BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= GAGCTGTCTACGCAAGTCCC (evalue = 10)
Length=20
Score E
Sequences producing significant alignments: (Bits) Value
gi|1022430576|ref|NM_001323987.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022438420|ref|NM_001324004.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022438060|ref|NM_001324008.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022434815|ref|NM_001323989.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022428962|ref|NM_001324011.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022432122|ref|NM_001323995.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022433158|ref|NM_001324006.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022436022|ref|NM_001323992.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022436097|ref|NM_001323997.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022438445|ref|NM_001323988.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022432087|ref|NM_001323994.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022434844|ref|NM_001324001.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|594140511|ref|NM_001290312.1| Homo sapiens catenin alpha 1 (... 40.1 0.002
gi|1022434717|ref|NM_001324002.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022437454|ref|NM_001324009.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022431640|ref|NM_001324013.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022432445|ref|NM_001324000.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022435197|ref|NM_001323991.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022433997|ref|NM_001323990.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022430583|ref|NM_001324003.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022433954|ref|NM_001324007.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022437051|ref|NM_001323999.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022436034|ref|NM_001323998.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022438017|ref|NM_001324005.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022438036|ref|NM_001323993.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022433223|ref|NM_001323996.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022433202|ref|NM_001323983.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022434009|ref|NM_001290309.2| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022432228|ref|NM_001290310.2| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022431655|ref|NM_001323986.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022436142|ref|NM_001323985.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022430604|ref|NM_001903.4| Homo sapiens catenin alpha 1 (CT... 40.1 0.002
gi|1022436549|ref|NM_001290307.2| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022434282|ref|NM_001323984.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|1022434685|ref|NM_001323982.1| Homo sapiens catenin alpha 1 ... 40.1 0.002
gi|194578903|ref|NM_022566.2| Homo sapiens mesoderm development... 34.2 0.12
gi|1034597705|ref|XR_001752401.1| PREDICTED: Homo sapiens ATP b... 30.2 1.9
gi|572882596|ref|NM_001288985.1| Homo sapiens ATP binding casse... 30.2 1.9
gi|572882682|ref|NM_001288986.1| Homo sapiens ATP binding casse... 30.2 1.9
gi|572882629|ref|NM_007168.3| Homo sapiens ATP binding cassette... 30.2 1.9
gi|1034597707|ref|XR_001752402.1| PREDICTED: Homo sapiens ATP b... 30.2 1.9
gi|1034597703|ref|XM_005256938.2| PREDICTED: Homo sapiens ATP b... 30.2 1.9
gi|1034597704|ref|XM_005256940.4| PREDICTED: Homo sapiens ATP b... 30.2 1.9
> gi|1022430576|ref|NM_001323987.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 11, mRNA
Length=2802
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 282 GAGCTGTCTACGCAAGTCCC 263
> gi|1022438420|ref|NM_001324004.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 28, mRNA
Length=2873
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 282 GAGCTGTCTACGCAAGTCCC 263
> gi|1022438060|ref|NM_001324008.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 32, mRNA
Length=2860
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 282 GAGCTGTCTACGCAAGTCCC 263
> gi|1022434815|ref|NM_001323989.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 13, mRNA
Length=2898
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 378 GAGCTGTCTACGCAAGTCCC 359
> gi|1022428962|ref|NM_001324011.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 35, mRNA
Length=2933
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 506 GAGCTGTCTACGCAAGTCCC 487
> gi|1022432122|ref|NM_001323995.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 19, mRNA
Length=3026
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 506 GAGCTGTCTACGCAAGTCCC 487
> gi|1022433158|ref|NM_001324006.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 30, mRNA
Length=3084
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 506 GAGCTGTCTACGCAAGTCCC 487
> gi|1022436022|ref|NM_001323992.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 16, mRNA
Length=3042
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 522 GAGCTGTCTACGCAAGTCCC 503
> gi|1022436097|ref|NM_001323997.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 21, mRNA
Length=3045
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 525 GAGCTGTCTACGCAAGTCCC 506
> gi|1022438445|ref|NM_001323988.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 12, mRNA
Length=3050
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 530 GAGCTGTCTACGCAAGTCCC 511
> gi|1022432087|ref|NM_001323994.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 18, mRNA
Length=2811
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 291 GAGCTGTCTACGCAAGTCCC 272
> gi|1022434844|ref|NM_001324001.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 25, mRNA
Length=2978
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 593 GAGCTGTCTACGCAAGTCCC 574
> gi|594140511|ref|NM_001290312.1| Homo sapiens catenin alpha 1
(CTNNA1), transcript variant 5, mRNA
Length=3121
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 593 GAGCTGTCTACGCAAGTCCC 574
> gi|1022434717|ref|NM_001324002.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 26, mRNA
Length=3184
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 593 GAGCTGTCTACGCAAGTCCC 574
> gi|1022437454|ref|NM_001324009.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 33, mRNA
Length=3171
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 593 GAGCTGTCTACGCAAGTCCC 574
> gi|1022431640|ref|NM_001324013.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 37, mRNA
Length=3142
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 593 GAGCTGTCTACGCAAGTCCC 574
> gi|1022432445|ref|NM_001324000.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 24, mRNA
Length=3206
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 686 GAGCTGTCTACGCAAGTCCC 667
> gi|1022435197|ref|NM_001323991.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 15, mRNA
Length=3209
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 689 GAGCTGTCTACGCAAGTCCC 670
> gi|1022433997|ref|NM_001323990.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 14, mRNA
Length=3262
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 742 GAGCTGTCTACGCAAGTCCC 723
> gi|1022430583|ref|NM_001324003.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 27, mRNA
Length=3333
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 742 GAGCTGTCTACGCAAGTCCC 723
> gi|1022433954|ref|NM_001324007.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 31, mRNA
Length=3320
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 742 GAGCTGTCTACGCAAGTCCC 723
> gi|1022437051|ref|NM_001323999.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 23, mRNA
Length=3334
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 814 GAGCTGTCTACGCAAGTCCC 795
> gi|1022436034|ref|NM_001323998.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 22, mRNA
Length=3337
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 817 GAGCTGTCTACGCAAGTCCC 798
> gi|1022438017|ref|NM_001324005.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 29, mRNA
Length=3408
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 817 GAGCTGTCTACGCAAGTCCC 798
> gi|1022438036|ref|NM_001323993.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 17, mRNA
Length=3356
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 836 GAGCTGTCTACGCAAGTCCC 817
> gi|1022433223|ref|NM_001323996.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 20, mRNA
Length=3361
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 841 GAGCTGTCTACGCAAGTCCC 822
> gi|1022433202|ref|NM_001323983.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 7, mRNA
Length=3945
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 1425 GAGCTGTCTACGCAAGTCCC 1406
> gi|1022434009|ref|NM_001290309.2| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 3, mRNA
Length=3605
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 1077 GAGCTGTCTACGCAAGTCCC 1058
> gi|1022432228|ref|NM_001290310.2| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 4, mRNA
Length=3638
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 1110 GAGCTGTCTACGCAAGTCCC 1091
> gi|1022431655|ref|NM_001323986.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 10, mRNA
Length=3700
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 1273 GAGCTGTCTACGCAAGTCCC 1254
> gi|1022436142|ref|NM_001323985.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 9, mRNA
Length=3766
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 1273 GAGCTGTCTACGCAAGTCCC 1254
> gi|1022430604|ref|NM_001903.4| Homo sapiens catenin alpha 1 (CTNNA1),
transcript variant 1, mRNA
Length=3801
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 1273 GAGCTGTCTACGCAAGTCCC 1254
> gi|1022436549|ref|NM_001290307.2| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 2, mRNA
Length=3872
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 1273 GAGCTGTCTACGCAAGTCCC 1254
> gi|1022434282|ref|NM_001323984.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 8, mRNA
Length=3811
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 1291 GAGCTGTCTACGCAAGTCCC 1272
> gi|1022434685|ref|NM_001323982.1| Homo sapiens catenin alpha
1 (CTNNA1), transcript variant 6, mRNA
Length=4263
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 GAGCTGTCTACGCAAGTCCC 20
||||||||||||||||||||
Sbjct 1743 GAGCTGTCTACGCAAGTCCC 1724
> gi|194578903|ref|NM_022566.2| Homo sapiens mesoderm development
candidate 1 (MESDC1), mRNA
Length=3068
Score = 34.2 bits (17), Expect = 0.12
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Minus
Query 3 GCTGTCTACGCAAGTCC 19
|||||||||||||||||
Sbjct 389 GCTGTCTACGCAAGTCC 373
> gi|1034597705|ref|XR_001752401.1| PREDICTED: Homo sapiens ATP
binding cassette subfamily A member 8 (ABCA8), transcript variant
X3, misc_RNA
Length=5999
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 2 AGCTGTCTACGCAAG 16
|||||||||||||||
Sbjct 4182 AGCTGTCTACGCAAG 4196
> gi|572882596|ref|NM_001288985.1| Homo sapiens ATP binding cassette
subfamily A member 8 (ABCA8), transcript variant 1, mRNA
Length=6012
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 2 AGCTGTCTACGCAAG 16
|||||||||||||||
Sbjct 4187 AGCTGTCTACGCAAG 4201
> gi|572882682|ref|NM_001288986.1| Homo sapiens ATP binding cassette
subfamily A member 8 (ABCA8), transcript variant 3, mRNA
Length=5836
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 2 AGCTGTCTACGCAAG 16
|||||||||||||||
Sbjct 4011 AGCTGTCTACGCAAG 4025
> gi|572882629|ref|NM_007168.3| Homo sapiens ATP binding cassette
subfamily A member 8 (ABCA8), transcript variant 2, mRNA
Length=5731
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 2 AGCTGTCTACGCAAG 16
|||||||||||||||
Sbjct 3906 AGCTGTCTACGCAAG 3920
> gi|1034597707|ref|XR_001752402.1| PREDICTED: Homo sapiens ATP
binding cassette subfamily A member 8 (ABCA8), transcript variant
X5, misc_RNA
Length=5929
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 2 AGCTGTCTACGCAAG 16
|||||||||||||||
Sbjct 4112 AGCTGTCTACGCAAG 4126
> gi|1034597703|ref|XM_005256938.2| PREDICTED: Homo sapiens ATP
binding cassette subfamily A member 8 (ABCA8), transcript variant
X1, mRNA
Length=5873
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 2 AGCTGTCTACGCAAG 16
|||||||||||||||
Sbjct 4054 AGCTGTCTACGCAAG 4068
> gi|1034597704|ref|XM_005256940.4| PREDICTED: Homo sapiens ATP
binding cassette subfamily A member 8 (ABCA8), transcript variant
X2, mRNA
Length=5778
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 2 AGCTGTCTACGCAAG 16
|||||||||||||||
Sbjct 3959 AGCTGTCTACGCAAG 3973
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2337180340
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2