BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= GGCAGTCCACAGCAAGAAC (evalue = 10)
Length=19
Score E
Sequences producing significant alignments: (Bits) Value
gi|223717964|ref|NM_001145275.1| Homo sapiens zinc finger prote... 38.2 0.006
gi|223890138|ref|NM_003411.3| Homo sapiens zinc finger protein,... 38.2 0.006
gi|1034676396|ref|XM_017030075.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|223717972|ref|NM_001145276.1| Homo sapiens zinc finger prote... 38.2 0.006
gi|1034676401|ref|XM_017030076.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|768040675|ref|XM_005262570.2| PREDICTED: Homo sapiens zinc f... 38.2 0.006
gi|1034676399|ref|XM_011531474.2| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034676398|ref|XM_011531473.2| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034676400|ref|XM_011531475.2| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034676403|ref|XM_017030077.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675171|ref|XM_017029801.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675164|ref|XM_011545583.2| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675163|ref|XM_005274594.4| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675159|ref|XM_017029796.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675156|ref|XM_017029795.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675149|ref|XM_017029793.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675139|ref|XM_017029788.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|768032743|ref|XM_011545579.1| PREDICTED: Homo sapiens zinc f... 38.2 0.006
gi|1034675141|ref|XM_017029789.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675151|ref|XM_017029794.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|296010876|ref|NM_003410.3| Homo sapiens zinc finger protein,... 38.2 0.006
gi|296010879|ref|NM_001178085.1| Homo sapiens zinc finger prote... 38.2 0.006
gi|296010877|ref|NM_001178084.1| Homo sapiens zinc finger prote... 38.2 0.006
gi|296010881|ref|NM_001178086.1| Homo sapiens zinc finger prote... 38.2 0.006
gi|296010907|ref|NM_001178095.1| Homo sapiens zinc finger prote... 38.2 0.006
gi|1034675165|ref|XM_017029798.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675161|ref|XM_017029797.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675169|ref|XM_017029800.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675153|ref|XM_005274591.4| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675143|ref|XM_017029790.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675138|ref|XM_006724513.3| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675145|ref|XM_017029791.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675158|ref|XM_006724515.3| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675154|ref|XM_011545581.2| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675147|ref|XM_017029792.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|768032740|ref|XM_011545578.1| PREDICTED: Homo sapiens zinc f... 38.2 0.006
gi|1034675167|ref|XM_017029799.1| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|1034675155|ref|XM_005274592.3| PREDICTED: Homo sapiens zinc ... 38.2 0.006
gi|767931305|ref|XM_011531707.1| PREDICTED: Homo sapiens epider... 30.2 1.4
gi|972776363|ref|NM_001178131.2| Homo sapiens epidermal growth ... 30.2 1.4
gi|972776329|ref|NM_001178130.2| Homo sapiens epidermal growth ... 30.2 1.4
gi|972776326|ref|NM_001963.5| Homo sapiens epidermal growth fac... 30.2 1.4
gi|1034638782|ref|XM_017007854.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034638784|ref|XM_017007855.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034638780|ref|XM_017007853.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034638778|ref|XR_001741156.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034638779|ref|XR_001741157.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034638776|ref|XM_017007852.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|767931304|ref|XM_005262796.2| PREDICTED: Homo sapiens epider... 30.2 1.4
gi|1034638768|ref|XM_017007848.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034638774|ref|XM_017007851.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034638770|ref|XM_017007849.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034638766|ref|XM_017007847.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034638772|ref|XM_017007850.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034638764|ref|XM_017007846.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034638762|ref|XM_017007845.1| PREDICTED: Homo sapiens epide... 30.2 1.4
gi|1034682305|ref|XR_001732264.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034682303|ref|XR_914746.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034682302|ref|XR_001732262.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034583504|ref|XR_001749427.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034583502|ref|XR_941401.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034583501|ref|XR_001749425.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|222144248|ref|NM_144666.2| Homo sapiens dynein heavy chain d... 28.2 5.5
gi|1034684638|ref|XR_001733437.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034684641|ref|XR_001733440.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034684643|ref|XR_916373.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034684635|ref|XR_001733435.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034684632|ref|XM_011508499.2| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034692826|ref|XR_001754449.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034692823|ref|XR_001754446.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034692824|ref|XR_001754447.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034692825|ref|XR_001754448.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034692827|ref|XR_001754450.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|55953071|ref|NM_001007269.1| Homo sapiens gem nuclear organe... 28.2 5.5
gi|55953070|ref|NM_024707.2| Homo sapiens gem nuclear organelle... 28.2 5.5
gi|55953073|ref|NM_001007270.1| Homo sapiens gem nuclear organe... 28.2 5.5
gi|1034592743|ref|XR_001751562.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034592745|ref|XR_001751564.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034592746|ref|XR_932292.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034592748|ref|XR_932293.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034592750|ref|XR_932294.2| PREDICTED: Homo sapiens uncharac... 28.2 5.5
gi|1034592741|ref|XR_001751561.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034592735|ref|XM_011522293.2| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034642849|ref|XR_001741799.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034642846|ref|XR_001741796.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034642847|ref|XR_001741797.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034642848|ref|XR_001741798.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|1034642850|ref|XR_001741800.1| PREDICTED: Homo sapiens uncha... 28.2 5.5
gi|961658112|ref|NR_134243.1| Homo sapiens protein phosphatase,... 28.2 5.5
gi|961658083|ref|NM_001317911.1| Homo sapiens protein phosphata... 28.2 5.5
gi|961658085|ref|NM_001317912.1| Homo sapiens protein phosphata... 28.2 5.5
gi|961658082|ref|NM_139245.3| Homo sapiens protein phosphatase,... 28.2 5.5
> gi|223717964|ref|NM_001145275.1| Homo sapiens zinc finger protein,
Y-linked (ZFY), transcript variant 2, mRNA
Length=5017
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1684 GGCAGTCCACAGCAAGAAC 1702
> gi|223890138|ref|NM_003411.3| Homo sapiens zinc finger protein,
Y-linked (ZFY), transcript variant 1, mRNA
Length=5259
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1926 GGCAGTCCACAGCAAGAAC 1944
> gi|1034676396|ref|XM_017030075.1| PREDICTED: Homo sapiens zinc
finger protein, Y-linked (ZFY), transcript variant X2, mRNA
Length=5121
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1805 GGCAGTCCACAGCAAGAAC 1823
> gi|223717972|ref|NM_001145276.1| Homo sapiens zinc finger protein,
Y-linked (ZFY), transcript variant 3, mRNA
Length=4769
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1436 GGCAGTCCACAGCAAGAAC 1454
> gi|1034676401|ref|XM_017030076.1| PREDICTED: Homo sapiens zinc
finger protein, Y-linked (ZFY), transcript variant X6, mRNA
Length=5172
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1856 GGCAGTCCACAGCAAGAAC 1874
> gi|768040675|ref|XM_005262570.2| PREDICTED: Homo sapiens zinc
finger protein, Y-linked (ZFY), transcript variant X1, mRNA
Length=5325
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2009 GGCAGTCCACAGCAAGAAC 2027
> gi|1034676399|ref|XM_011531474.2| PREDICTED: Homo sapiens zinc
finger protein, Y-linked (ZFY), transcript variant X4, mRNA
Length=5901
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2585 GGCAGTCCACAGCAAGAAC 2603
> gi|1034676398|ref|XM_011531473.2| PREDICTED: Homo sapiens zinc
finger protein, Y-linked (ZFY), transcript variant X3, mRNA
Length=6224
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2908 GGCAGTCCACAGCAAGAAC 2926
> gi|1034676400|ref|XM_011531475.2| PREDICTED: Homo sapiens zinc
finger protein, Y-linked (ZFY), transcript variant X5, mRNA
Length=6162
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2846 GGCAGTCCACAGCAAGAAC 2864
> gi|1034676403|ref|XM_017030077.1| PREDICTED: Homo sapiens zinc
finger protein, Y-linked (ZFY), transcript variant X7, mRNA
Length=5752
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2436 GGCAGTCCACAGCAAGAAC 2454
> gi|1034675171|ref|XM_017029801.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X23, mRNA
Length=7022
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1508 GGCAGTCCACAGCAAGAAC 1526
> gi|1034675164|ref|XM_011545583.2| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X19, mRNA
Length=7159
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1645 GGCAGTCCACAGCAAGAAC 1663
> gi|1034675163|ref|XM_005274594.4| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X18, mRNA
Length=8609
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 3095 GGCAGTCCACAGCAAGAAC 3113
> gi|1034675159|ref|XM_017029796.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X16, mRNA
Length=7184
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1670 GGCAGTCCACAGCAAGAAC 1688
> gi|1034675156|ref|XM_017029795.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X14, mRNA
Length=7173
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1659 GGCAGTCCACAGCAAGAAC 1677
> gi|1034675149|ref|XM_017029793.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X8, mRNA
Length=7290
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1776 GGCAGTCCACAGCAAGAAC 1794
> gi|1034675139|ref|XM_017029788.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X3, mRNA
Length=7756
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2242 GGCAGTCCACAGCAAGAAC 2260
> gi|768032743|ref|XM_011545579.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X9, mRNA
Length=7503
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1989 GGCAGTCCACAGCAAGAAC 2007
> gi|1034675141|ref|XM_017029789.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X4, mRNA
Length=8318
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2804 GGCAGTCCACAGCAAGAAC 2822
> gi|1034675151|ref|XM_017029794.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X10, mRNA
Length=7544
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2030 GGCAGTCCACAGCAAGAAC 2048
> gi|296010876|ref|NM_003410.3| Homo sapiens zinc finger protein,
X-linked (ZFX), transcript variant 1, mRNA
Length=7604
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1924 GGCAGTCCACAGCAAGAAC 1942
> gi|296010879|ref|NM_001178085.1| Homo sapiens zinc finger protein,
X-linked (ZFX), transcript variant 3, mRNA
Length=7740
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2060 GGCAGTCCACAGCAAGAAC 2078
> gi|296010877|ref|NM_001178084.1| Homo sapiens zinc finger protein,
X-linked (ZFX), transcript variant 2, mRNA
Length=7396
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1716 GGCAGTCCACAGCAAGAAC 1734
> gi|296010881|ref|NM_001178086.1| Homo sapiens zinc finger protein,
X-linked (ZFX), transcript variant 4, mRNA
Length=6801
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1121 GGCAGTCCACAGCAAGAAC 1139
> gi|296010907|ref|NM_001178095.1| Homo sapiens zinc finger protein,
X-linked (ZFX), transcript variant 5, mRNA
Length=7534
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1854 GGCAGTCCACAGCAAGAAC 1872
> gi|1034675165|ref|XM_017029798.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X20, mRNA
Length=7404
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1890 GGCAGTCCACAGCAAGAAC 1908
> gi|1034675161|ref|XM_017029797.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X17, mRNA
Length=7784
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2270 GGCAGTCCACAGCAAGAAC 2288
> gi|1034675169|ref|XM_017029800.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X22, mRNA
Length=7265
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1751 GGCAGTCCACAGCAAGAAC 1769
> gi|1034675153|ref|XM_005274591.4| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X11, mRNA
Length=7604
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2090 GGCAGTCCACAGCAAGAAC 2108
> gi|1034675143|ref|XM_017029790.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X5, mRNA
Length=7723
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2209 GGCAGTCCACAGCAAGAAC 2227
> gi|1034675138|ref|XM_006724513.3| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X1, mRNA
Length=7833
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2319 GGCAGTCCACAGCAAGAAC 2337
> gi|1034675145|ref|XM_017029791.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X6, mRNA
Length=7613
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2099 GGCAGTCCACAGCAAGAAC 2117
> gi|1034675158|ref|XM_006724515.3| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X15, mRNA
Length=7694
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2180 GGCAGTCCACAGCAAGAAC 2198
> gi|1034675154|ref|XM_011545581.2| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X12, mRNA
Length=7645
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2131 GGCAGTCCACAGCAAGAAC 2149
> gi|1034675147|ref|XM_017029792.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X7, mRNA
Length=7492
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1978 GGCAGTCCACAGCAAGAAC 1996
> gi|768032740|ref|XM_011545578.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X2, mRNA
Length=7715
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 2201 GGCAGTCCACAGCAAGAAC 2219
> gi|1034675167|ref|XM_017029799.1| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X21, mRNA
Length=7278
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1764 GGCAGTCCACAGCAAGAAC 1782
> gi|1034675155|ref|XM_005274592.3| PREDICTED: Homo sapiens zinc
finger protein, X-linked (ZFX), transcript variant X13, mRNA
Length=7419
Score = 38.2 bits (19), Expect = 0.006
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 GGCAGTCCACAGCAAGAAC 19
|||||||||||||||||||
Sbjct 1905 GGCAGTCCACAGCAAGAAC 1923
> gi|767931305|ref|XM_011531707.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X6, mRNA
Length=5257
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 1793 CAGTCCACAGCAAGA 1779
> gi|972776363|ref|NM_001178131.2| Homo sapiens epidermal growth
factor (EGF), transcript variant 3, mRNA
Length=5574
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2017 CAGTCCACAGCAAGA 2003
> gi|972776329|ref|NM_001178130.2| Homo sapiens epidermal growth
factor (EGF), transcript variant 2, mRNA
Length=5577
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2143 CAGTCCACAGCAAGA 2129
> gi|972776326|ref|NM_001963.5| Homo sapiens epidermal growth factor
(EGF), transcript variant 1, mRNA
Length=5700
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2143 CAGTCCACAGCAAGA 2129
> gi|1034638782|ref|XM_017007854.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X14, mRNA
Length=2826
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2168 CAGTCCACAGCAAGA 2154
> gi|1034638784|ref|XM_017007855.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X15, mRNA
Length=2641
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2168 CAGTCCACAGCAAGA 2154
> gi|1034638780|ref|XM_017007853.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X13, mRNA
Length=3361
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2168 CAGTCCACAGCAAGA 2154
> gi|1034638778|ref|XR_001741156.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X11, misc_RNA
Length=3408
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2168 CAGTCCACAGCAAGA 2154
> gi|1034638779|ref|XR_001741157.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X12, misc_RNA
Length=3436
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2168 CAGTCCACAGCAAGA 2154
> gi|1034638776|ref|XM_017007852.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X10, mRNA
Length=5136
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2018 CAGTCCACAGCAAGA 2004
> gi|767931304|ref|XM_005262796.2| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X2, mRNA
Length=5608
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2144 CAGTCCACAGCAAGA 2130
> gi|1034638768|ref|XM_017007848.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X5, mRNA
Length=5506
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2042 CAGTCCACAGCAAGA 2028
> gi|1034638774|ref|XM_017007851.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X9, mRNA
Length=5286
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2168 CAGTCCACAGCAAGA 2154
> gi|1034638770|ref|XM_017007849.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X7, mRNA
Length=5389
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2168 CAGTCCACAGCAAGA 2154
> gi|1034638766|ref|XM_017007847.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X4, mRNA
Length=5509
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2168 CAGTCCACAGCAAGA 2154
> gi|1034638772|ref|XM_017007850.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X8, mRNA
Length=5529
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2168 CAGTCCACAGCAAGA 2154
> gi|1034638764|ref|XM_017007846.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X3, mRNA
Length=5608
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2168 CAGTCCACAGCAAGA 2154
> gi|1034638762|ref|XM_017007845.1| PREDICTED: Homo sapiens epidermal
growth factor (EGF), transcript variant X1, mRNA
Length=5632
Score = 30.2 bits (15), Expect = 1.4
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAGA 17
|||||||||||||||
Sbjct 2168 CAGTCCACAGCAAGA 2154
> gi|1034682305|ref|XR_001732264.1| PREDICTED: Homo sapiens uncharacterized
LOC105370094 (LOC105370094), transcript variant
X4, ncRNA
Length=2355
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 CAGTCCACAGCAAG 16
||||||||||||||
Sbjct 1339 CAGTCCACAGCAAG 1352
> gi|1034682303|ref|XR_914746.2| PREDICTED: Homo sapiens uncharacterized
LOC105370094 (LOC105370094), transcript variant X2,
ncRNA
Length=2245
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 CAGTCCACAGCAAG 16
||||||||||||||
Sbjct 1229 CAGTCCACAGCAAG 1242
> gi|1034682302|ref|XR_001732262.1| PREDICTED: Homo sapiens uncharacterized
LOC105370094 (LOC105370094), transcript variant
X1, ncRNA
Length=2428
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 CAGTCCACAGCAAG 16
||||||||||||||
Sbjct 1412 CAGTCCACAGCAAG 1425
> gi|1034583504|ref|XR_001749427.1| PREDICTED: Homo sapiens uncharacterized
LOC105370094 (LOC105370094), transcript variant
X4, ncRNA
Length=2358
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 CAGTCCACAGCAAG 16
||||||||||||||
Sbjct 1342 CAGTCCACAGCAAG 1355
> gi|1034583502|ref|XR_941401.2| PREDICTED: Homo sapiens uncharacterized
LOC105370094 (LOC105370094), transcript variant X2,
ncRNA
Length=2248
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 CAGTCCACAGCAAG 16
||||||||||||||
Sbjct 1232 CAGTCCACAGCAAG 1245
> gi|1034583501|ref|XR_001749425.1| PREDICTED: Homo sapiens uncharacterized
LOC105370094 (LOC105370094), transcript variant
X1, ncRNA
Length=2431
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 CAGTCCACAGCAAG 16
||||||||||||||
Sbjct 1415 CAGTCCACAGCAAG 1428
> gi|222144248|ref|NM_144666.2| Homo sapiens dynein heavy chain
domain 1 (DNHD1), transcript variant 1, mRNA
Length=14882
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 CAGTCCACAGCAAG 16
||||||||||||||
Sbjct 12464 CAGTCCACAGCAAG 12477
> gi|1034684638|ref|XR_001733437.1| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant
X4, misc_RNA
Length=4983
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034684641|ref|XR_001733440.1| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant
X6, misc_RNA
Length=4980
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034684643|ref|XR_916373.2| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant X8,
misc_RNA
Length=4008
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034684635|ref|XR_001733435.1| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant
X2, misc_RNA
Length=6753
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034684632|ref|XM_011508499.2| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant
X1, mRNA
Length=3318
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034692826|ref|XR_001754449.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X4, ncRNA
Length=3186
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 168 GTCCACAGCAAGAA 155
> gi|1034692823|ref|XR_001754446.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X1, ncRNA
Length=4501
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 1483 GTCCACAGCAAGAA 1470
> gi|1034692824|ref|XR_001754447.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X2, ncRNA
Length=4452
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 1434 GTCCACAGCAAGAA 1421
> gi|1034692825|ref|XR_001754448.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X3, ncRNA
Length=4501
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 1486 GTCCACAGCAAGAA 1473
> gi|1034692827|ref|XR_001754450.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X5, ncRNA
Length=4360
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 1487 GTCCACAGCAAGAA 1474
> gi|55953071|ref|NM_001007269.1| Homo sapiens gem nuclear organelle
associated protein 7 (GEMIN7), transcript variant 2, mRNA
Length=1524
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCAGTCCACAGCAA 15
||||||||||||||
Sbjct 1219 GCAGTCCACAGCAA 1206
> gi|55953070|ref|NM_024707.2| Homo sapiens gem nuclear organelle
associated protein 7 (GEMIN7), transcript variant 1, mRNA
Length=1647
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCAGTCCACAGCAA 15
||||||||||||||
Sbjct 1342 GCAGTCCACAGCAA 1329
> gi|55953073|ref|NM_001007270.1| Homo sapiens gem nuclear organelle
associated protein 7 (GEMIN7), transcript variant 3, mRNA
Length=1561
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCAGTCCACAGCAA 15
||||||||||||||
Sbjct 1256 GCAGTCCACAGCAA 1243
> gi|1034592743|ref|XR_001751562.1| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant
X4, misc_RNA
Length=4983
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034592745|ref|XR_001751564.1| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant
X6, misc_RNA
Length=4980
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034592746|ref|XR_932292.2| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant X8,
misc_RNA
Length=4008
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034592748|ref|XR_932293.2| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant X14,
misc_RNA
Length=4005
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034592750|ref|XR_932294.2| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant X16,
misc_RNA
Length=3507
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034592741|ref|XR_001751561.1| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant
X2, misc_RNA
Length=6749
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034592735|ref|XM_011522293.2| PREDICTED: Homo sapiens uncharacterized
LOC101928635 (LOC101928635), transcript variant
X1, mRNA
Length=3318
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 2252 GTCCACAGCAAGAA 2239
> gi|1034642849|ref|XR_001741799.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X4, ncRNA
Length=3191
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 168 GTCCACAGCAAGAA 155
> gi|1034642846|ref|XR_001741796.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X1, ncRNA
Length=4507
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 1484 GTCCACAGCAAGAA 1471
> gi|1034642847|ref|XR_001741797.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X2, ncRNA
Length=4458
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 1435 GTCCACAGCAAGAA 1422
> gi|1034642848|ref|XR_001741798.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X3, ncRNA
Length=4507
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 1487 GTCCACAGCAAGAA 1474
> gi|1034642850|ref|XR_001741800.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X5, ncRNA
Length=4364
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GTCCACAGCAAGAA 18
||||||||||||||
Sbjct 1487 GTCCACAGCAAGAA 1474
> gi|961658112|ref|NR_134243.1| Homo sapiens protein phosphatase,
Mg2+/Mn2+ dependent 1L (PPM1L), transcript variant 4, non-coding
RNA
Length=10860
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAG 16
||||||||||||||
Sbjct 4307 CAGTCCACAGCAAG 4294
> gi|961658083|ref|NM_001317911.1| Homo sapiens protein phosphatase,
Mg2+/Mn2+ dependent 1L (PPM1L), transcript variant 2,
mRNA
Length=10521
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAG 16
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Sbjct 3968 CAGTCCACAGCAAG 3955
> gi|961658085|ref|NM_001317912.1| Homo sapiens protein phosphatase,
Mg2+/Mn2+ dependent 1L (PPM1L), transcript variant 3,
mRNA
Length=10621
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAG 16
||||||||||||||
Sbjct 4068 CAGTCCACAGCAAG 4055
> gi|961658082|ref|NM_139245.3| Homo sapiens protein phosphatase,
Mg2+/Mn2+ dependent 1L (PPM1L), transcript variant 1, mRNA
Length=10945
Score = 28.2 bits (14), Expect = 5.5
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CAGTCCACAGCAAG 16
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Sbjct 4392 CAGTCCACAGCAAG 4379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 1752885255
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2