BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= CTTGGGACATCTGCCAAAGT (evalue = 10)
Length=20
Score E
Sequences producing significant alignments: (Bits) Value
gi|1034605112|ref|XR_001753309.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605110|ref|XR_001753307.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605102|ref|XM_011525775.2| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605103|ref|XM_017026105.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605105|ref|XM_011525779.2| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605108|ref|XM_017026107.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605111|ref|XR_001753308.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605106|ref|XM_017026106.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|767997972|ref|XM_011525776.1| PREDICTED: Homo sapiens protei... 40.1 0.002
gi|391224432|ref|NM_001042388.2| Homo sapiens protein phosphata... 40.1 0.002
gi|391224433|ref|NM_005134.3| Homo sapiens protein phosphatase ... 40.1 0.002
gi|391224434|ref|NR_052003.1| Homo sapiens protein phosphatase ... 40.1 0.002
gi|571026675|ref|NM_001288777.1| Homo sapiens solute carrier fa... 32.2 0.47
gi|117553618|ref|NM_001077516.1| Homo sapiens solute carrier fa... 32.2 0.47
gi|117553607|ref|NM_006979.2| Homo sapiens solute carrier famil... 32.2 0.47
gi|546230856|ref|NM_001284287.1| Homo sapiens inositol polyphos... 30.2 1.9
gi|547235299|ref|NM_001002837.2| Homo sapiens inositol polyphos... 30.2 1.9
gi|546230865|ref|NM_001284288.1| Homo sapiens inositol polyphos... 30.2 1.9
gi|546230989|ref|NM_001284285.1| Homo sapiens inositol polyphos... 30.2 1.9
gi|546231862|ref|NM_001284289.1| Homo sapiens inositol polyphos... 30.2 1.9
gi|546231221|ref|NM_001284286.1| Homo sapiens inositol polyphos... 30.2 1.9
gi|1034628835|ref|XM_017028772.1| PREDICTED: Homo sapiens inosi... 30.2 1.9
gi|1034628837|ref|XM_017028773.1| PREDICTED: Homo sapiens inosi... 30.2 1.9
gi|768024644|ref|XM_011530143.1| PREDICTED: Homo sapiens inosit... 30.2 1.9
gi|1034628833|ref|XM_017028771.1| PREDICTED: Homo sapiens inosi... 30.2 1.9
gi|1034590082|ref|XM_017022022.1| PREDICTED: Homo sapiens TBC1 ... 30.2 1.9
gi|194018477|ref|NM_144572.1| Homo sapiens TBC1 domain family m... 30.2 1.9
gi|194018475|ref|NM_015079.5| Homo sapiens TBC1 domain family m... 30.2 1.9
gi|1034590081|ref|XR_001751163.1| PREDICTED: Homo sapiens TBC1 ... 30.2 1.9
gi|1034590079|ref|XM_011521387.2| PREDICTED: Homo sapiens TBC1 ... 30.2 1.9
gi|1034561413|ref|XM_017002194.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561405|ref|XR_949157.2| PREDICTED: Homo sapiens TAR (HIV... 30.2 1.9
gi|1034561411|ref|XR_001737380.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561410|ref|XR_949158.2| PREDICTED: Homo sapiens TAR (HIV... 30.2 1.9
gi|1034561412|ref|XR_001737381.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561406|ref|XR_001737376.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561415|ref|XR_001737382.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561407|ref|XR_001737377.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561408|ref|XR_001737378.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561409|ref|XR_001737379.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561416|ref|XM_017002195.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561421|ref|XM_017002197.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561418|ref|XR_001737383.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561400|ref|XM_005273234.3| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561401|ref|XM_011544263.2| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561403|ref|XR_001737374.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|1034561402|ref|XR_949155.2| PREDICTED: Homo sapiens TAR (HIV... 30.2 1.9
gi|1034561404|ref|XR_001737375.1| PREDICTED: Homo sapiens TAR (... 30.2 1.9
gi|110825987|ref|NM_005646.3| Homo sapiens TAR (HIV-1) RNA bind... 30.2 1.9
gi|1034690062|ref|XR_919899.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034698590|ref|XR_001759527.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034692823|ref|XR_001754446.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034692824|ref|XR_001754447.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034692825|ref|XR_001754448.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034692827|ref|XR_001754450.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|150036270|ref|NM_004019.2| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|1034673709|ref|XM_006724474.3| PREDICTED: Homo sapiens dystr... 28.2 7.3
gi|238018052|ref|NM_004015.2| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018053|ref|NM_004016.2| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018054|ref|NM_004017.2| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018055|ref|NM_004018.2| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018051|ref|NM_004014.2| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018050|ref|NM_004013.2| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018057|ref|NM_004021.2| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018058|ref|NM_004022.2| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|291490676|ref|NM_004020.3| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018059|ref|NM_004023.2| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018049|ref|NM_004012.3| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018048|ref|NM_004011.3| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018047|ref|NM_004010.3| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018046|ref|NM_004009.3| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|1034673706|ref|XM_006724470.3| PREDICTED: Homo sapiens dystr... 28.2 7.3
gi|238018044|ref|NM_004006.2| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|238018043|ref|NM_000109.3| Homo sapiens dystrophin (DMD), tr... 28.2 7.3
gi|1034673715|ref|XM_017029331.1| PREDICTED: Homo sapiens dystr... 28.2 7.3
gi|768032049|ref|XM_006724468.2| PREDICTED: Homo sapiens dystro... 28.2 7.3
gi|1034673707|ref|XM_017029328.1| PREDICTED: Homo sapiens dystr... 28.2 7.3
gi|768032072|ref|XM_006724475.2| PREDICTED: Homo sapiens dystro... 28.2 7.3
gi|768032064|ref|XM_006724473.2| PREDICTED: Homo sapiens dystro... 28.2 7.3
gi|768032058|ref|XM_011545467.1| PREDICTED: Homo sapiens dystro... 28.2 7.3
gi|1034673705|ref|XM_006724469.3| PREDICTED: Homo sapiens dystr... 28.2 7.3
gi|208973263|ref|NM_004782.3| Homo sapiens synaptosome associat... 28.2 7.3
gi|768017363|ref|XM_011528865.1| PREDICTED: Homo sapiens phosph... 28.2 7.3
gi|33598945|ref|NM_182811.1| Homo sapiens phospholipase C gamma... 28.2 7.3
gi|33598947|ref|NM_002660.2| Homo sapiens phospholipase C gamma... 28.2 7.3
gi|1034625244|ref|XR_001754296.1| PREDICTED: Homo sapiens phosp... 28.2 7.3
gi|1034625243|ref|XR_001754295.1| PREDICTED: Homo sapiens phosp... 28.2 7.3
gi|1034625242|ref|XR_001754294.1| PREDICTED: Homo sapiens phosp... 28.2 7.3
gi|1034625241|ref|XR_001754293.1| PREDICTED: Homo sapiens phosp... 28.2 7.3
gi|768017359|ref|XM_005260438.2| PREDICTED: Homo sapiens phosph... 28.2 7.3
gi|1034626284|ref|XR_937274.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|330688442|ref|NM_001206491.1| Homo sapiens mitochondrial ant... 28.2 7.3
gi|325053646|ref|NR_037921.1| Homo sapiens mitochondrial antivi... 28.2 7.3
gi|325053645|ref|NM_020746.4| Homo sapiens mitochondrial antivi... 28.2 7.3
gi|1034672736|ref|XR_001746759.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|608788356|ref|NM_173832.5| Homo sapiens ZFP41 zinc finger pr... 28.2 7.3
gi|187960061|ref|NM_001003841.2| Homo sapiens solute carrier fa... 28.2 7.3
gi|1034642846|ref|XR_001741796.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034642847|ref|XR_001741797.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034642848|ref|XR_001741798.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034642850|ref|XR_001741800.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|605052064|ref|NR_111932.1| Homo sapiens kinesin family membe... 28.2 7.3
gi|1034613851|ref|XM_011511157.2| PREDICTED: Homo sapiens kines... 28.2 7.3
gi|1034613849|ref|XM_017004062.1| PREDICTED: Homo sapiens kines... 28.2 7.3
gi|352962138|ref|NM_004522.2| Homo sapiens kinesin family membe... 28.2 7.3
gi|1034561379|ref|XM_017002185.1| PREDICTED: Homo sapiens synap... 28.2 7.3
gi|1034561382|ref|XM_011542038.2| PREDICTED: Homo sapiens synap... 28.2 7.3
gi|578799669|ref|XM_006710859.1| PREDICTED: Homo sapiens synapt... 28.2 7.3
gi|530363231|ref|XM_005271156.1| PREDICTED: Homo sapiens synapt... 28.2 7.3
gi|543173119|ref|NM_003176.3| Homo sapiens synaptonemal complex... 28.2 7.3
gi|543173174|ref|NR_104211.1| Homo sapiens synaptonemal complex... 28.2 7.3
gi|543173130|ref|NM_001282542.1| Homo sapiens synaptonemal comp... 28.2 7.3
gi|543173126|ref|NM_001282541.1| Homo sapiens synaptonemal comp... 28.2 7.3
gi|1034561378|ref|XM_005271155.3| PREDICTED: Homo sapiens synap... 28.2 7.3
gi|1034561376|ref|XM_017002184.1| PREDICTED: Homo sapiens synap... 28.2 7.3
gi|426214079|ref|NM_024901.4| Homo sapiens DENN domain containi... 28.2 7.3
gi|426214084|ref|NM_001271833.1| Homo sapiens DENN domain conta... 28.2 7.3
> gi|1034605112|ref|XR_001753309.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X9, misc_RNA
Length=4002
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2715 CTTGGGACATCTGCCAAAGT 2696
> gi|1034605110|ref|XR_001753307.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X7, misc_RNA
Length=4219
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2885 CTTGGGACATCTGCCAAAGT 2866
> gi|1034605102|ref|XM_011525775.2| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X1, mRNA
Length=4095
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2760 CTTGGGACATCTGCCAAAGT 2741
> gi|1034605103|ref|XM_017026105.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X3, mRNA
Length=3936
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2601 CTTGGGACATCTGCCAAAGT 2582
> gi|1034605105|ref|XM_011525779.2| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X4, mRNA
Length=3762
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2427 CTTGGGACATCTGCCAAAGT 2408
> gi|1034605108|ref|XM_017026107.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X6, mRNA
Length=3790
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2453 CTTGGGACATCTGCCAAAGT 2434
> gi|1034605111|ref|XR_001753308.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X8, misc_RNA
Length=4007
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2670 CTTGGGACATCTGCCAAAGT 2651
> gi|1034605106|ref|XM_017026106.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X5, mRNA
Length=3775
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2438 CTTGGGACATCTGCCAAAGT 2419
> gi|767997972|ref|XM_011525776.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X2, mRNA
Length=3961
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2624 CTTGGGACATCTGCCAAAGT 2605
> gi|391224432|ref|NM_001042388.2| Homo sapiens protein phosphatase
4 regulatory subunit 1 (PPP4R1), transcript variant 1,
mRNA
Length=3980
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2634 CTTGGGACATCTGCCAAAGT 2615
> gi|391224433|ref|NM_005134.3| Homo sapiens protein phosphatase
4 regulatory subunit 1 (PPP4R1), transcript variant 2, mRNA
Length=3929
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2583 CTTGGGACATCTGCCAAAGT 2564
> gi|391224434|ref|NR_052003.1| Homo sapiens protein phosphatase
4 regulatory subunit 1 (PPP4R1), transcript variant 3, non-coding
RNA
Length=3947
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAGT 20
||||||||||||||||||||
Sbjct 2601 CTTGGGACATCTGCCAAAGT 2582
> gi|571026675|ref|NM_001288777.1| Homo sapiens solute carrier
family 39 member 7 (SLC39A7), transcript variant 3, mRNA
Length=1888
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 GGGACATCTGCCAAAG 19
||||||||||||||||
Sbjct 1325 GGGACATCTGCCAAAG 1340
> gi|117553618|ref|NM_001077516.1| Homo sapiens solute carrier
family 39 member 7 (SLC39A7), transcript variant 2, mRNA
Length=2172
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 GGGACATCTGCCAAAG 19
||||||||||||||||
Sbjct 1609 GGGACATCTGCCAAAG 1624
> gi|117553607|ref|NM_006979.2| Homo sapiens solute carrier family
39 member 7 (SLC39A7), transcript variant 1, mRNA
Length=2475
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 GGGACATCTGCCAAAG 19
||||||||||||||||
Sbjct 1912 GGGACATCTGCCAAAG 1927
> gi|546230856|ref|NM_001284287.1| Homo sapiens inositol polyphosphate-5-phosphatase
J (INPP5J), transcript variant 4, mRNA
Length=2323
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 TTGGGACATCTGCCA 16
|||||||||||||||
Sbjct 2266 TTGGGACATCTGCCA 2252
> gi|547235299|ref|NM_001002837.2| Homo sapiens inositol polyphosphate-5-phosphatase
J (INPP5J), transcript variant 3, mRNA
Length=2303
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 TTGGGACATCTGCCA 16
|||||||||||||||
Sbjct 2246 TTGGGACATCTGCCA 2232
> gi|546230865|ref|NM_001284288.1| Homo sapiens inositol polyphosphate-5-phosphatase
J (INPP5J), transcript variant 5, mRNA
Length=2481
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 TTGGGACATCTGCCA 16
|||||||||||||||
Sbjct 2424 TTGGGACATCTGCCA 2410
> gi|546230989|ref|NM_001284285.1| Homo sapiens inositol polyphosphate-5-phosphatase
J (INPP5J), transcript variant 1, mRNA
Length=3407
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 TTGGGACATCTGCCA 16
|||||||||||||||
Sbjct 3350 TTGGGACATCTGCCA 3336
> gi|546231862|ref|NM_001284289.1| Homo sapiens inositol polyphosphate-5-phosphatase
J (INPP5J), transcript variant 6, mRNA
Length=2603
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 TTGGGACATCTGCCA 16
|||||||||||||||
Sbjct 2546 TTGGGACATCTGCCA 2532
> gi|546231221|ref|NM_001284286.1| Homo sapiens inositol polyphosphate-5-phosphatase
J (INPP5J), transcript variant 2, mRNA
Length=3529
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 TTGGGACATCTGCCA 16
|||||||||||||||
Sbjct 3472 TTGGGACATCTGCCA 3458
> gi|1034628835|ref|XM_017028772.1| PREDICTED: Homo sapiens inositol
polyphosphate-5-phosphatase J (INPP5J), transcript variant
X2, mRNA
Length=2565
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 TTGGGACATCTGCCA 16
|||||||||||||||
Sbjct 2524 TTGGGACATCTGCCA 2510
> gi|1034628837|ref|XM_017028773.1| PREDICTED: Homo sapiens inositol
polyphosphate-5-phosphatase J (INPP5J), transcript variant
X3, mRNA
Length=2823
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 TTGGGACATCTGCCA 16
|||||||||||||||
Sbjct 2782 TTGGGACATCTGCCA 2768
> gi|768024644|ref|XM_011530143.1| PREDICTED: Homo sapiens inositol
polyphosphate-5-phosphatase J (INPP5J), transcript variant
X4, mRNA
Length=3057
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 TTGGGACATCTGCCA 16
|||||||||||||||
Sbjct 3016 TTGGGACATCTGCCA 3002
> gi|1034628833|ref|XM_017028771.1| PREDICTED: Homo sapiens inositol
polyphosphate-5-phosphatase J (INPP5J), transcript variant
X1, mRNA
Length=4045
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 TTGGGACATCTGCCA 16
|||||||||||||||
Sbjct 4004 TTGGGACATCTGCCA 3990
> gi|1034590082|ref|XM_017022022.1| PREDICTED: Homo sapiens TBC1
domain family member 2B (TBC1D2B), transcript variant X4,
mRNA
Length=6088
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCC 15
|||||||||||||||
Sbjct 3037 CTTGGGACATCTGCC 3023
> gi|194018477|ref|NM_144572.1| Homo sapiens TBC1 domain family
member 2B (TBC1D2B), transcript variant 1, mRNA
Length=6087
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCC 15
|||||||||||||||
Sbjct 3016 CTTGGGACATCTGCC 3002
> gi|194018475|ref|NM_015079.5| Homo sapiens TBC1 domain family
member 2B (TBC1D2B), transcript variant 2, mRNA
Length=6035
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCC 15
|||||||||||||||
Sbjct 2964 CTTGGGACATCTGCC 2950
> gi|1034590081|ref|XR_001751163.1| PREDICTED: Homo sapiens TBC1
domain family member 2B (TBC1D2B), transcript variant X3,
misc_RNA
Length=6005
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCC 15
|||||||||||||||
Sbjct 2954 CTTGGGACATCTGCC 2940
> gi|1034590079|ref|XM_011521387.2| PREDICTED: Homo sapiens TBC1
domain family member 2B (TBC1D2B), transcript variant X1,
mRNA
Length=6012
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCC 15
|||||||||||||||
Sbjct 2961 CTTGGGACATCTGCC 2947
> gi|1034561413|ref|XM_017002194.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X14, mRNA
Length=3882
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1566 CTTGGGACATTTGCCAAAG 1548
> gi|1034561405|ref|XR_949157.2| PREDICTED: Homo sapiens TAR (HIV-1)
RNA binding protein 1 (TARBP1), transcript variant X6,
misc_RNA
Length=4490
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1565 CTTGGGACATTTGCCAAAG 1547
> gi|1034561411|ref|XR_001737380.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X12, misc_RNA
Length=4550
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1566 CTTGGGACATTTGCCAAAG 1548
> gi|1034561410|ref|XR_949158.2| PREDICTED: Homo sapiens TAR (HIV-1)
RNA binding protein 1 (TARBP1), transcript variant X11,
misc_RNA
Length=4554
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1566 CTTGGGACATTTGCCAAAG 1548
> gi|1034561412|ref|XR_001737381.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X13, misc_RNA
Length=9605
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1566 CTTGGGACATTTGCCAAAG 1548
> gi|1034561406|ref|XR_001737376.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X7, misc_RNA
Length=8738
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1567 CTTGGGACATTTGCCAAAG 1549
> gi|1034561415|ref|XR_001737382.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X15, misc_RNA
Length=9537
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1567 CTTGGGACATTTGCCAAAG 1549
> gi|1034561407|ref|XR_001737377.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X8, misc_RNA
Length=8475
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1567 CTTGGGACATTTGCCAAAG 1549
> gi|1034561408|ref|XR_001737378.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X9, misc_RNA
Length=5327
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1566 CTTGGGACATTTGCCAAAG 1548
> gi|1034561409|ref|XR_001737379.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X10, misc_RNA
Length=5231
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1566 CTTGGGACATTTGCCAAAG 1548
> gi|1034561416|ref|XM_017002195.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X16, mRNA
Length=3981
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 369 CTTGGGACATTTGCCAAAG 351
> gi|1034561421|ref|XM_017002197.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X19, mRNA
Length=3721
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 369 CTTGGGACATTTGCCAAAG 351
> gi|1034561418|ref|XR_001737383.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X17, misc_RNA
Length=3794
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 426 CTTGGGACATTTGCCAAAG 408
> gi|1034561400|ref|XM_005273234.3| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X1, mRNA
Length=5105
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1496 CTTGGGACATTTGCCAAAG 1478
> gi|1034561401|ref|XM_011544263.2| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X2, mRNA
Length=5103
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1563 CTTGGGACATTTGCCAAAG 1545
> gi|1034561403|ref|XR_001737374.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X4, misc_RNA
Length=5273
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1565 CTTGGGACATTTGCCAAAG 1547
> gi|1034561402|ref|XR_949155.2| PREDICTED: Homo sapiens TAR (HIV-1)
RNA binding protein 1 (TARBP1), transcript variant X3,
misc_RNA
Length=5005
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1565 CTTGGGACATTTGCCAAAG 1547
> gi|1034561404|ref|XR_001737375.1| PREDICTED: Homo sapiens TAR
(HIV-1) RNA binding protein 1 (TARBP1), transcript variant
X5, misc_RNA
Length=4934
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1566 CTTGGGACATTTGCCAAAG 1548
> gi|110825987|ref|NM_005646.3| Homo sapiens TAR (HIV-1) RNA binding
protein 1 (TARBP1), mRNA
Length=5130
Score = 30.2 bits (15), Expect = 1.9
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 1 CTTGGGACATCTGCCAAAG 19
|||||||||| ||||||||
Sbjct 1496 CTTGGGACATTTGCCAAAG 1478
> gi|1034690062|ref|XR_919899.2| PREDICTED: Homo sapiens uncharacterized
LOC105372535 (LOC105372535), transcript variant X2,
ncRNA
Length=1298
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 1052 GGACATCTGCCAAA 1039
> gi|1034698590|ref|XR_001759527.1| PREDICTED: Homo sapiens uncharacterized
LOC107987083 (LOC107987083), transcript variant
X1, ncRNA
Length=8449
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 TGGGACATCTGCCAAAGT 20
||||| ||||||||||||
Sbjct 6368 TGGGAAATCTGCCAAAGT 6385
> gi|1034692823|ref|XR_001754446.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X1, ncRNA
Length=4501
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 TTGGGACATCTGCC 15
||||||||||||||
Sbjct 848 TTGGGACATCTGCC 861
> gi|1034692824|ref|XR_001754447.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X2, ncRNA
Length=4452
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 TTGGGACATCTGCC 15
||||||||||||||
Sbjct 799 TTGGGACATCTGCC 812
> gi|1034692825|ref|XR_001754448.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X3, ncRNA
Length=4501
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 TTGGGACATCTGCC 15
||||||||||||||
Sbjct 851 TTGGGACATCTGCC 864
> gi|1034692827|ref|XR_001754450.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X5, ncRNA
Length=4360
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 TTGGGACATCTGCC 15
||||||||||||||
Sbjct 852 TTGGGACATCTGCC 865
> gi|150036270|ref|NM_004019.2| Homo sapiens dystrophin (DMD),
transcript variant Dp40, mRNA
Length=1571
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 877 GACATCTGCCAAAG 890
> gi|1034673709|ref|XM_006724474.3| PREDICTED: Homo sapiens dystrophin
(DMD), transcript variant X7, mRNA
Length=13055
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10200 GACATCTGCCAAAG 10213
> gi|238018052|ref|NM_004015.2| Homo sapiens dystrophin (DMD),
transcript variant Dp71, mRNA
Length=4623
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 877 GACATCTGCCAAAG 890
> gi|238018053|ref|NM_004016.2| Homo sapiens dystrophin (DMD),
transcript variant Dp71b, mRNA
Length=4591
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 877 GACATCTGCCAAAG 890
> gi|238018054|ref|NM_004017.2| Homo sapiens dystrophin (DMD),
transcript variant Dp71a, mRNA
Length=4584
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 877 GACATCTGCCAAAG 890
> gi|238018055|ref|NM_004018.2| Homo sapiens dystrophin (DMD),
transcript variant Dp71ab, mRNA
Length=4552
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 877 GACATCTGCCAAAG 890
> gi|238018051|ref|NM_004014.2| Homo sapiens dystrophin (DMD),
transcript variant Dp116, mRNA
Length=5623
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 1877 GACATCTGCCAAAG 1890
> gi|238018050|ref|NM_004013.2| Homo sapiens dystrophin (DMD),
transcript variant Dp140, mRNA
Length=7410
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3664 GACATCTGCCAAAG 3677
> gi|238018057|ref|NM_004021.2| Homo sapiens dystrophin (DMD),
transcript variant Dp140b, mRNA
Length=7378
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3664 GACATCTGCCAAAG 3677
> gi|238018058|ref|NM_004022.2| Homo sapiens dystrophin (DMD),
transcript variant D140ab, mRNA
Length=7339
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3664 GACATCTGCCAAAG 3677
> gi|291490676|ref|NM_004020.3| Homo sapiens dystrophin (DMD),
transcript variant Dp140c, mRNA
Length=7080
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3664 GACATCTGCCAAAG 3677
> gi|238018059|ref|NM_004023.2| Homo sapiens dystrophin (DMD),
transcript variant Dp140bc, mRNA
Length=7048
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3664 GACATCTGCCAAAG 3677
> gi|238018049|ref|NM_004012.3| Homo sapiens dystrophin (DMD),
transcript variant Dp260-2, mRNA
Length=9914
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 6168 GACATCTGCCAAAG 6181
> gi|238018048|ref|NM_004011.3| Homo sapiens dystrophin (DMD),
transcript variant Dp260-1, mRNA
Length=9771
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 6025 GACATCTGCCAAAG 6038
> gi|238018047|ref|NM_004010.3| Homo sapiens dystrophin (DMD),
transcript variant Dp427p2, mRNA
Length=14083
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10337 GACATCTGCCAAAG 10350
> gi|238018046|ref|NM_004009.3| Homo sapiens dystrophin (DMD),
transcript variant Dp427p1, mRNA
Length=14000
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10254 GACATCTGCCAAAG 10267
> gi|1034673706|ref|XM_006724470.3| PREDICTED: Homo sapiens dystrophin
(DMD), transcript variant X3, mRNA
Length=13875
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10200 GACATCTGCCAAAG 10213
> gi|238018044|ref|NM_004006.2| Homo sapiens dystrophin (DMD),
transcript variant Dp427m, mRNA
Length=13993
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10247 GACATCTGCCAAAG 10260
> gi|238018043|ref|NM_000109.3| Homo sapiens dystrophin (DMD),
transcript variant Dp427c, mRNA
Length=14069
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10323 GACATCTGCCAAAG 10336
> gi|1034673715|ref|XM_017029331.1| PREDICTED: Homo sapiens dystrophin
(DMD), transcript variant X13, mRNA
Length=8499
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 4776 GACATCTGCCAAAG 4789
> gi|768032049|ref|XM_006724468.2| PREDICTED: Homo sapiens dystrophin
(DMD), transcript variant X1, mRNA
Length=13923
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10200 GACATCTGCCAAAG 10213
> gi|1034673707|ref|XM_017029328.1| PREDICTED: Homo sapiens dystrophin
(DMD), transcript variant X4, mRNA
Length=13916
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10200 GACATCTGCCAAAG 10213
> gi|768032072|ref|XM_006724475.2| PREDICTED: Homo sapiens dystrophin
(DMD), transcript variant X8, mRNA
Length=13625
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10200 GACATCTGCCAAAG 10213
> gi|768032064|ref|XM_006724473.2| PREDICTED: Homo sapiens dystrophin
(DMD), transcript variant X6, mRNA
Length=13785
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10062 GACATCTGCCAAAG 10075
> gi|768032058|ref|XM_011545467.1| PREDICTED: Homo sapiens dystrophin
(DMD), transcript variant X5, mRNA
Length=13800
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10077 GACATCTGCCAAAG 10090
> gi|1034673705|ref|XM_006724469.3| PREDICTED: Homo sapiens dystrophin
(DMD), transcript variant X2, mRNA
Length=13897
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 10174 GACATCTGCCAAAG 10187
> gi|208973263|ref|NM_004782.3| Homo sapiens synaptosome associated
protein 29kDa (SNAP29), mRNA
Length=4277
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 GGGACATCTGCCAA 17
||||||||||||||
Sbjct 1507 GGGACATCTGCCAA 1494
> gi|768017363|ref|XM_011528865.1| PREDICTED: Homo sapiens phospholipase
C gamma 1 (PLCG1), transcript variant X2, mRNA
Length=5193
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3281 GACATCTGCCAAAG 3294
> gi|33598945|ref|NM_182811.1| Homo sapiens phospholipase C gamma
1 (PLCG1), transcript variant 2, mRNA
Length=5202
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3414 GACATCTGCCAAAG 3427
> gi|33598947|ref|NM_002660.2| Homo sapiens phospholipase C gamma
1 (PLCG1), transcript variant 1, mRNA
Length=5205
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3414 GACATCTGCCAAAG 3427
> gi|1034625244|ref|XR_001754296.1| PREDICTED: Homo sapiens phospholipase
C gamma 1 (PLCG1), transcript variant X6, misc_RNA
Length=5157
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3365 GACATCTGCCAAAG 3378
> gi|1034625243|ref|XR_001754295.1| PREDICTED: Homo sapiens phospholipase
C gamma 1 (PLCG1), transcript variant X5, misc_RNA
Length=5160
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3365 GACATCTGCCAAAG 3378
> gi|1034625242|ref|XR_001754294.1| PREDICTED: Homo sapiens phospholipase
C gamma 1 (PLCG1), transcript variant X4, misc_RNA
Length=5109
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3317 GACATCTGCCAAAG 3330
> gi|1034625241|ref|XR_001754293.1| PREDICTED: Homo sapiens phospholipase
C gamma 1 (PLCG1), transcript variant X3, misc_RNA
Length=5112
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3317 GACATCTGCCAAAG 3330
> gi|768017359|ref|XM_005260438.2| PREDICTED: Homo sapiens phospholipase
C gamma 1 (PLCG1), transcript variant X1, mRNA
Length=5328
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 3416 GACATCTGCCAAAG 3429
> gi|1034626284|ref|XR_937274.2| PREDICTED: Homo sapiens uncharacterized
LOC105372535 (LOC105372535), transcript variant X2,
ncRNA
Length=1298
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 1052 GGACATCTGCCAAA 1039
> gi|330688442|ref|NM_001206491.1| Homo sapiens mitochondrial antiviral
signaling protein (MAVS), transcript variant 3, mRNA
Length=11596
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 2429 GACATCTGCCAAAG 2416
> gi|325053646|ref|NR_037921.1| Homo sapiens mitochondrial antiviral
signaling protein (MAVS), transcript variant 2, non-coding
RNA
Length=11598
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 2431 GACATCTGCCAAAG 2418
> gi|325053645|ref|NM_020746.4| Homo sapiens mitochondrial antiviral
signaling protein (MAVS), transcript variant 1, mRNA
Length=11771
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 GACATCTGCCAAAG 19
||||||||||||||
Sbjct 2604 GACATCTGCCAAAG 2591
> gi|1034672736|ref|XR_001746759.1| PREDICTED: Homo sapiens uncharacterized
LOC107987083 (LOC107987083), transcript variant
X1, ncRNA
Length=8449
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 TGGGACATCTGCCAAAGT 20
||||| ||||||||||||
Sbjct 6368 TGGGAAATCTGCCAAAGT 6385
> gi|608788356|ref|NM_173832.5| Homo sapiens ZFP41 zinc finger
protein (ZFP41), transcript variant 1, mRNA
Length=4813
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TGGGACATCTGCCA 16
||||||||||||||
Sbjct 4510 TGGGACATCTGCCA 4497
> gi|187960061|ref|NM_001003841.2| Homo sapiens solute carrier
family 6 member 19 (SLC6A19), mRNA
Length=5183
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CTTGGGACATCTGC 14
||||||||||||||
Sbjct 3599 CTTGGGACATCTGC 3612
> gi|1034642846|ref|XR_001741796.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X1, ncRNA
Length=4507
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 TTGGGACATCTGCC 15
||||||||||||||
Sbjct 849 TTGGGACATCTGCC 862
> gi|1034642847|ref|XR_001741797.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X2, ncRNA
Length=4458
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 TTGGGACATCTGCC 15
||||||||||||||
Sbjct 800 TTGGGACATCTGCC 813
> gi|1034642848|ref|XR_001741798.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X3, ncRNA
Length=4507
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 TTGGGACATCTGCC 15
||||||||||||||
Sbjct 852 TTGGGACATCTGCC 865
> gi|1034642850|ref|XR_001741800.1| PREDICTED: Homo sapiens uncharacterized
LOC107986306 (LOC107986306), transcript variant
X5, ncRNA
Length=4364
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 TTGGGACATCTGCC 15
||||||||||||||
Sbjct 852 TTGGGACATCTGCC 865
> gi|605052064|ref|NR_111932.1| Homo sapiens kinesin family member
5C (KIF5C), transcript variant 2, non-coding RNA
Length=6204
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 ACATCTGCCAAAGT 20
||||||||||||||
Sbjct 1144 ACATCTGCCAAAGT 1131
> gi|1034613851|ref|XM_011511157.2| PREDICTED: Homo sapiens kinesin
family member 5C (KIF5C), transcript variant X2, mRNA
Length=5508
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 ACATCTGCCAAAGT 20
||||||||||||||
Sbjct 1203 ACATCTGCCAAAGT 1190
> gi|1034613849|ref|XM_017004062.1| PREDICTED: Homo sapiens kinesin
family member 5C (KIF5C), transcript variant X1, mRNA
Length=4148
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 ACATCTGCCAAAGT 20
||||||||||||||
Sbjct 2113 ACATCTGCCAAAGT 2100
> gi|352962138|ref|NM_004522.2| Homo sapiens kinesin family member
5C (KIF5C), transcript variant 1, mRNA
Length=6958
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 ACATCTGCCAAAGT 20
||||||||||||||
Sbjct 2122 ACATCTGCCAAAGT 2109
> gi|1034561379|ref|XM_017002185.1| PREDICTED: Homo sapiens synaptonemal
complex protein 1 (SYCP1), transcript variant X5,
mRNA
Length=2751
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 1988 GGACATCTGCCAAA 2001
> gi|1034561382|ref|XM_011542038.2| PREDICTED: Homo sapiens synaptonemal
complex protein 1 (SYCP1), transcript variant X7,
mRNA
Length=2716
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 1953 GGACATCTGCCAAA 1966
> gi|578799669|ref|XM_006710859.1| PREDICTED: Homo sapiens synaptonemal
complex protein 1 (SYCP1), transcript variant X1, mRNA
Length=3433
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 2670 GGACATCTGCCAAA 2683
> gi|530363231|ref|XM_005271156.1| PREDICTED: Homo sapiens synaptonemal
complex protein 1 (SYCP1), transcript variant X4, mRNA
Length=3320
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 2557 GGACATCTGCCAAA 2570
> gi|543173119|ref|NM_003176.3| Homo sapiens synaptonemal complex
protein 1 (SYCP1), transcript variant 1, mRNA
Length=3529
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 2759 GGACATCTGCCAAA 2772
> gi|543173174|ref|NR_104211.1| Homo sapiens synaptonemal complex
protein 1 (SYCP1), transcript variant 4, non-coding RNA
Length=3632
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 2759 GGACATCTGCCAAA 2772
> gi|543173130|ref|NM_001282542.1| Homo sapiens synaptonemal complex
protein 1 (SYCP1), transcript variant 3, mRNA
Length=3457
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 2687 GGACATCTGCCAAA 2700
> gi|543173126|ref|NM_001282541.1| Homo sapiens synaptonemal complex
protein 1 (SYCP1), transcript variant 2, mRNA
Length=3532
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 2762 GGACATCTGCCAAA 2775
> gi|1034561378|ref|XM_005271155.3| PREDICTED: Homo sapiens synaptonemal
complex protein 1 (SYCP1), transcript variant X3,
mRNA
Length=3846
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 3083 GGACATCTGCCAAA 3096
> gi|1034561376|ref|XM_017002184.1| PREDICTED: Homo sapiens synaptonemal
complex protein 1 (SYCP1), transcript variant X2,
mRNA
Length=3325
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GGACATCTGCCAAA 18
||||||||||||||
Sbjct 2562 GGACATCTGCCAAA 2575
> gi|426214079|ref|NM_024901.4| Homo sapiens DENN domain containing
2D (DENND2D), transcript variant 1, mRNA
Length=3296
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TGGGACATCTGCCA 16
||||||||||||||
Sbjct 2898 TGGGACATCTGCCA 2885
> gi|426214084|ref|NM_001271833.1| Homo sapiens DENN domain containing
2D (DENND2D), transcript variant 2, mRNA
Length=3228
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TGGGACATCTGCCA 16
||||||||||||||
Sbjct 2830 TGGGACATCTGCCA 2817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2337180340
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2