BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= GAACAAAGGCTACCTGGTATTCTCGAGAATACCAGGTAGCCTTTGTTCTTTTTT (evalue = 10)
Length=54
Score E
Sequences producing significant alignments: (Bits) Value
gi|283135239|ref|NM_020155.3| Homo sapiens G protein-coupled re... 42.1 0.005
gi|283135241|ref|NM_001170880.1| Homo sapiens G protein-coupled... 42.1 0.005
gi|767968521|ref|XM_005274100.2| PREDICTED: Homo sapiens G prot... 42.1 0.005
gi|767968523|ref|XM_011545169.1| PREDICTED: Homo sapiens G prot... 42.1 0.005
gi|1034574555|ref|XM_017018015.1| PREDICTED: Homo sapiens G pro... 42.1 0.005
gi|767968522|ref|XM_005274104.2| PREDICTED: Homo sapiens G prot... 42.1 0.005
gi|767968520|ref|XM_005274102.2| PREDICTED: Homo sapiens G prot... 42.1 0.005
gi|283135213|ref|NM_001170881.1| Homo sapiens G protein-coupled... 42.1 0.005
gi|293629301|ref|NM_001177358.1| Homo sapiens G protein-coupled... 42.1 0.005
gi|767968519|ref|XM_005274101.2| PREDICTED: Homo sapiens G prot... 42.1 0.005
gi|1034574553|ref|XM_017018014.1| PREDICTED: Homo sapiens G pro... 42.1 0.005
gi|283135191|ref|NM_001170726.1| Homo sapiens G protein-coupled... 42.1 0.005
gi|1034574557|ref|XM_017018016.1| PREDICTED: Homo sapiens G pro... 42.1 0.005
gi|1034574559|ref|XM_011545171.2| PREDICTED: Homo sapiens G pro... 42.1 0.005
gi|1034574560|ref|XM_011545172.2| PREDICTED: Homo sapiens G pro... 42.1 0.005
gi|1034574551|ref|XM_011545168.2| PREDICTED: Homo sapiens G pro... 42.1 0.005
gi|1034574552|ref|XM_011545170.2| PREDICTED: Homo sapiens G pro... 42.1 0.005
gi|1034692603|ref|XR_001754260.1| PREDICTED: Homo sapiens uncha... 32.2 4.3
gi|1034692597|ref|XR_001754259.1| PREDICTED: Homo sapiens uncha... 32.2 4.3
gi|1034692604|ref|XR_001754261.1| PREDICTED: Homo sapiens uncha... 32.2 4.3
gi|1034692605|ref|XR_001754262.1| PREDICTED: Homo sapiens uncha... 32.2 4.3
gi|365192551|ref|NM_006901.3| Homo sapiens myosin IXA (MYO9A), ... 32.2 4.3
gi|1034590736|ref|XM_011521614.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590743|ref|XM_017022228.1| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590748|ref|XM_017022229.1| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590752|ref|XM_011521623.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590735|ref|XM_011521613.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590740|ref|XM_011521618.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590739|ref|XM_011521617.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590741|ref|XM_006720539.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590747|ref|XM_011521622.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590746|ref|XM_011521621.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590742|ref|XM_011521619.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590745|ref|XM_011521620.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590750|ref|XM_017022230.1| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590737|ref|XM_011521616.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034590738|ref|XM_011521615.2| PREDICTED: Homo sapiens myosi... 32.2 4.3
gi|1034642625|ref|XR_001741695.1| PREDICTED: Homo sapiens uncha... 32.2 4.3
gi|1034642619|ref|XR_001741694.1| PREDICTED: Homo sapiens uncha... 32.2 4.3
gi|1034642626|ref|XR_001741696.1| PREDICTED: Homo sapiens uncha... 32.2 4.3
gi|1034642627|ref|XR_001741697.1| PREDICTED: Homo sapiens uncha... 32.2 4.3
gi|1034633985|ref|XM_011533847.2| PREDICTED: Homo sapiens solut... 32.2 4.3
gi|197304679|ref|NM_020208.3| Homo sapiens solute carrier famil... 32.2 4.3
gi|197304678|ref|NM_022405.3| Homo sapiens solute carrier famil... 32.2 4.3
> gi|283135239|ref|NM_020155.3| Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant 3, mRNA
Length=1822
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 1222 GAACAAAGGCTACCTGGTATT 1242
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1242 AATACCAGGTAGCCTTTGTTC 1222
> gi|283135241|ref|NM_001170880.1| Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant 2, mRNA
Length=1928
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 1222 GAACAAAGGCTACCTGGTATT 1242
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1242 AATACCAGGTAGCCTTTGTTC 1222
> gi|767968521|ref|XM_005274100.2| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X4,
mRNA
Length=1813
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 1237 GAACAAAGGCTACCTGGTATT 1257
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1257 AATACCAGGTAGCCTTTGTTC 1237
> gi|767968523|ref|XM_011545169.1| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X6,
mRNA
Length=1442
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 866 GAACAAAGGCTACCTGGTATT 886
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 886 AATACCAGGTAGCCTTTGTTC 866
> gi|1034574555|ref|XM_017018015.1| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X9,
mRNA
Length=1548
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 866 GAACAAAGGCTACCTGGTATT 886
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 886 AATACCAGGTAGCCTTTGTTC 866
> gi|767968522|ref|XM_005274104.2| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X5,
mRNA
Length=1477
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 901 GAACAAAGGCTACCTGGTATT 921
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 921 AATACCAGGTAGCCTTTGTTC 901
> gi|767968520|ref|XM_005274102.2| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X3,
mRNA
Length=1529
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 953 GAACAAAGGCTACCTGGTATT 973
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 973 AATACCAGGTAGCCTTTGTTC 953
> gi|283135213|ref|NM_001170881.1| Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant 1, mRNA
Length=1946
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 1240 GAACAAAGGCTACCTGGTATT 1260
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1260 AATACCAGGTAGCCTTTGTTC 1240
> gi|293629301|ref|NM_001177358.1| Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant 5, mRNA
Length=1861
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 1274 GAACAAAGGCTACCTGGTATT 1294
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1294 AATACCAGGTAGCCTTTGTTC 1274
> gi|767968519|ref|XM_005274101.2| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X2,
mRNA
Length=2013
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 1437 GAACAAAGGCTACCTGGTATT 1457
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1457 AATACCAGGTAGCCTTTGTTC 1437
> gi|1034574553|ref|XM_017018014.1| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X8,
mRNA
Length=2119
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 1437 GAACAAAGGCTACCTGGTATT 1457
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1457 AATACCAGGTAGCCTTTGTTC 1437
> gi|283135191|ref|NM_001170726.1| Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant 4, mRNA
Length=1609
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 1009 GAACAAAGGCTACCTGGTATT 1029
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1029 AATACCAGGTAGCCTTTGTTC 1009
> gi|1034574557|ref|XM_017018016.1| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X10,
mRNA
Length=1573
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 997 GAACAAAGGCTACCTGGTATT 1017
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1017 AATACCAGGTAGCCTTTGTTC 997
> gi|1034574559|ref|XM_011545171.2| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X11,
mRNA
Length=1679
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 997 GAACAAAGGCTACCTGGTATT 1017
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1017 AATACCAGGTAGCCTTTGTTC 997
> gi|1034574560|ref|XM_011545172.2| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X12,
mRNA
Length=1710
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 1147 GAACAAAGGCTACCTGGTATT 1167
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1167 AATACCAGGTAGCCTTTGTTC 1147
> gi|1034574551|ref|XM_011545168.2| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X1,
mRNA
Length=1723
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 1147 GAACAAAGGCTACCTGGTATT 1167
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1167 AATACCAGGTAGCCTTTGTTC 1147
> gi|1034574552|ref|XM_011545170.2| PREDICTED: Homo sapiens G protein-coupled
receptor 137 (GPR137), transcript variant X7,
mRNA
Length=1829
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Plus
Query 1 GAACAAAGGCTACCTGGTATT 21
|||||||||||||||||||||
Sbjct 1147 GAACAAAGGCTACCTGGTATT 1167
Score = 42.1 bits (21), Expect = 0.005
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 28 AATACCAGGTAGCCTTTGTTC 48
|||||||||||||||||||||
Sbjct 1167 AATACCAGGTAGCCTTTGTTC 1147
> gi|1034692603|ref|XR_001754260.1| PREDICTED: Homo sapiens uncharacterized
LOC105377663 (LOC105377663), transcript variant
X7, ncRNA
Length=959
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 872 TAGCCTTTGTTCTTTT 857
> gi|1034692597|ref|XR_001754259.1| PREDICTED: Homo sapiens uncharacterized
LOC105377663 (LOC105377663), transcript variant
X1, ncRNA
Length=891
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 804 TAGCCTTTGTTCTTTT 789
> gi|1034692604|ref|XR_001754261.1| PREDICTED: Homo sapiens uncharacterized
LOC105377663 (LOC105377663), transcript variant
X8, ncRNA
Length=1659
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 694 TAGCCTTTGTTCTTTT 679
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 1572 TAGCCTTTGTTCTTTT 1557
> gi|1034692605|ref|XR_001754262.1| PREDICTED: Homo sapiens uncharacterized
LOC105377663 (LOC105377663), transcript variant
X9, ncRNA
Length=1510
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 694 TAGCCTTTGTTCTTTT 679
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 1423 TAGCCTTTGTTCTTTT 1408
> gi|365192551|ref|NM_006901.3| Homo sapiens myosin IXA (MYO9A),
mRNA
Length=8722
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3989 TAGCCTTTGTTCTTTT 3974
> gi|1034590736|ref|XM_011521614.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X2, mRNA
Length=12383
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3675 TAGCCTTTGTTCTTTT 3660
> gi|1034590743|ref|XM_017022228.1| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X9, mRNA
Length=12326
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3618 TAGCCTTTGTTCTTTT 3603
> gi|1034590748|ref|XM_017022229.1| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X13, mRNA
Length=12316
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3824 TAGCCTTTGTTCTTTT 3809
> gi|1034590752|ref|XM_011521623.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X15, mRNA
Length=9801
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 1092 TAGCCTTTGTTCTTTT 1077
> gi|1034590735|ref|XM_011521613.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X1, mRNA
Length=12698
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3989 TAGCCTTTGTTCTTTT 3974
> gi|1034590740|ref|XM_011521618.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X6, mRNA
Length=12644
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3989 TAGCCTTTGTTCTTTT 3974
> gi|1034590739|ref|XM_011521617.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X5, mRNA
Length=12695
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3989 TAGCCTTTGTTCTTTT 3974
> gi|1034590741|ref|XM_006720539.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X7, mRNA
Length=12641
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3989 TAGCCTTTGTTCTTTT 3974
> gi|1034590747|ref|XM_011521622.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X12, mRNA
Length=12482
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3989 TAGCCTTTGTTCTTTT 3974
> gi|1034590746|ref|XM_011521621.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X11, mRNA
Length=12578
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3869 TAGCCTTTGTTCTTTT 3854
> gi|1034590742|ref|XM_011521619.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X8, mRNA
Length=12641
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3932 TAGCCTTTGTTCTTTT 3917
> gi|1034590745|ref|XM_011521620.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X10, mRNA
Length=12638
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3932 TAGCCTTTGTTCTTTT 3917
> gi|1034590750|ref|XM_017022230.1| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X14, mRNA
Length=12425
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3932 TAGCCTTTGTTCTTTT 3917
> gi|1034590737|ref|XM_011521616.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X3, mRNA
Length=12345
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3636 TAGCCTTTGTTCTTTT 3621
> gi|1034590738|ref|XM_011521615.2| PREDICTED: Homo sapiens myosin
IXA (MYO9A), transcript variant X4, mRNA
Length=12551
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 3842 TAGCCTTTGTTCTTTT 3827
> gi|1034642625|ref|XR_001741695.1| PREDICTED: Homo sapiens uncharacterized
LOC105377663 (LOC105377663), transcript variant
X7, ncRNA
Length=959
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 872 TAGCCTTTGTTCTTTT 857
> gi|1034642619|ref|XR_001741694.1| PREDICTED: Homo sapiens uncharacterized
LOC105377663 (LOC105377663), transcript variant
X1, ncRNA
Length=891
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 804 TAGCCTTTGTTCTTTT 789
> gi|1034642626|ref|XR_001741696.1| PREDICTED: Homo sapiens uncharacterized
LOC105377663 (LOC105377663), transcript variant
X8, ncRNA
Length=1659
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 694 TAGCCTTTGTTCTTTT 679
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 1572 TAGCCTTTGTTCTTTT 1557
> gi|1034642627|ref|XR_001741697.1| PREDICTED: Homo sapiens uncharacterized
LOC105377663 (LOC105377663), transcript variant
X9, ncRNA
Length=1510
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 694 TAGCCTTTGTTCTTTT 679
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 37 TAGCCTTTGTTCTTTT 52
||||||||||||||||
Sbjct 1423 TAGCCTTTGTTCTTTT 1408
> gi|1034633985|ref|XM_011533847.2| PREDICTED: Homo sapiens solute
carrier family 6 member 20 (SLC6A20), transcript variant
X1, mRNA
Length=5746
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 27 GAATACCAGGTAGCCT 42
||||||||||||||||
Sbjct 4975 GAATACCAGGTAGCCT 4990
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 7 AGGCTACCTGGTATTC 22
||||||||||||||||
Sbjct 4990 AGGCTACCTGGTATTC 4975
> gi|197304679|ref|NM_020208.3| Homo sapiens solute carrier family
6 member 20 (SLC6A20), transcript variant 1, mRNA
Length=5455
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 27 GAATACCAGGTAGCCT 42
||||||||||||||||
Sbjct 4661 GAATACCAGGTAGCCT 4676
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 7 AGGCTACCTGGTATTC 22
||||||||||||||||
Sbjct 4676 AGGCTACCTGGTATTC 4661
> gi|197304678|ref|NM_022405.3| Homo sapiens solute carrier family
6 member 20 (SLC6A20), transcript variant 2, mRNA
Length=5344
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 27 GAATACCAGGTAGCCT 42
||||||||||||||||
Sbjct 4550 GAATACCAGGTAGCCT 4565
Score = 32.2 bits (16), Expect = 4.3
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 7 AGGCTACCTGGTATTC 22
||||||||||||||||
Sbjct 4565 AGGCTACCTGGTATTC 4550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 21612390383
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2