BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= GCAGAATGTGAACAAAGTGAACTCGAGTTCACTTTGTTCACATTCTGCTTTTTT (evalue = 10)
Length=54
Score E
Sequences producing significant alignments: (Bits) Value
gi|1034599518|ref|XM_017024574.1| PREDICTED: Homo sapiens immat... 42.1 0.005
gi|737676316|ref|NM_001303265.1| Homo sapiens immature colon ca... 42.1 0.005
gi|737676268|ref|NM_001545.2| Homo sapiens immature colon carci... 42.1 0.005
gi|307344681|ref|NM_014248.3| Homo sapiens ring-box 1 (RBX1), mRNA 34.2 1.1
gi|374858048|ref|NM_018057.6| Homo sapiens solute carrier famil... 34.2 1.1
gi|1034580291|ref|XM_011538525.2| PREDICTED: Homo sapiens solut... 34.2 1.1
gi|374858047|ref|NM_182767.5| Homo sapiens solute carrier famil... 34.2 1.1
gi|374858049|ref|NM_001146335.2| Homo sapiens solute carrier fa... 34.2 1.1
gi|1034638729|ref|XM_017007838.1| PREDICTED: Homo sapiens Ras a... 34.2 1.1
gi|1034569605|ref|XM_011519691.2| PREDICTED: Homo sapiens famil... 32.2 4.3
gi|1034651410|ref|XM_011514825.2| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651390|ref|XM_017011214.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651404|ref|XM_017011218.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651403|ref|XM_005249324.2| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651413|ref|XM_017011222.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651387|ref|XM_005249316.2| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651399|ref|XM_005249322.4| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651398|ref|XM_005249320.4| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651400|ref|XM_017011217.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651402|ref|XM_005249323.3| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651394|ref|XM_005249318.2| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651397|ref|XM_005249319.2| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651406|ref|XM_017011219.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651415|ref|XM_017011223.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651411|ref|XM_017011221.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651388|ref|XM_017011213.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651385|ref|XM_017011212.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651373|ref|XM_017011207.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651379|ref|XM_011514824.2| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651372|ref|XM_005249310.3| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651382|ref|XM_005249315.3| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651408|ref|XM_017011220.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651421|ref|XM_011514826.2| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651417|ref|XM_017011224.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651368|ref|XM_017011205.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651380|ref|XM_017011210.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651375|ref|XM_017011208.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651383|ref|XM_017011211.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651370|ref|XM_017011206.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651377|ref|XM_017011209.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651392|ref|XM_017011215.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|1034651395|ref|XM_017011216.1| PREDICTED: Homo sapiens dysto... 32.2 4.3
gi|291290967|ref|NM_015548.4| Homo sapiens dystonin (DST), tran... 32.2 4.3
gi|469832269|ref|NM_183380.3| Homo sapiens dystonin (DST), tran... 32.2 4.3
gi|221316621|ref|NM_001144770.1| Homo sapiens dystonin (DST), t... 32.2 4.3
gi|469832270|ref|NM_001144769.2| Homo sapiens dystonin (DST), t... 32.2 4.3
> gi|1034599518|ref|XM_017024574.1| PREDICTED: Homo sapiens immature
colon carcinoma transcript 1 (ICT1), transcript variant
X1, mRNA
Length=893
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GCAGAATGTGAACAAAGTGAA 21
|||||||||||||||||||||
Sbjct 283 GCAGAATGTGAACAAAGTGAA 303
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 TTCACTTTGTTCACATTCTGC 48
|||||||||||||||||||||
Sbjct 303 TTCACTTTGTTCACATTCTGC 283
> gi|737676316|ref|NM_001303265.1| Homo sapiens immature colon
carcinoma transcript 1 (ICT1), transcript variant 2, mRNA
Length=909
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GCAGAATGTGAACAAAGTGAA 21
|||||||||||||||||||||
Sbjct 290 GCAGAATGTGAACAAAGTGAA 310
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 TTCACTTTGTTCACATTCTGC 48
|||||||||||||||||||||
Sbjct 310 TTCACTTTGTTCACATTCTGC 290
> gi|737676268|ref|NM_001545.2| Homo sapiens immature colon carcinoma
transcript 1 (ICT1), transcript variant 1, mRNA
Length=914
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GCAGAATGTGAACAAAGTGAA 21
|||||||||||||||||||||
Sbjct 290 GCAGAATGTGAACAAAGTGAA 310
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 TTCACTTTGTTCACATTCTGC 48
|||||||||||||||||||||
Sbjct 310 TTCACTTTGTTCACATTCTGC 290
> gi|307344681|ref|NM_014248.3| Homo sapiens ring-box 1 (RBX1),
mRNA
Length=906
Score = 34.2 bits (17), Expect = 1.1
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Plus
Query 6 ATGTGAACAAAGTGAAC 22
|||||||||||||||||
Sbjct 575 ATGTGAACAAAGTGAAC 591
Score = 34.2 bits (17), Expect = 1.1
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Minus
Query 27 GTTCACTTTGTTCACAT 43
|||||||||||||||||
Sbjct 591 GTTCACTTTGTTCACAT 575
> gi|374858048|ref|NM_018057.6| Homo sapiens solute carrier family
6 member 15 (SLC6A15), transcript variant 2, mRNA
Length=4276
Score = 34.2 bits (17), Expect = 1.1
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Plus
Query 2 CAGAATGTGAACAAAGT 18
|||||||||||||||||
Sbjct 1079 CAGAATGTGAACAAAGT 1095
Score = 34.2 bits (17), Expect = 1.1
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTG 47
|||||||||||||||||
Sbjct 1095 ACTTTGTTCACATTCTG 1079
> gi|1034580291|ref|XM_011538525.2| PREDICTED: Homo sapiens solute
carrier family 6 member 15 (SLC6A15), transcript variant
X1, mRNA
Length=2370
Score = 34.2 bits (17), Expect = 1.1
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Plus
Query 2 CAGAATGTGAACAAAGT 18
|||||||||||||||||
Sbjct 1126 CAGAATGTGAACAAAGT 1142
Score = 34.2 bits (17), Expect = 1.1
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTG 47
|||||||||||||||||
Sbjct 1142 ACTTTGTTCACATTCTG 1126
> gi|374858047|ref|NM_182767.5| Homo sapiens solute carrier family
6 member 15 (SLC6A15), transcript variant 1, mRNA
Length=4841
Score = 34.2 bits (17), Expect = 1.1
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Plus
Query 2 CAGAATGTGAACAAAGT 18
|||||||||||||||||
Sbjct 1079 CAGAATGTGAACAAAGT 1095
Score = 34.2 bits (17), Expect = 1.1
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTG 47
|||||||||||||||||
Sbjct 1095 ACTTTGTTCACATTCTG 1079
> gi|374858049|ref|NM_001146335.2| Homo sapiens solute carrier
family 6 member 15 (SLC6A15), transcript variant 3, mRNA
Length=4364
Score = 34.2 bits (17), Expect = 1.1
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Plus
Query 2 CAGAATGTGAACAAAGT 18
|||||||||||||||||
Sbjct 602 CAGAATGTGAACAAAGT 618
Score = 34.2 bits (17), Expect = 1.1
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTG 47
|||||||||||||||||
Sbjct 618 ACTTTGTTCACATTCTG 602
> gi|1034638729|ref|XM_017007838.1| PREDICTED: Homo sapiens Ras
association domain family member 6 (RASSF6), transcript variant
X7, mRNA
Length=3323
Score = 34.2 bits (17), Expect = 1.1
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Plus
Query 37 TTCACATTCTGCTTTTT 53
|||||||||||||||||
Sbjct 1112 TTCACATTCTGCTTTTT 1128
> gi|1034569605|ref|XM_011519691.2| PREDICTED: Homo sapiens family
with sequence similarity 188 member A (FAM188A), transcript
variant X4, mRNA
Length=5309
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 32 CTTTGTTCACATTCTG 47
||||||||||||||||
Sbjct 2219 CTTTGTTCACATTCTG 2234
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 2 CAGAATGTGAACAAAG 17
||||||||||||||||
Sbjct 2234 CAGAATGTGAACAAAG 2219
> gi|1034651410|ref|XM_011514825.2| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X27, mRNA
Length=17917
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 8033 ACTTTGTTTACATTCTGCTT 8014
> gi|1034651390|ref|XM_017011214.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X14, mRNA
Length=23951
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14394 ACTTTGTTTACATTCTGCTT 14375
> gi|1034651404|ref|XM_017011218.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X24, mRNA
Length=20053
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 10003 ACTTTGTTTACATTCTGCTT 9984
> gi|1034651403|ref|XM_005249324.2| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X23, mRNA
Length=22892
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 12842 ACTTTGTTTACATTCTGCTT 12823
> gi|1034651413|ref|XM_017011222.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X29, mRNA
Length=18341
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 8291 ACTTTGTTTACATTCTGCTT 8272
> gi|1034651387|ref|XM_005249316.2| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X12, mRNA
Length=24657
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14607 ACTTTGTTTACATTCTGCTT 14588
> gi|1034651399|ref|XM_005249322.4| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X20, mRNA
Length=23947
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 13897 ACTTTGTTTACATTCTGCTT 13878
> gi|1034651398|ref|XM_005249320.4| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X19, mRNA
Length=24052
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14002 ACTTTGTTTACATTCTGCTT 13983
> gi|1034651400|ref|XM_017011217.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X21, mRNA
Length=24025
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 13975 ACTTTGTTTACATTCTGCTT 13956
> gi|1034651402|ref|XM_005249323.3| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X22, mRNA
Length=24280
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14230 ACTTTGTTTACATTCTGCTT 14211
> gi|1034651394|ref|XM_005249318.2| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X16, mRNA
Length=24095
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14045 ACTTTGTTTACATTCTGCTT 14026
> gi|1034651397|ref|XM_005249319.2| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X18, mRNA
Length=23996
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 13946 ACTTTGTTTACATTCTGCTT 13927
> gi|1034651406|ref|XM_017011219.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X25, mRNA
Length=18182
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 8132 ACTTTGTTTACATTCTGCTT 8113
> gi|1034651415|ref|XM_017011223.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X30, mRNA
Length=17855
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 8132 ACTTTGTTTACATTCTGCTT 8113
> gi|1034651411|ref|XM_017011221.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X28, mRNA
Length=17948
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 7898 ACTTTGTTTACATTCTGCTT 7879
> gi|1034651388|ref|XM_017011213.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X13, mRNA
Length=24117
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14394 ACTTTGTTTACATTCTGCTT 14375
> gi|1034651385|ref|XM_017011212.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X11, mRNA
Length=24210
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14160 ACTTTGTTTACATTCTGCTT 14141
> gi|1034651373|ref|XM_017011207.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X4, mRNA
Length=24381
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14331 ACTTTGTTTACATTCTGCTT 14312
> gi|1034651379|ref|XM_011514824.2| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X7, mRNA
Length=24345
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14295 ACTTTGTTTACATTCTGCTT 14276
> gi|1034651372|ref|XM_005249310.3| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X3, mRNA
Length=24434
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14384 ACTTTGTTTACATTCTGCTT 14365
> gi|1034651382|ref|XM_005249315.3| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X9, mRNA
Length=24381
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14331 ACTTTGTTTACATTCTGCTT 14312
> gi|1034651408|ref|XM_017011220.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X26, mRNA
Length=18125
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 8075 ACTTTGTTTACATTCTGCTT 8056
> gi|1034651421|ref|XM_011514826.2| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X33, mRNA
Length=23910
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14230 ACTTTGTTTACATTCTGCTT 14211
> gi|1034651417|ref|XM_017011224.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X31, mRNA
Length=17652
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 7972 ACTTTGTTTACATTCTGCTT 7953
> gi|1034651368|ref|XM_017011205.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X1, mRNA
Length=24512
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14394 ACTTTGTTTACATTCTGCTT 14375
> gi|1034651380|ref|XM_017011210.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X8, mRNA
Length=24401
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14394 ACTTTGTTTACATTCTGCTT 14375
> gi|1034651375|ref|XM_017011208.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X5, mRNA
Length=24440
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14394 ACTTTGTTTACATTCTGCTT 14375
> gi|1034651383|ref|XM_017011211.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X10, mRNA
Length=24329
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14394 ACTTTGTTTACATTCTGCTT 14375
> gi|1034651370|ref|XM_017011206.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X2, mRNA
Length=24494
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14394 ACTTTGTTTACATTCTGCTT 14375
> gi|1034651377|ref|XM_017011209.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X6, mRNA
Length=24422
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14394 ACTTTGTTTACATTCTGCTT 14375
> gi|1034651392|ref|XM_017011215.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X15, mRNA
Length=24074
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14394 ACTTTGTTTACATTCTGCTT 14375
> gi|1034651395|ref|XM_017011216.1| PREDICTED: Homo sapiens dystonin
(DST), transcript variant X17, mRNA
Length=24002
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 14394 ACTTTGTTTACATTCTGCTT 14375
> gi|291290967|ref|NM_015548.4| Homo sapiens dystonin (DST), transcript
variant 1eA, mRNA
Length=16652
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 6587 ACTTTGTTTACATTCTGCTT 6568
> gi|469832269|ref|NM_183380.3| Homo sapiens dystonin (DST), transcript
variant 1, mRNA
Length=18048
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 7977 ACTTTGTTTACATTCTGCTT 7958
> gi|221316621|ref|NM_001144770.1| Homo sapiens dystonin (DST),
transcript variant 3, mRNA
Length=17774
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 7703 ACTTTGTTTACATTCTGCTT 7684
> gi|469832270|ref|NM_001144769.2| Homo sapiens dystonin (DST),
transcript variant 2, mRNA
Length=18103
Score = 32.2 bits (16), Expect = 4.3
Identities = 19/20 (95%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 31 ACTTTGTTCACATTCTGCTT 50
|||||||| |||||||||||
Sbjct 8032 ACTTTGTTTACATTCTGCTT 8013
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 21612390383
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2