref|XR_933169.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034629724|ref|XM_011530476.2| PREDICTED: Homo sapiens MICAL... 28.2 5.5
gi|211971077|ref|NR_024389.1| Homo sapiens uncharacterized LOC1... 28.2 5.5
gi|120431742|ref|NM_001079870.1| Homo sapiens huntingtin-associ... 28.2 5.5
gi|120431737|ref|NM_177977.2| Homo sapiens huntingtin-associate... 28.2 5.5
gi|120431744|ref|NM_001079871.1| Homo sapiens huntingtin-associ... 28.2 5.5
gi|1034600333|ref|XM_017024810.1| PREDICTED: Homo sapiens schla... 28.2 5.5
gi|1034600330|ref|XM_011524967.2| PREDICTED: Homo sapiens schla... 28.2 5.5
gi|1034600329|ref|XM_005257995.4| PREDICTED: Homo sapiens schla... 28.2 5.5
gi|1034600331|ref|XM_017024809.1| PREDICTED: Homo sapiens schla... 28.2 5.5
gi|1034583158|ref|XR_001749246.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|195947392|ref|NM_006479.4| Homo sapiens RAD51 associated pro... 28.2 5.5
gi|195947390|ref|NM_001130862.1| Homo sapiens RAD51 associated ... 28.2 5.5
gi|1034664132|ref|XM_017014377.1| PREDICTED: Homo sapiens extra... 28.2 5.5
gi|1034664130|ref|XM_017014376.1| PREDICTED: Homo sapiens extra... 28.2 5.5
gi|308818202|ref|NM_001393.3| Homo sapiens extracellular matrix... 28.2 5.5
gi|308818203|ref|NM_001197295.1| Homo sapiens extracellular mat... 28.2 5.5
gi|308818205|ref|NM_001197296.1| Homo sapiens extracellular mat... 28.2 5.5
gi|316983120|ref|NM_024594.3| Homo sapiens pantothenate kinase ... 28.2 5.5
gi|377823730|ref|NM_001256794.1| Homo sapiens bone morphogeneti... 28.2 5.5
gi|377823724|ref|NM_001256793.1| Homo sapiens bone morphogeneti... 28.2 5.5
gi|377823722|ref|NM_001256792.1| Homo sapiens bone morphogeneti... 28.2 5.5
gi|1034640984|ref|XM_017008560.1| PREDICTED: Homo sapiens bone ... 28.2 5.5
gi|1034640986|ref|XM_017008561.1| PREDICTED: Homo sapiens bone ... 28.2 5.5
gi|1034640980|ref|XM_017008558.1| PREDICTED: Homo sapiens bone ... 28.2 5.5
gi|1034640988|ref|XM_011532201.2| PREDICTED: Homo sapiens bone ... 28.2 5.5
gi|1034640982|ref|XM_017008559.1| PREDICTED: Homo sapiens bone ... 28.2 5.5
gi|169790809|ref|NM_001203.2| Homo sapiens bone morphogenetic p... 28.2 5.5
gi|1034637757|ref|XR_427412.3| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|285026440|ref|NM_001171906.1| Homo sapiens nudix hydrolase 1... 28.2 5.5
gi|285026433|ref|NM_152395.2| Homo sapiens nudix hydrolase 16 (... 28.2 5.5
gi|1034619688|ref|XR_923723.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|224586797|ref|NR_027258.1| Homo sapiens prolyl-tRNA syntheta... 28.2 5.5
gi|1034693106|ref|XR_001754989.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034693108|ref|XR_001754997.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034693109|ref|XR_001755002.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034693110|ref|XR_001755004.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034693111|ref|XR_001755008.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034693107|ref|XR_951241.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034693083|ref|XR_951071.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034693080|ref|XR_951068.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034693084|ref|XR_001754914.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034693081|ref|XR_001754913.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034688385|ref|XR_926057.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034688386|ref|XR_001743072.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034688384|ref|XR_001743071.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034688383|ref|XR_001743070.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034688382|ref|XR_001743069.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|31791003|ref|NM_181600.1| Homo sapiens keratin associated pr... 28.2 5.5
gi|768016671|ref|XM_011528720.1| PREDICTED: Homo sapiens zinc f... 28.2 5.5
gi|768016670|ref|XM_005260341.3| PREDICTED: Homo sapiens zinc f... 28.2 5.5
gi|1034624585|ref|XM_017027737.1| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|1034624589|ref|XM_017027738.1| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|76563911|ref|NM_015035.3| Homo sapiens zinc fingers and home... 28.2 5.5
gi|21327679|ref|NM_001672.2| Homo sapiens agouti signaling prot... 28.2 5.5
gi|1034625133|ref|XM_005260412.3| PREDICTED: Homo sapiens agout... 28.2 5.5
gi|1034625134|ref|XM_011528820.2| PREDICTED: Homo sapiens agout... 28.2 5.5
gi|768017183|ref|XM_011528821.1| PREDICTED: Homo sapiens agouti... 28.2 5.5
gi|1034584274|ref|XM_005254039.2| PREDICTED: Homo sapiens SLIT ... 28.2 5.5
gi|40217822|ref|NM_015567.1| Homo sapiens SLIT and NTRK like fa... 28.2 5.5
gi|1034584273|ref|XM_005254038.4| PREDICTED: Homo sapiens SLIT ... 28.2 5.5
gi|214010225|ref|NM_001142285.1| Homo sapiens ribosomal protein... 28.2 5.5
gi|257196278|ref|NM_003012.4| Homo sapiens secreted frizzled-re... 28.2 5.5
gi|168480138|ref|NM_021116.2| Homo sapiens adenylate cyclase 1 ... 28.2 5.5
gi|1034643090|ref|XR_001741930.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034643092|ref|XR_001741931.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034643093|ref|XR_001741932.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034643094|ref|XR_001741933.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034643095|ref|XR_001741934.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034643091|ref|XR_939534.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034643067|ref|XR_939490.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034643064|ref|XR_001741921.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034643068|ref|XR_001741923.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034643066|ref|XR_001741922.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034643065|ref|XR_939491.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|112734858|ref|NM_018293.2| Homo sapiens zinc finger protein ... 28.2 5.5
gi|1034634361|ref|XM_017006794.1| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|1034634353|ref|XM_017006791.1| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|1034634355|ref|XM_017006792.1| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|1034634349|ref|XM_017006789.1| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|1034634357|ref|XM_011534340.2| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|1034634359|ref|XM_017006793.1| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|1034634363|ref|XM_017006795.1| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|1034634351|ref|XM_017006790.1| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|157266295|ref|NM_031313.2| Homo sapiens alkaline phosphatase... 28.2 5.5
gi|1034619034|ref|XR_001739508.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034563769|ref|XM_005245653.4| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563773|ref|XM_017002966.1| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563775|ref|XM_006711678.3| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563767|ref|XM_005245652.3| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563779|ref|XM_011510210.2| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563777|ref|XM_017002967.1| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563780|ref|XM_017002968.1| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563784|ref|XM_017002970.1| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563786|ref|XM_017002971.1| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563782|ref|XM_017002969.1| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|291327484|ref|NM_001174061.1| Homo sapiens SMG7 nonsense med... 28.2 5.5
gi|291327483|ref|NM_201568.2| Homo sapiens SMG7 nonsense mediat... 28.2 5.5
gi|291327486|ref|NM_201569.2| Homo sapiens SMG7 nonsense mediat... 28.2 5.5
gi|291327482|ref|NM_173156.2| Homo sapiens SMG7 nonsense mediat... 28.2 5.5
gi|1034563771|ref|XM_011510208.2| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563772|ref|XM_006711676.3| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563766|ref|XM_005245649.3| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563765|ref|XM_005245648.3| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563770|ref|XM_011510207.2| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563768|ref|XM_011510206.2| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563776|ref|XM_011510209.2| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563764|ref|XM_011510205.2| PREDICTED: Homo sapiens SMG7,... 28.2 5.5
gi|1034563206|ref|XM_005271315.3| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|1034563207|ref|XM_011542416.2| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|1034563204|ref|XM_017002783.1| PREDICTED: Homo sapiens zinc ... 28.2 5.5
gi|122937332|ref|NM_001080470.1| Homo sapiens zinc finger prote... 28.2 5.5
> gi|334085241|ref|NM_001220778.1| Homo sapiens cyclin-dependent
kinase inhibitor 1A (CDKN1A), transcript variant 4, mRNA
Length=2284
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGAAGACC 19
|||||||||||||||||||
Sbjct 545 GGGACAGCAGAGGAAGACC 563
> gi|310832422|ref|NM_000389.4| Homo sapiens cyclin-dependent kinase
inhibitor 1A (CDKN1A), transcript variant 1, mRNA
Length=2175
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGAAGACC 19
|||||||||||||||||||
Sbjct 435 GGGACAGCAGAGGAAGACC 453
> gi|614458210|ref|NM_001291549.1| Homo sapiens cyclin-dependent
kinase inhibitor 1A (CDKN1A), transcript variant 3, mRNA
Length=2325
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGAAGACC 19
|||||||||||||||||||
Sbjct 587 GGGACAGCAGAGGAAGACC 605
> gi|310832423|ref|NM_078467.2| Homo sapiens cyclin-dependent kinase
inhibitor 1A (CDKN1A), transcript variant 2, mRNA
Length=2122
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGAAGACC 19
|||||||||||||||||||
Sbjct 382 GGGACAGCAGAGGAAGACC 400
> gi|334085239|ref|NM_001220777.1| Homo sapiens cyclin-dependent
kinase inhibitor 1A (CDKN1A), transcript variant 5, mRNA
Length=2119
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGAAGACC 19
|||||||||||||||||||
Sbjct 380 GGGACAGCAGAGGAAGACC 398
> gi|1034587749|ref|XM_005267921.3| PREDICTED: Homo sapiens brain
enriched guanylate kinase associated (BEGAIN), transcript
variant X4, mRNA
Length=6384
Score = 32.2 bits (16), Expect = 0.35
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGAAG 16
||||||||||||||||
Sbjct 3393 GGGACAGCAGAGGAAG 3378
> gi|1034650706|ref|XM_011514727.2| PREDICTED: Homo sapiens leucine
rich repeat containing 1 (LRRC1), transcript variant X2,
mRNA
Length=2974
Score = 32.2 bits (16), Expect = 0.35
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 3 GACAGCAGAGGAAGAC 18
||||||||||||||||
Sbjct 1686 GACAGCAGAGGAAGAC 1671
> gi|95113663|ref|NM_018214.4| Homo sapiens leucine rich repeat
containing 1 (LRRC1), mRNA
Length=3180
Score = 32.2 bits (16), Expect = 0.35
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 3 GACAGCAGAGGAAGAC 18
||||||||||||||||
Sbjct 1896 GACAGCAGAGGAAGAC 1881
> gi|1034650707|ref|XR_001743504.1| PREDICTED: Homo sapiens leucine
rich repeat containing 1 (LRRC1), transcript variant X3,
misc_RNA
Length=3541
Score = 32.2 bits (16), Expect = 0.35
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 3 GACAGCAGAGGAAGAC 18
||||||||||||||||
Sbjct 2257 GACAGCAGAGGAAGAC 2242
> gi|1034650705|ref|XM_011514726.2| PREDICTED: Homo sapiens leucine
rich repeat containing 1 (LRRC1), transcript variant X1,
mRNA
Length=3548
Score = 32.2 bits (16), Expect = 0.35
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 3 GACAGCAGAGGAAGAC 18
||||||||||||||||
Sbjct 2260 GACAGCAGAGGAAGAC 2245
> gi|1034683283|ref|XR_915108.2| PREDICTED: Homo sapiens uncharacterized
LOC105370261 (LOC105370261), ncRNA
Length=688
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 177 GGGACAGCAGAGGAA 191
> gi|1034698761|ref|XR_958632.2| PREDICTED: Homo sapiens uncharacterized
LOC105376161 (LOC105376161), ncRNA
Length=1798
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 4 ACAGCAGAGGAAGAC 18
|||||||||||||||
Sbjct 1065 ACAGCAGAGGAAGAC 1079
> gi|1034692576|ref|XM_017027781.1| PREDICTED: Homo sapiens translation
initiation factor IF-2-like (LOC107986213), mRNA
Length=1301
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 5 CAGCAGAGGAAGACC 19
|||||||||||||||
Sbjct 81 CAGCAGAGGAAGACC 95
> gi|1034585633|ref|XR_942092.2| PREDICTED: Homo sapiens uncharacterized
LOC105370261 (LOC105370261), ncRNA
Length=688
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 177 GGGACAGCAGAGGAA 191
> gi|1034672911|ref|XR_930145.2| PREDICTED: Homo sapiens uncharacterized
LOC105376161 (LOC105376161), ncRNA
Length=1798
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 4 ACAGCAGAGGAAGAC 18
|||||||||||||||
Sbjct 1065 ACAGCAGAGGAAGAC 1079
> gi|1034661404|ref|XM_017013801.1| PREDICTED: Homo sapiens transcriptional
repressor GATA binding 1 (TRPS1), transcript variant
X1, mRNA
Length=13614
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 736 GGGACAGCAGAGGAA 750
> gi|1034642176|ref|XM_017008883.1| PREDICTED: Homo sapiens translation
initiation factor IF-2-like (LOC107986213), mRNA
Length=1284
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 5 CAGCAGAGGAAGACC 19
|||||||||||||||
Sbjct 72 CAGCAGAGGAAGACC 86
> gi|507588246|ref|NM_001103.3| Homo sapiens actinin alpha 2 (ACTN2),
transcript variant 1, mRNA
Length=4926
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 5 CAGCAGAGGAAGACC 19
|||||||||||||||
Sbjct 335 CAGCAGAGGAAGACC 349
> gi|507588247|ref|NM_001278343.1| Homo sapiens actinin alpha 2
(ACTN2), transcript variant 2, mRNA
Length=4926
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 5 CAGCAGAGGAAGACC 19
|||||||||||||||
Sbjct 335 CAGCAGAGGAAGACC 349
> gi|507588249|ref|NM_001278344.1| Homo sapiens actinin alpha 2
(ACTN2), transcript variant 3, mRNA
Length=5123
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 5 CAGCAGAGGAAGACC 19
|||||||||||||||
Sbjct 335 CAGCAGAGGAAGACC 349
> gi|1034578670|ref|XM_011520934.2| PREDICTED: Homo sapiens forkhead
box M1 (FOXM1), transcript variant X6, mRNA
Length=3589
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 2846 GGGACAGCAGAGGAA 2832
> gi|1034578667|ref|XM_005253676.3| PREDICTED: Homo sapiens forkhead
box M1 (FOXM1), transcript variant X1, mRNA
Length=3531
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 2788 GGGACAGCAGAGGAA 2774
> gi|1034578669|ref|XM_011520931.2| PREDICTED: Homo sapiens forkhead
box M1 (FOXM1), transcript variant X3, mRNA
Length=3486
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 2743 GGGACAGCAGAGGAA 2729
> gi|1034578668|ref|XM_011520930.2| PREDICTED: Homo sapiens forkhead
box M1 (FOXM1), transcript variant X2, mRNA
Length=3528
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 2785 GGGACAGCAGAGGAA 2771
> gi|340545539|ref|NM_202002.2| Homo sapiens forkhead box M1 (FOXM1),
transcript variant 1, mRNA
Length=3665
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 2899 GGGACAGCAGAGGAA 2885
> gi|340545540|ref|NM_021953.3| Homo sapiens forkhead box M1 (FOXM1),
transcript variant 2, mRNA
Length=3551
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 2785 GGGACAGCAGAGGAA 2771
> gi|340545541|ref|NM_202003.2| Homo sapiens forkhead box M1 (FOXM1),
transcript variant 3, mRNA
Length=3506
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 2740 GGGACAGCAGAGGAA 2726
> gi|340545542|ref|NM_001243088.1| Homo sapiens forkhead box M1
(FOXM1), transcript variant 4, mRNA
Length=3506
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 2740 GGGACAGCAGAGGAA 2726
> gi|340545544|ref|NM_001243089.1| Homo sapiens forkhead box M1
(FOXM1), transcript variant 5, mRNA
Length=3503
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGAA 15
|||||||||||||||
Sbjct 2737 GGGACAGCAGAGGAA 2723
> gi|1034682964|ref|XR_001732598.1| PREDICTED: Homo sapiens uncharacterized
LOC105369890 (LOC105369890), ncRNA
Length=7083
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 1049 GGGACAGCAGAGGA 1062
> gi|1034691694|ref|XR_431632.3| PREDICTED: Homo sapiens uncharacterized
LOC102724019 (LOC102724019), ncRNA
Length=13845
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 5440 ACAGCAGAGGAAGA 5453
> gi|1034689078|ref|XR_933169.2| PREDICTED: Homo sapiens uncharacterized
LOC105373813 (LOC105373813), transcript variant X4,
ncRNA
Length=7069
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 6393 CAGCAGAGGAAGAC 6406
> gi|1034629724|ref|XM_011530476.2| PREDICTED: Homo sapiens MICAL
like 1 (MICALL1), transcript variant X9, mRNA
Length=2309
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 2215 GGGACAGCAGAGGA 2228
> gi|211971077|ref|NR_024389.1| Homo sapiens uncharacterized LOC100192386
(FLJ16779), long non-coding RNA
Length=7650
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 3251 GGGACAGCAGAGGA 3264
> gi|120431742|ref|NM_001079870.1| Homo sapiens huntingtin-associated
protein 1 (HAP1), transcript variant 3, mRNA
Length=3893
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 885 AGCAGAGGAAGACC 898
> gi|120431737|ref|NM_177977.2| Homo sapiens huntingtin-associated
protein 1 (HAP1), transcript variant 2, mRNA
Length=3944
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 861 AGCAGAGGAAGACC 874
> gi|120431744|ref|NM_001079871.1| Homo sapiens huntingtin-associated
protein 1 (HAP1), transcript variant 4, mRNA
Length=3869
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 861 AGCAGAGGAAGACC 874
> gi|1034600333|ref|XM_017024810.1| PREDICTED: Homo sapiens schlafen
family member 12 (SLFN12), transcript variant X4, mRNA
Length=5376
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4514 CAGCAGAGGAAGAC 4527
> gi|1034600330|ref|XM_011524967.2| PREDICTED: Homo sapiens schlafen
family member 12 (SLFN12), transcript variant X2, mRNA
Length=4908
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4046 CAGCAGAGGAAGAC 4059
> gi|1034600329|ref|XM_005257995.4| PREDICTED: Homo sapiens schlafen
family member 12 (SLFN12), transcript variant X1, mRNA
Length=4786
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 3924 CAGCAGAGGAAGAC 3937
> gi|1034600331|ref|XM_017024809.1| PREDICTED: Homo sapiens schlafen
family member 12 (SLFN12), transcript variant X3, mRNA
Length=4719
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 3857 CAGCAGAGGAAGAC 3870
> gi|1034583158|ref|XR_001749246.1| PREDICTED: Homo sapiens uncharacterized
LOC105369890 (LOC105369890), ncRNA
Length=7088
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 1049 GGGACAGCAGAGGA 1062
> gi|195947392|ref|NM_006479.4| Homo sapiens RAD51 associated protein
1 (RAD51AP1), transcript variant 2, mRNA
Length=2218
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 639 ACAGCAGAGGAAGA 652
> gi|195947390|ref|NM_001130862.1| Homo sapiens RAD51 associated
protein 1 (RAD51AP1), transcript variant 1, mRNA
Length=2269
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 690 ACAGCAGAGGAAGA 703
> gi|1034664132|ref|XM_017014377.1| PREDICTED: Homo sapiens extracellular
matrix protein 2 (ECM2), transcript variant X2, mRNA
Length=1170
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 755 GGGACAGCAGAGGA 768
> gi|1034664130|ref|XM_017014376.1| PREDICTED: Homo sapiens extracellular
matrix protein 2 (ECM2), transcript variant X1, mRNA
Length=2170
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 755 GGGACAGCAGAGGA 768
> gi|308818202|ref|NM_001393.3| Homo sapiens extracellular matrix
protein 2 (ECM2), transcript variant 1, mRNA
Length=3307
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 915 GGGACAGCAGAGGA 928
> gi|308818203|ref|NM_001197295.1| Homo sapiens extracellular matrix
protein 2 (ECM2), transcript variant 2, mRNA
Length=3241
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 849 GGGACAGCAGAGGA 862
> gi|308818205|ref|NM_001197296.1| Homo sapiens extracellular matrix
protein 2 (ECM2), transcript variant 3, mRNA
Length=2656
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 849 GGGACAGCAGAGGA 862
> gi|316983120|ref|NM_024594.3| Homo sapiens pantothenate kinase
3 (PANK3), mRNA
Length=3404
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 426 ACAGCAGAGGAAGA 439
> gi|377823730|ref|NM_001256794.1| Homo sapiens bone morphogenetic
protein receptor type 1B (BMPR1B), transcript variant 4,
mRNA
Length=5440
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 2882 GGGACAGCAGAGGA 2895
> gi|377823724|ref|NM_001256793.1| Homo sapiens bone morphogenetic
protein receptor type 1B (BMPR1B), transcript variant 1,
mRNA
Length=5397
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 2839 GGGACAGCAGAGGA 2852
> gi|377823722|ref|NM_001256792.1| Homo sapiens bone morphogenetic
protein receptor type 1B (BMPR1B), transcript variant 3,
mRNA
Length=5456
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 2898 GGGACAGCAGAGGA 2911
> gi|1034640984|ref|XM_017008560.1| PREDICTED: Homo sapiens bone
morphogenetic protein receptor type 1B (BMPR1B), transcript
variant X3, mRNA
Length=5516
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 2955 GGGACAGCAGAGGA 2968
> gi|1034640986|ref|XM_017008561.1| PREDICTED: Homo sapiens bone
morphogenetic protein receptor type 1B (BMPR1B), transcript
variant X4, mRNA
Length=5473
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 2912 GGGACAGCAGAGGA 2925
> gi|1034640980|ref|XM_017008558.1| PREDICTED: Homo sapiens bone
morphogenetic protein receptor type 1B (BMPR1B), transcript
variant X1, mRNA
Length=5634
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 3073 GGGACAGCAGAGGA 3086
> gi|1034640988|ref|XM_011532201.2| PREDICTED: Homo sapiens bone
morphogenetic protein receptor type 1B (BMPR1B), transcript
variant X5, mRNA
Length=5442
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 2881 GGGACAGCAGAGGA 2894
> gi|1034640982|ref|XM_017008559.1| PREDICTED: Homo sapiens bone
morphogenetic protein receptor type 1B (BMPR1B), transcript
variant X2, mRNA
Length=5624
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 3063 GGGACAGCAGAGGA 3076
> gi|169790809|ref|NM_001203.2| Homo sapiens bone morphogenetic
protein receptor type 1B (BMPR1B), transcript variant 2, mRNA
Length=5560
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 3002 GGGACAGCAGAGGA 3015
> gi|1034637757|ref|XR_427412.3| PREDICTED: Homo sapiens uncharacterized
LOC102724019 (LOC102724019), ncRNA
Length=13845
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 5440 ACAGCAGAGGAAGA 5453
> gi|285026440|ref|NM_001171906.1| Homo sapiens nudix hydrolase
16 (NUDT16), transcript variant 1, mRNA
Length=930
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 14 GGGACAGCAGAGGA 27
> gi|285026433|ref|NM_152395.2| Homo sapiens nudix hydrolase 16
(NUDT16), transcript variant 2, mRNA
Length=6117
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 14 GGGACAGCAGAGGA 27
> gi|1034619688|ref|XR_923723.2| PREDICTED: Homo sapiens uncharacterized
LOC105373813 (LOC105373813), transcript variant X4,
ncRNA
Length=7068
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 6392 CAGCAGAGGAAGAC 6405
> gi|224586797|ref|NR_027258.1| Homo sapiens prolyl-tRNA synthetase
associated domain containing 1, pseudogene (PRORSD1P),
non-coding RNA
Length=2154
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 281 GGGACAGCAGAGGA 294
> gi|1034693106|ref|XR_001754989.1| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant
X1, ncRNA
Length=6326
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 5441 CAGCAGAGGAAGAC 5428
> gi|1034693108|ref|XR_001754997.1| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant
X3, ncRNA
Length=5780
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4895 CAGCAGAGGAAGAC 4882
> gi|1034693109|ref|XR_001755002.1| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant
X4, ncRNA
Length=5777
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4892 CAGCAGAGGAAGAC 4879
> gi|1034693110|ref|XR_001755004.1| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant
X5, ncRNA
Length=5720
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4835 CAGCAGAGGAAGAC 4822
> gi|1034693111|ref|XR_001755008.1| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant
X6, ncRNA
Length=5696
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4811 CAGCAGAGGAAGAC 4798
> gi|1034693107|ref|XR_951241.2| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant X2,
ncRNA
Length=7396
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 6511 CAGCAGAGGAAGAC 6498
> gi|1034693083|ref|XR_951071.2| PREDICTED: Homo sapiens uncharacterized
LOC105377548 (LOC105377548), transcript variant X2,
ncRNA
Length=6333
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 1959 AGCAGAGGAAGACC 1946
> gi|1034693080|ref|XR_951068.2| PREDICTED: Homo sapiens uncharacterized
LOC105377548 (LOC105377548), transcript variant X6,
ncRNA
Length=5561
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 1187 AGCAGAGGAAGACC 1174
> gi|1034693084|ref|XR_001754914.1| PREDICTED: Homo sapiens uncharacterized
LOC105377548 (LOC105377548), transcript variant
X3, ncRNA
Length=5468
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 1094 AGCAGAGGAAGACC 1081
> gi|1034693081|ref|XR_001754913.1| PREDICTED: Homo sapiens uncharacterized
LOC105377548 (LOC105377548), transcript variant
X1, ncRNA
Length=5505
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 1131 AGCAGAGGAAGACC 1118
> gi|1034688385|ref|XR_926057.2| PREDICTED: Homo sapiens uncharacterized
LOC107984063 (LOC107984063), transcript variant X6,
ncRNA
Length=1990
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 451 CAGCAGAGGAAGAC 438
> gi|1034688386|ref|XR_001743072.1| PREDICTED: Homo sapiens uncharacterized
LOC107984063 (LOC107984063), transcript variant
X7, ncRNA
Length=2000
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 710 CAGCAGAGGAAGAC 697
> gi|1034688384|ref|XR_001743071.1| PREDICTED: Homo sapiens uncharacterized
LOC107984063 (LOC107984063), transcript variant
X5, ncRNA
Length=2180
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 641 CAGCAGAGGAAGAC 628
> gi|1034688383|ref|XR_001743070.1| PREDICTED: Homo sapiens uncharacterized
LOC107984063 (LOC107984063), transcript variant
X4, ncRNA
Length=2309
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 770 CAGCAGAGGAAGAC 757
> gi|1034688382|ref|XR_001743069.1| PREDICTED: Homo sapiens uncharacterized
LOC107984063 (LOC107984063), transcript variant
X3, ncRNA
Length=2250
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 711 CAGCAGAGGAAGAC 698
> gi|31791003|ref|NM_181600.1| Homo sapiens keratin associated
protein 13-4 (KRTAP13-4), mRNA
Length=483
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 228 GGGACAGCAGAGGA 215
> gi|768016671|ref|XM_011528720.1| PREDICTED: Homo sapiens zinc
fingers and homeoboxes 3 (ZHX3), transcript variant X21, mRNA
Length=10025
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 5817 ACAGCAGAGGAAGA 5804
> gi|768016670|ref|XM_005260341.3| PREDICTED: Homo sapiens zinc
fingers and homeoboxes 3 (ZHX3), transcript variant X19, mRNA
Length=9791
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 5583 ACAGCAGAGGAAGA 5570
> gi|1034624585|ref|XM_017027737.1| PREDICTED: Homo sapiens zinc
fingers and homeoboxes 3 (ZHX3), transcript variant X20, mRNA
Length=10033
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 5825 ACAGCAGAGGAAGA 5812
> gi|1034624589|ref|XM_017027738.1| PREDICTED: Homo sapiens zinc
fingers and homeoboxes 3 (ZHX3), transcript variant X22, mRNA
Length=10156
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 5948 ACAGCAGAGGAAGA 5935
> gi|76563911|ref|NM_015035.3| Homo sapiens zinc fingers and homeoboxes
3 (ZHX3), mRNA
Length=9991
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 5782 ACAGCAGAGGAAGA 5769
> gi|21327679|ref|NM_001672.2| Homo sapiens agouti signaling protein
(ASIP), mRNA
Length=584
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 59 AGCAGAGGAAGACC 46
> gi|1034625133|ref|XM_005260412.3| PREDICTED: Homo sapiens agouti
signaling protein (ASIP), transcript variant X1, mRNA
Length=2642
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 2115 AGCAGAGGAAGACC 2102
> gi|1034625134|ref|XM_011528820.2| PREDICTED: Homo sapiens agouti
signaling protein (ASIP), transcript variant X2, mRNA
Length=765
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 238 AGCAGAGGAAGACC 225
> gi|768017183|ref|XM_011528821.1| PREDICTED: Homo sapiens agouti
signaling protein (ASIP), transcript variant X3, mRNA
Length=723
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 196 AGCAGAGGAAGACC 183
> gi|1034584274|ref|XM_005254039.2| PREDICTED: Homo sapiens SLIT
and NTRK like family member 5 (SLITRK5), transcript variant
X2, mRNA
Length=4790
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 1527 ACAGCAGAGGAAGA 1514
> gi|40217822|ref|NM_015567.1| Homo sapiens SLIT and NTRK like
family member 5 (SLITRK5), mRNA
Length=4461
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 1187 ACAGCAGAGGAAGA 1174
> gi|1034584273|ref|XM_005254038.4| PREDICTED: Homo sapiens SLIT
and NTRK like family member 5 (SLITRK5), transcript variant
X1, mRNA
Length=5121
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 1858 ACAGCAGAGGAAGA 1845
> gi|214010225|ref|NM_001142285.1| Homo sapiens ribosomal protein
S24 (RPS24), transcript variant d, mRNA
Length=2820
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 1612 ACAGCAGAGGAAGA 1599
> gi|257196278|ref|NM_003012.4| Homo sapiens secreted frizzled-related
protein 1 (SFRP1), mRNA
Length=4482
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 655 AGCAGAGGAAGACC 642
> gi|168480138|ref|NM_021116.2| Homo sapiens adenylate cyclase
1 (brain) (ADCY1), transcript variant 1, mRNA
Length=12499
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 11012 ACAGCAGAGGAAGA 10999
> gi|1034643090|ref|XR_001741930.1| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant
X1, ncRNA
Length=6329
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 5444 CAGCAGAGGAAGAC 5431
> gi|1034643092|ref|XR_001741931.1| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant
X3, ncRNA
Length=5783
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4898 CAGCAGAGGAAGAC 4885
> gi|1034643093|ref|XR_001741932.1| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant
X4, ncRNA
Length=5780
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4895 CAGCAGAGGAAGAC 4882
> gi|1034643094|ref|XR_001741933.1| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant
X5, ncRNA
Length=5723
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4838 CAGCAGAGGAAGAC 4825
> gi|1034643095|ref|XR_001741934.1| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant
X6, ncRNA
Length=5699
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4814 CAGCAGAGGAAGAC 4801
> gi|1034643091|ref|XR_939534.2| PREDICTED: Homo sapiens uncharacterized
LOC105377576 (LOC105377576), transcript variant X2,
ncRNA
Length=7396
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 6511 CAGCAGAGGAAGAC 6498
> gi|1034643067|ref|XR_939490.2| PREDICTED: Homo sapiens uncharacterized
LOC105377548 (LOC105377548), transcript variant X2,
ncRNA
Length=6333
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 1959 AGCAGAGGAAGACC 1946
> gi|1034643064|ref|XR_001741921.1| PREDICTED: Homo sapiens uncharacterized
LOC105377548 (LOC105377548), transcript variant
X4, ncRNA
Length=5411
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 1037 AGCAGAGGAAGACC 1024
> gi|1034643068|ref|XR_001741923.1| PREDICTED: Homo sapiens uncharacterized
LOC105377548 (LOC105377548), transcript variant
X3, ncRNA
Length=5468
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 1094 AGCAGAGGAAGACC 1081
> gi|1034643066|ref|XR_001741922.1| PREDICTED: Homo sapiens uncharacterized
LOC105377548 (LOC105377548), transcript variant
X1, ncRNA
Length=5505
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 1131 AGCAGAGGAAGACC 1118
> gi|1034643065|ref|XR_939491.2| PREDICTED: Homo sapiens uncharacterized
LOC105377548 (LOC105377548), transcript variant X5,
ncRNA
Length=5628
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 AGCAGAGGAAGACC 19
||||||||||||||
Sbjct 1254 AGCAGAGGAAGACC 1241
> gi|112734858|ref|NM_018293.2| Homo sapiens zinc finger protein
654 (ZNF654), mRNA
Length=4957
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 1142 ACAGCAGAGGAAGA 1129
> gi|1034634361|ref|XM_017006794.1| PREDICTED: Homo sapiens zinc
finger protein 654 (ZNF654), transcript variant X7, mRNA
Length=5302
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 2286 ACAGCAGAGGAAGA 2273
> gi|1034634353|ref|XM_017006791.1| PREDICTED: Homo sapiens zinc
finger protein 654 (ZNF654), transcript variant X3, mRNA
Length=3707
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 2326 ACAGCAGAGGAAGA 2313
> gi|1034634355|ref|XM_017006792.1| PREDICTED: Homo sapiens zinc
finger protein 654 (ZNF654), transcript variant X4, mRNA
Length=5343
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 2327 ACAGCAGAGGAAGA 2314
> gi|1034634349|ref|XM_017006789.1| PREDICTED: Homo sapiens zinc
finger protein 654 (ZNF654), transcript variant X1, mRNA
Length=7082
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 2675 ACAGCAGAGGAAGA 2662
> gi|1034634357|ref|XM_011534340.2| PREDICTED: Homo sapiens zinc
finger protein 654 (ZNF654), transcript variant X5, mRNA
Length=3927
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 2546 ACAGCAGAGGAAGA 2533
> gi|1034634359|ref|XM_017006793.1| PREDICTED: Homo sapiens zinc
finger protein 654 (ZNF654), transcript variant X6, mRNA
Length=5562
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 2546 ACAGCAGAGGAAGA 2533
> gi|1034634363|ref|XM_017006795.1| PREDICTED: Homo sapiens zinc
finger protein 654 (ZNF654), transcript variant X8, mRNA
Length=5496
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 2480 ACAGCAGAGGAAGA 2467
> gi|1034634351|ref|XM_017006790.1| PREDICTED: Homo sapiens zinc
finger protein 654 (ZNF654), transcript variant X2, mRNA
Length=5703
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 ACAGCAGAGGAAGA 17
||||||||||||||
Sbjct 2687 ACAGCAGAGGAAGA 2674
> gi|157266295|ref|NM_031313.2| Homo sapiens alkaline phosphatase,
placental like 2 (ALPPL2), mRNA
Length=2499
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 GGGACAGCAGAGGA 14
||||||||||||||
Sbjct 2185 GGGACAGCAGAGGA 2172
> gi|1034619034|ref|XR_001739508.1| PREDICTED: Homo sapiens uncharacterized
LOC107984063 (LOC107984063), transcript variant
X1, ncRNA
Length=1789
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 250 CAGCAGAGGAAGAC 237
> gi|1034563769|ref|XM_005245653.4| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X6, mRNA
Length=6039
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3654 GGACAGCAGAGGAA 3641
> gi|1034563773|ref|XM_017002966.1| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X10, mRNA
Length=6070
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3685 GGACAGCAGAGGAA 3672
> gi|1034563775|ref|XM_006711678.3| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X11, mRNA
Length=5799
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3414 GGACAGCAGAGGAA 3401
> gi|1034563767|ref|XM_005245652.3| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X4, mRNA
Length=5937
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3552 GGACAGCAGAGGAA 3539
> gi|1034563779|ref|XM_011510210.2| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X14, mRNA
Length=5769
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3384 GGACAGCAGAGGAA 3371
> gi|1034563777|ref|XM_017002967.1| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X13, mRNA
Length=5934
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3543 GGACAGCAGAGGAA 3530
> gi|1034563780|ref|XM_017002968.1| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X15, mRNA
Length=5629
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3238 GGACAGCAGAGGAA 3225
> gi|1034563784|ref|XM_017002970.1| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X17, mRNA
Length=6054
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3669 GGACAGCAGAGGAA 3656
> gi|1034563786|ref|XM_017002971.1| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X18, mRNA
Length=5992
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3607 GGACAGCAGAGGAA 3594
> gi|1034563782|ref|XM_017002969.1| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X16, mRNA
Length=6130
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3745 GGACAGCAGAGGAA 3732
> gi|291327484|ref|NM_001174061.1| Homo sapiens SMG7 nonsense mediated
mRNA decay factor (SMG7), transcript variant 5, mRNA
Length=6054
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3651 GGACAGCAGAGGAA 3638
> gi|291327483|ref|NM_201568.2| Homo sapiens SMG7 nonsense mediated
mRNA decay factor (SMG7), transcript variant 2, mRNA
Length=5798
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3395 GGACAGCAGAGGAA 3382
> gi|291327486|ref|NM_201569.2| Homo sapiens SMG7 nonsense mediated
mRNA decay factor (SMG7), transcript variant 4, mRNA
Length=4789
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3545 GGACAGCAGAGGAA 3532
> gi|291327482|ref|NM_173156.2| Homo sapiens SMG7 nonsense mediated
mRNA decay factor (SMG7), transcript variant 1, mRNA
Length=5936
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 3533 GGACAGCAGAGGAA 3520
> gi|1034563771|ref|XM_011510208.2| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X8, mRNA
Length=5784
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 4396 GGACAGCAGAGGAA 4383
> gi|1034563772|ref|XM_006711676.3| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X9, mRNA
Length=6478
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 4093 GGACAGCAGAGGAA 4080
> gi|1034563766|ref|XM_005245649.3| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X3, mRNA
Length=6616
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 4231 GGACAGCAGAGGAA 4218
> gi|1034563765|ref|XM_005245648.3| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X2, mRNA
Length=6753
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 4368 GGACAGCAGAGGAA 4355
> gi|1034563770|ref|XM_011510207.2| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X7, mRNA
Length=6655
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 4270 GGACAGCAGAGGAA 4257
> gi|1034563768|ref|XM_011510206.2| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X5, mRNA
Length=6793
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 4408 GGACAGCAGAGGAA 4395
> gi|1034563776|ref|XM_011510209.2| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X12, mRNA
Length=6649
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 4258 GGACAGCAGAGGAA 4245
> gi|1034563764|ref|XM_011510205.2| PREDICTED: Homo sapiens SMG7,
nonsense mediated mRNA decay factor (SMG7), transcript variant
X1, mRNA
Length=6939
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GGACAGCAGAGGAA 15
||||||||||||||
Sbjct 4546 GGACAGCAGAGGAA 4533
> gi|1034563206|ref|XM_005271315.3| PREDICTED: Homo sapiens zinc
finger protein 697 (ZNF697), transcript variant X2, mRNA
Length=5061
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4637 CAGCAGAGGAAGAC 4624
> gi|1034563207|ref|XM_011542416.2| PREDICTED: Homo sapiens zinc
finger protein 697 (ZNF697), transcript variant X3, mRNA
Length=8045
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 7616 CAGCAGAGGAAGAC 7603
> gi|1034563204|ref|XM_017002783.1| PREDICTED: Homo sapiens zinc
finger protein 697 (ZNF697), transcript variant X1, mRNA
Length=5301
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4872 CAGCAGAGGAAGAC 4859
> gi|122937332|ref|NM_001080470.1| Homo sapiens zinc finger protein
697 (ZNF697), mRNA
Length=5080
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CAGCAGAGGAAGAC 18
||||||||||||||
Sbjct 4611 CAGCAGAGGAAGAC 4598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 1752885255
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2