BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= CTGAGTCCAAATAGCCCAAGG (evalue = 10)
Length=21
Score E
Sequences producing significant alignments: (Bits) Value
gi|589811556|ref|NM_001290230.1| Homo sapiens cyclin-dependent ... 42.1 6e-04
gi|589811555|ref|NM_052827.3| Homo sapiens cyclin-dependent kin... 42.1 6e-04
gi|589811554|ref|NM_001798.4| Homo sapiens cyclin-dependent kin... 42.1 6e-04
gi|767972771|ref|XM_011537732.1| PREDICTED: Homo sapiens cyclin... 42.1 6e-04
gi|1034640480|ref|XM_017008382.1| PREDICTED: Homo sapiens BMP2 ... 30.2 2.3
gi|1034640478|ref|XM_017008381.1| PREDICTED: Homo sapiens BMP2 ... 30.2 2.3
gi|767932289|ref|XM_011532102.1| PREDICTED: Homo sapiens BMP2 i... 30.2 2.3
gi|530377940|ref|XM_005263117.1| PREDICTED: Homo sapiens BMP2 i... 30.2 2.3
gi|38787903|ref|NM_017593.3| Homo sapiens BMP2 inducible kinase... 30.2 2.3
gi|38787934|ref|NM_198892.1| Homo sapiens BMP2 inducible kinase... 30.2 2.3
gi|77993294|ref|NR_002588.1| Homo sapiens small nucleolar RNA, ... 30.2 2.3
gi|223890220|ref|NM_025040.3| Homo sapiens zinc finger protein ... 30.2 2.3
gi|1034685305|ref|XM_016999606.1| PREDICTED: Homo sapiens leuko... 28.2 9.2
gi|1034685303|ref|XM_016999605.1| PREDICTED: Homo sapiens leuko... 28.2 9.2
gi|1034685302|ref|XR_001733748.1| PREDICTED: Homo sapiens leuko... 28.2 9.2
gi|1034685300|ref|XM_016999604.1| PREDICTED: Homo sapiens leuko... 28.2 9.2
gi|1034685298|ref|XR_001733746.1| PREDICTED: Homo sapiens leuko... 28.2 9.2
gi|1034685299|ref|XR_001733747.1| PREDICTED: Homo sapiens leuko... 28.2 9.2
gi|1034681520|ref|XR_913270.2| PREDICTED: Homo sapiens uncharac... 28.2 9.2
gi|387849243|ref|NM_003123.4| Homo sapiens sialophorin (SPN), t... 28.2 9.2
gi|387849240|ref|NM_001030288.2| Homo sapiens sialophorin (SPN)... 28.2 9.2
gi|530404006|ref|XM_005267771.1| PREDICTED: Homo sapiens transm... 28.2 9.2
gi|578825905|ref|XM_006720178.1| PREDICTED: Homo sapiens transm... 28.2 9.2
gi|578825901|ref|XM_006720176.1| PREDICTED: Homo sapiens transm... 28.2 9.2
gi|767980768|ref|XM_011536852.1| PREDICTED: Homo sapiens transm... 28.2 9.2
gi|767980770|ref|XM_011536853.1| PREDICTED: Homo sapiens transm... 28.2 9.2
gi|93277079|ref|NM_017799.3| Homo sapiens transmembrane protein... 28.2 9.2
gi|530404005|ref|XR_245695.1| PREDICTED: Homo sapiens transmemb... 28.2 9.2
gi|1034587338|ref|XR_001750387.1| PREDICTED: Homo sapiens trans... 28.2 9.2
gi|1034587334|ref|XR_001750382.1| PREDICTED: Homo sapiens trans... 28.2 9.2
gi|1034587336|ref|XR_001750385.1| PREDICTED: Homo sapiens trans... 28.2 9.2
gi|1034587337|ref|XR_001750386.1| PREDICTED: Homo sapiens trans... 28.2 9.2
gi|1034577013|ref|XR_950274.2| PREDICTED: Homo sapiens uncharac... 28.2 9.2
gi|1034670716|ref|XR_001746354.1| PREDICTED: Homo sapiens REX4 ... 28.2 9.2
gi|525345308|ref|NM_020385.3| Homo sapiens REX4 homolog, 3'-5' ... 28.2 9.2
gi|525345333|ref|NM_001279350.1| Homo sapiens REX4 homolog, 3'-... 28.2 9.2
gi|525345318|ref|NM_001279349.1| Homo sapiens REX4 homolog, 3'-... 28.2 9.2
gi|525345445|ref|NR_103996.1| Homo sapiens REX4 homolog, 3'-5' ... 28.2 9.2
gi|525345444|ref|NR_103995.1| Homo sapiens REX4 homolog, 3'-5' ... 28.2 9.2
gi|525345343|ref|NM_001279351.1| Homo sapiens REX4 homolog, 3'-... 28.2 9.2
gi|1034687096|ref|XR_919010.2| PREDICTED: Homo sapiens uncharac... 28.2 9.2
gi|1034697888|ref|XR_001759204.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034677235|ref|XR_001756491.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034605355|ref|XR_001753448.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034604535|ref|XM_011525728.2| PREDICTED: Homo sapiens A kin... 28.2 9.2
gi|1034598106|ref|XM_011523638.2| PREDICTED: Homo sapiens cytoc... 28.2 9.2
gi|974987432|ref|NM_002423.4| Homo sapiens matrix metallopeptid... 28.2 9.2
gi|641451080|ref|NR_120529.1| Homo sapiens uncharacterized LOC1... 28.2 9.2
gi|1034663343|ref|XR_001746115.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
> gi|589811556|ref|NM_001290230.1| Homo sapiens cyclin-dependent
kinase 2 (CDK2), transcript variant 3, mRNA
Length=2121
Score = 42.1 bits (21), Expect = 6e-04
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAGCCCAAGG 21
|||||||||||||||||||||
Sbjct 1044 CTGAGTCCAAATAGCCCAAGG 1024
> gi|589811555|ref|NM_052827.3| Homo sapiens cyclin-dependent kinase
2 (CDK2), transcript variant 2, mRNA
Length=2199
Score = 42.1 bits (21), Expect = 6e-04
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAGCCCAAGG 21
|||||||||||||||||||||
Sbjct 1122 CTGAGTCCAAATAGCCCAAGG 1102
> gi|589811554|ref|NM_001798.4| Homo sapiens cyclin-dependent kinase
2 (CDK2), transcript variant 1, mRNA
Length=2301
Score = 42.1 bits (21), Expect = 6e-04
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAGCCCAAGG 21
|||||||||||||||||||||
Sbjct 1224 CTGAGTCCAAATAGCCCAAGG 1204
> gi|767972771|ref|XM_011537732.1| PREDICTED: Homo sapiens cyclin-dependent
kinase 2 (CDK2), transcript variant X1, mRNA
Length=2445
Score = 42.1 bits (21), Expect = 6e-04
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAGCCCAAGG 21
|||||||||||||||||||||
Sbjct 1368 CTGAGTCCAAATAGCCCAAGG 1348
> gi|1034640480|ref|XM_017008382.1| PREDICTED: Homo sapiens BMP2
inducible kinase (BMP2K), transcript variant X3, mRNA
Length=7439
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 4 AGTCCAAATAGCCCA 18
|||||||||||||||
Sbjct 43 AGTCCAAATAGCCCA 29
> gi|1034640478|ref|XM_017008381.1| PREDICTED: Homo sapiens BMP2
inducible kinase (BMP2K), transcript variant X2, mRNA
Length=7736
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 4 AGTCCAAATAGCCCA 18
|||||||||||||||
Sbjct 258 AGTCCAAATAGCCCA 244
> gi|767932289|ref|XM_011532102.1| PREDICTED: Homo sapiens BMP2
inducible kinase (BMP2K), transcript variant X4, mRNA
Length=2442
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 4 AGTCCAAATAGCCCA 18
|||||||||||||||
Sbjct 481 AGTCCAAATAGCCCA 467
> gi|530377940|ref|XM_005263117.1| PREDICTED: Homo sapiens BMP2
inducible kinase (BMP2K), transcript variant X1, mRNA
Length=7848
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 4 AGTCCAAATAGCCCA 18
|||||||||||||||
Sbjct 481 AGTCCAAATAGCCCA 467
> gi|38787903|ref|NM_017593.3| Homo sapiens BMP2 inducible kinase
(BMP2K), transcript variant 2, mRNA
Length=2681
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 4 AGTCCAAATAGCCCA 18
|||||||||||||||
Sbjct 506 AGTCCAAATAGCCCA 492
> gi|38787934|ref|NM_198892.1| Homo sapiens BMP2 inducible kinase
(BMP2K), transcript variant 1, mRNA
Length=3859
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 4 AGTCCAAATAGCCCA 18
|||||||||||||||
Sbjct 506 AGTCCAAATAGCCCA 492
> gi|77993294|ref|NR_002588.1| Homo sapiens small nucleolar RNA,
H/ACA box 4 (SNORA4), small nucleolar RNA
Length=137
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 6 TCCAAATAGCCCAAG 20
|||||||||||||||
Sbjct 65 TCCAAATAGCCCAAG 51
> gi|223890220|ref|NM_025040.3| Homo sapiens zinc finger protein
614 (ZNF614), mRNA
Length=4676
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 6 TCCAAATAGCCCAAG 20
|||||||||||||||
Sbjct 3323 TCCAAATAGCCCAAG 3337
> gi|1034685305|ref|XM_016999606.1| PREDICTED: Homo sapiens leukosialin
(LOC105369247), transcript variant X6, mRNA
Length=9412
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 TGAGTCCAAATAGC 15
||||||||||||||
Sbjct 3568 TGAGTCCAAATAGC 3555
> gi|1034685303|ref|XM_016999605.1| PREDICTED: Homo sapiens leukosialin
(LOC105369247), transcript variant X5, mRNA
Length=9415
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 TGAGTCCAAATAGC 15
||||||||||||||
Sbjct 3568 TGAGTCCAAATAGC 3555
> gi|1034685302|ref|XR_001733748.1| PREDICTED: Homo sapiens leukosialin
(LOC105369247), transcript variant X4, misc_RNA
Length=9475
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 TGAGTCCAAATAGC 15
||||||||||||||
Sbjct 3631 TGAGTCCAAATAGC 3618
> gi|1034685300|ref|XM_016999604.1| PREDICTED: Homo sapiens leukosialin
(LOC105369247), transcript variant X3, mRNA
Length=7470
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 TGAGTCCAAATAGC 15
||||||||||||||
Sbjct 3805 TGAGTCCAAATAGC 3792
> gi|1034685298|ref|XR_001733746.1| PREDICTED: Homo sapiens leukosialin
(LOC105369247), transcript variant X1, misc_RNA
Length=9649
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 TGAGTCCAAATAGC 15
||||||||||||||
Sbjct 3805 TGAGTCCAAATAGC 3792
> gi|1034685299|ref|XR_001733747.1| PREDICTED: Homo sapiens leukosialin
(LOC105369247), transcript variant X2, misc_RNA
Length=9652
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 TGAGTCCAAATAGC 15
||||||||||||||
Sbjct 3805 TGAGTCCAAATAGC 3792
> gi|1034681520|ref|XR_913270.2| PREDICTED: Homo sapiens uncharacterized
LOC105369371 (LOC105369371), ncRNA
Length=3465
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 CAAATAGCCCAAGG 21
||||||||||||||
Sbjct 1662 CAAATAGCCCAAGG 1649
> gi|387849243|ref|NM_003123.4| Homo sapiens sialophorin (SPN),
transcript variant 2, mRNA
Length=6911
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 TGAGTCCAAATAGC 15
||||||||||||||
Sbjct 3598 TGAGTCCAAATAGC 3585
> gi|387849240|ref|NM_001030288.2| Homo sapiens sialophorin (SPN),
transcript variant 1, mRNA
Length=6944
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 TGAGTCCAAATAGC 15
||||||||||||||
Sbjct 3631 TGAGTCCAAATAGC 3618
> gi|530404006|ref|XM_005267771.1| PREDICTED: Homo sapiens transmembrane
protein 260 (TMEM260), transcript variant X12, mRNA
Length=3835
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAG 14
||||||||||||||
Sbjct 2521 CTGAGTCCAAATAG 2508
> gi|578825905|ref|XM_006720178.1| PREDICTED: Homo sapiens transmembrane
protein 260 (TMEM260), transcript variant X13, mRNA
Length=3938
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAG 14
||||||||||||||
Sbjct 2624 CTGAGTCCAAATAG 2611
> gi|578825901|ref|XM_006720176.1| PREDICTED: Homo sapiens transmembrane
protein 260 (TMEM260), transcript variant X7, mRNA
Length=4053
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAG 14
||||||||||||||
Sbjct 2739 CTGAGTCCAAATAG 2726
> gi|767980768|ref|XM_011536852.1| PREDICTED: Homo sapiens transmembrane
protein 260 (TMEM260), transcript variant X4, mRNA
Length=4256
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAG 14
||||||||||||||
Sbjct 2942 CTGAGTCCAAATAG 2929
> gi|767980770|ref|XM_011536853.1| PREDICTED: Homo sapiens transmembrane
protein 260 (TMEM260), transcript variant X5, mRNA
Length=4434
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAG 14
||||||||||||||
Sbjct 3120 CTGAGTCCAAATAG 3107
> gi|93277079|ref|NM_017799.3| Homo sapiens transmembrane protein
260 (TMEM260), mRNA
Length=4278
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAG 14
||||||||||||||
Sbjct 2950 CTGAGTCCAAATAG 2937
> gi|530404005|ref|XR_245695.1| PREDICTED: Homo sapiens transmembrane
protein 260 (TMEM260), transcript variant X10, misc_RNA
Length=4094
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAG 14
||||||||||||||
Sbjct 2780 CTGAGTCCAAATAG 2767
> gi|1034587338|ref|XR_001750387.1| PREDICTED: Homo sapiens transmembrane
protein 260 (TMEM260), transcript variant X11, misc_RNA
Length=4249
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAG 14
||||||||||||||
Sbjct 2935 CTGAGTCCAAATAG 2922
> gi|1034587334|ref|XR_001750382.1| PREDICTED: Homo sapiens transmembrane
protein 260 (TMEM260), transcript variant X3, misc_RNA
Length=4421
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAG 14
||||||||||||||
Sbjct 3107 CTGAGTCCAAATAG 3094
> gi|1034587336|ref|XR_001750385.1| PREDICTED: Homo sapiens transmembrane
protein 260 (TMEM260), transcript variant X8, misc_RNA
Length=4360
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAG 14
||||||||||||||
Sbjct 3046 CTGAGTCCAAATAG 3033
> gi|1034587337|ref|XR_001750386.1| PREDICTED: Homo sapiens transmembrane
protein 260 (TMEM260), transcript variant X9, misc_RNA
Length=4586
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CTGAGTCCAAATAG 14
||||||||||||||
Sbjct 3272 CTGAGTCCAAATAG 3259
> gi|1034577013|ref|XR_950274.2| PREDICTED: Homo sapiens uncharacterized
LOC105369371 (LOC105369371), ncRNA
Length=3465
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 CAAATAGCCCAAGG 21
||||||||||||||
Sbjct 1662 CAAATAGCCCAAGG 1649
> gi|1034670716|ref|XR_001746354.1| PREDICTED: Homo sapiens REX4
homolog, 3'-5' exonuclease (REXO4), transcript variant X1,
misc_RNA
Length=2132
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 CAAATAGCCCAAGG 21
||||||||||||||
Sbjct 1925 CAAATAGCCCAAGG 1912
> gi|525345308|ref|NM_020385.3| Homo sapiens REX4 homolog, 3'-5'
exonuclease (REXO4), transcript variant 1, mRNA
Length=2433
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 CAAATAGCCCAAGG 21
||||||||||||||
Sbjct 2205 CAAATAGCCCAAGG 2192
> gi|525345333|ref|NM_001279350.1| Homo sapiens REX4 homolog, 3'-5'
exonuclease (REXO4), transcript variant 3, mRNA
Length=2255
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 CAAATAGCCCAAGG 21
||||||||||||||
Sbjct 2027 CAAATAGCCCAAGG 2014
> gi|525345318|ref|NM_001279349.1| Homo sapiens REX4 homolog, 3'-5'
exonuclease (REXO4), transcript variant 2, mRNA
Length=1917
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 CAAATAGCCCAAGG 21
||||||||||||||
Sbjct 1689 CAAATAGCCCAAGG 1676
> gi|525345445|ref|NR_103996.1| Homo sapiens REX4 homolog, 3'-5'
exonuclease (REXO4), transcript variant 6, non-coding RNA
Length=2086
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 CAAATAGCCCAAGG 21
||||||||||||||
Sbjct 1858 CAAATAGCCCAAGG 1845
> gi|525345444|ref|NR_103995.1| Homo sapiens REX4 homolog, 3'-5'
exonuclease (REXO4), transcript variant 5, non-coding RNA
Length=1892
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 CAAATAGCCCAAGG 21
||||||||||||||
Sbjct 1664 CAAATAGCCCAAGG 1651
> gi|525345343|ref|NM_001279351.1| Homo sapiens REX4 homolog, 3'-5'
exonuclease (REXO4), transcript variant 4, mRNA
Length=2116
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 CAAATAGCCCAAGG 21
||||||||||||||
Sbjct 1888 CAAATAGCCCAAGG 1875
> gi|1034687096|ref|XR_919010.2| PREDICTED: Homo sapiens uncharacterized
LOC105372115 (LOC105372115), ncRNA
Length=4895
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 7 CCAAATAGCCCAAG 20
||||||||||||||
Sbjct 3950 CCAAATAGCCCAAG 3963
> gi|1034697888|ref|XR_001759204.1| PREDICTED: Homo sapiens uncharacterized
LOC107986981 (LOC107986981), ncRNA
Length=5948
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GTCCAAATAGCCCA 18
||||||||||||||
Sbjct 1651 GTCCAAATAGCCCA 1664
> gi|1034677235|ref|XR_001756491.1| PREDICTED: Homo sapiens uncharacterized
LOC105372115 (LOC105372115), ncRNA
Length=4893
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 7 CCAAATAGCCCAAG 20
||||||||||||||
Sbjct 3948 CCAAATAGCCCAAG 3961
> gi|1034605355|ref|XR_001753448.1| PREDICTED: Homo sapiens uncharacterized
LOC105372115 (LOC105372115), ncRNA
Length=4893
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 7 CCAAATAGCCCAAG 20
||||||||||||||
Sbjct 3948 CCAAATAGCCCAAG 3961
> gi|1034604535|ref|XM_011525728.2| PREDICTED: Homo sapiens A kinase
(PRKA) anchor inhibitor 1 (AKAIN1), transcript variant
X1, mRNA
Length=4627
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 8 CAAATAGCCCAAGG 21
||||||||||||||
Sbjct 185 CAAATAGCCCAAGG 198
> gi|1034598106|ref|XM_011523638.2| PREDICTED: Homo sapiens cytochrome
b5 domain containing 1 (CYB5D1), transcript variant
X1, mRNA
Length=1705
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 TCCAAATAGCCCAA 19
||||||||||||||
Sbjct 1008 TCCAAATAGCCCAA 1021
> gi|974987432|ref|NM_002423.4| Homo sapiens matrix metallopeptidase
7 (MMP7), mRNA
Length=1153
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 TCCAAATAGCCCAA 19
||||||||||||||
Sbjct 347 TCCAAATAGCCCAA 360
> gi|641451080|ref|NR_120529.1| Homo sapiens uncharacterized LOC101928443
(LOC101928443), transcript variant 1, long non-coding
RNA
Length=1768
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 8 CAAATAGCCCAAGG 21
||||||||||||||
Sbjct 559 CAAATAGCCCAAGG 572
> gi|1034663343|ref|XR_001746115.1| PREDICTED: Homo sapiens uncharacterized
LOC107986981 (LOC107986981), ncRNA
Length=5948
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GTCCAAATAGCCCA 18
||||||||||||||
Sbjct 1651 GTCCAAATAGCCCA 1664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2921475425
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2