BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= CGCCTGCCATGTTGATCTTCG (evalue = 10)
Length=21
Score E
Sequences producing significant alignments: (Bits) Value
gi|356582356|ref|NM_031966.3| Homo sapiens cyclin B1 (CCNB1), mRNA 42.1 6e-04
gi|1034599411|ref|XM_011524692.2| PREDICTED: Homo sapiens gluta... 28.2 9.2
gi|514388101|ref|NM_001278553.1| Homo sapiens glutamate ionotro... 28.2 9.2
gi|514388103|ref|NM_000835.4| Homo sapiens glutamate ionotropic... 28.2 9.2
gi|514388121|ref|NR_103735.1| Homo sapiens glutamate ionotropic... 28.2 9.2
gi|1034599408|ref|XM_006721845.3| PREDICTED: Homo sapiens gluta... 28.2 9.2
gi|1034599407|ref|XM_011524688.2| PREDICTED: Homo sapiens gluta... 28.2 9.2
gi|1034599409|ref|XM_006721846.3| PREDICTED: Homo sapiens gluta... 28.2 9.2
gi|1034599406|ref|XM_011524687.2| PREDICTED: Homo sapiens gluta... 28.2 9.2
gi|1034599403|ref|XM_017024544.1| PREDICTED: Homo sapiens gluta... 28.2 9.2
gi|1034599405|ref|XM_011524686.2| PREDICTED: Homo sapiens gluta... 28.2 9.2
gi|1034599410|ref|XM_011524689.2| PREDICTED: Homo sapiens gluta... 28.2 9.2
gi|300934737|ref|NM_001193329.1| Homo sapiens chromosome 9 open... 28.2 9.2
gi|1034671671|ref|XM_017015233.1| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|1034671656|ref|XM_017015229.1| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|308387394|ref|NM_001193331.2| Homo sapiens chromosome 9 open... 28.2 9.2
gi|308387395|ref|NM_032823.5| Homo sapiens chromosome 9 open re... 28.2 9.2
gi|1034671681|ref|XM_011519134.2| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|767958556|ref|XM_011519130.1| PREDICTED: Homo sapiens chromo... 28.2 9.2
gi|767958554|ref|XM_011519129.1| PREDICTED: Homo sapiens chromo... 28.2 9.2
gi|767958551|ref|XR_929857.1| PREDICTED: Homo sapiens chromosom... 28.2 9.2
gi|767958549|ref|XM_011519127.1| PREDICTED: Homo sapiens chromo... 28.2 9.2
gi|1034671666|ref|XM_011519122.2| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|1034671670|ref|XM_011519123.2| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|767958539|ref|XR_929855.1| PREDICTED: Homo sapiens chromosom... 28.2 9.2
gi|1034671668|ref|XM_017015232.1| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|1034671667|ref|XR_929856.2| PREDICTED: Homo sapiens chromoso... 28.2 9.2
gi|767958535|ref|XR_929853.1| PREDICTED: Homo sapiens chromosom... 28.2 9.2
gi|767958536|ref|XR_929854.1| PREDICTED: Homo sapiens chromosom... 28.2 9.2
gi|1034671658|ref|XM_011519120.2| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|1034671663|ref|XM_005252284.2| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|1034671676|ref|XR_001746404.1| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|1034671675|ref|XR_001746403.1| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|1034671664|ref|XM_017015231.1| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|767958528|ref|XM_011519119.1| PREDICTED: Homo sapiens chromo... 28.2 9.2
gi|578817949|ref|XM_006717306.1| PREDICTED: Homo sapiens chromo... 28.2 9.2
gi|767958532|ref|XR_929852.1| PREDICTED: Homo sapiens chromosom... 28.2 9.2
gi|1034671661|ref|XR_001746402.1| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|1034671659|ref|XM_017015230.1| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|1034671662|ref|XM_011519121.2| PREDICTED: Homo sapiens chrom... 28.2 9.2
gi|1034671409|ref|XM_017015163.1| PREDICTED: Homo sapiens intra... 28.2 9.2
gi|1034671408|ref|XM_011518036.2| PREDICTED: Homo sapiens intra... 28.2 9.2
gi|1034659250|ref|XM_017013086.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659252|ref|XM_017013087.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|564730662|ref|NM_001287244.1| Homo sapiens RALY RNA binding ... 28.2 9.2
gi|1034659246|ref|XM_017013084.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659205|ref|XM_017013064.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659197|ref|XM_017013060.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659199|ref|XM_017013061.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|154240691|ref|NM_001100391.1| Homo sapiens RALY RNA binding ... 28.2 9.2
gi|1034659244|ref|XM_017013083.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659227|ref|XM_017013075.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659221|ref|XM_017013072.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659223|ref|XM_017013073.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659193|ref|XM_017013058.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659238|ref|XM_017013080.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659240|ref|XM_017013081.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659229|ref|XM_017013076.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659248|ref|XM_017013085.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|564730578|ref|NM_001287243.1| Homo sapiens RALY RNA binding ... 28.2 9.2
gi|154240739|ref|NM_173848.5| Homo sapiens RALY RNA binding pro... 28.2 9.2
gi|1034659215|ref|XM_017013069.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659237|ref|XM_011517462.2| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659211|ref|XM_017013067.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659217|ref|XM_017013070.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659235|ref|XM_017013079.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659213|ref|XM_017013068.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659195|ref|XM_017013059.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659201|ref|XM_017013062.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659242|ref|XM_017013082.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659209|ref|XM_017013066.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659233|ref|XM_017013078.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|154240737|ref|NM_001100393.1| Homo sapiens RALY RNA binding ... 28.2 9.2
gi|154240711|ref|NM_001100392.1| Homo sapiens RALY RNA binding ... 28.2 9.2
gi|1034659231|ref|XM_017013077.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659225|ref|XM_017013074.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659219|ref|XM_017013071.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659207|ref|XM_017013065.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034659203|ref|XM_017013063.1| PREDICTED: Homo sapiens RALY ... 28.2 9.2
gi|1034693753|ref|XR_001757108.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034693752|ref|XR_001757107.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034693750|ref|XR_001757105.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034689017|ref|XR_001743595.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034678865|ref|XM_016999768.1| PREDICTED: Homo sapiens prote... 28.2 9.2
gi|1034604166|ref|XM_011526047.2| PREDICTED: Homo sapiens ring ... 28.2 9.2
gi|1034601457|ref|XM_017025146.1| PREDICTED: Homo sapiens DBF4 ... 28.2 9.2
gi|1034601471|ref|XM_017025152.1| PREDICTED: Homo sapiens DBF4 ... 28.2 9.2
gi|1034601479|ref|XM_017025156.1| PREDICTED: Homo sapiens DBF4 ... 28.2 9.2
gi|1034601461|ref|XM_017025148.1| PREDICTED: Homo sapiens DBF4 ... 28.2 9.2
gi|1034601455|ref|XM_017025145.1| PREDICTED: Homo sapiens DBF4 ... 28.2 9.2
gi|1034601469|ref|XM_017025151.1| PREDICTED: Homo sapiens DBF4 ... 28.2 9.2
gi|1034601463|ref|XM_017025149.1| PREDICTED: Homo sapiens DBF4 ... 28.2 9.2
gi|1034601459|ref|XM_017025147.1| PREDICTED: Homo sapiens DBF4 ... 28.2 9.2
gi|1034646175|ref|XR_241790.4| PREDICTED: Homo sapiens pentatri... 28.2 9.2
gi|1034646181|ref|XR_001742270.1| PREDICTED: Homo sapiens penta... 28.2 9.2
gi|1034647474|ref|XR_001742679.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034647473|ref|XR_001742678.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034647471|ref|XR_001742676.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034619630|ref|XR_001739795.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1034565176|ref|XM_017003082.1| PREDICTED: Homo sapiens prote... 28.2 9.2
> gi|356582356|ref|NM_031966.3| Homo sapiens cyclin B1 (CCNB1),
mRNA
Length=2177
Score = 42.1 bits (21), Expect = 6e-04
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTGATCTTCG 21
|||||||||||||||||||||
Sbjct 323 CGCCTGCCATGTTGATCTTCG 303
> gi|1034599411|ref|XM_011524692.2| PREDICTED: Homo sapiens glutamate
ionotropic receptor NMDA type subunit 2C (GRIN2C), transcript
variant X8, mRNA
Length=3935
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 3885 CGCCTGCCATGTTG 3872
> gi|514388101|ref|NM_001278553.1| Homo sapiens glutamate ionotropic
receptor NMDA type subunit 2C (GRIN2C), transcript variant
2, mRNA
Length=3269
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 2862 CGCCTGCCATGTTG 2849
> gi|514388103|ref|NM_000835.4| Homo sapiens glutamate ionotropic
receptor NMDA type subunit 2C (GRIN2C), transcript variant
1, mRNA
Length=4292
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 2608 CGCCTGCCATGTTG 2595
> gi|514388121|ref|NR_103735.1| Homo sapiens glutamate ionotropic
receptor NMDA type subunit 2C (GRIN2C), transcript variant
3, non-coding RNA
Length=4288
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 2604 CGCCTGCCATGTTG 2591
> gi|1034599408|ref|XM_006721845.3| PREDICTED: Homo sapiens glutamate
ionotropic receptor NMDA type subunit 2C (GRIN2C), transcript
variant X5, mRNA
Length=5538
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 3874 CGCCTGCCATGTTG 3861
> gi|1034599407|ref|XM_011524688.2| PREDICTED: Homo sapiens glutamate
ionotropic receptor NMDA type subunit 2C (GRIN2C), transcript
variant X4, mRNA
Length=5563
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 3899 CGCCTGCCATGTTG 3886
> gi|1034599409|ref|XM_006721846.3| PREDICTED: Homo sapiens glutamate
ionotropic receptor NMDA type subunit 2C (GRIN2C), transcript
variant X6, mRNA
Length=5536
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 3872 CGCCTGCCATGTTG 3859
> gi|1034599406|ref|XM_011524687.2| PREDICTED: Homo sapiens glutamate
ionotropic receptor NMDA type subunit 2C (GRIN2C), transcript
variant X3, mRNA
Length=5603
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 3939 CGCCTGCCATGTTG 3926
> gi|1034599403|ref|XM_017024544.1| PREDICTED: Homo sapiens glutamate
ionotropic receptor NMDA type subunit 2C (GRIN2C), transcript
variant X1, mRNA
Length=5628
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 3964 CGCCTGCCATGTTG 3951
> gi|1034599405|ref|XM_011524686.2| PREDICTED: Homo sapiens glutamate
ionotropic receptor NMDA type subunit 2C (GRIN2C), transcript
variant X2, mRNA
Length=5627
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 3963 CGCCTGCCATGTTG 3950
> gi|1034599410|ref|XM_011524689.2| PREDICTED: Homo sapiens glutamate
ionotropic receptor NMDA type subunit 2C (GRIN2C), transcript
variant X7, mRNA
Length=4350
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 2686 CGCCTGCCATGTTG 2673
> gi|300934737|ref|NM_001193329.1| Homo sapiens chromosome 9 open
reading frame 3 (C9orf3), transcript variant 1, mRNA
Length=3145
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1022 GCCTGCCATGTTGA 1009
> gi|1034671671|ref|XM_017015233.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X19, mRNA
Length=3110
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1200 GCCTGCCATGTTGA 1187
> gi|1034671656|ref|XM_017015229.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X2, mRNA
Length=3123
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1213 GCCTGCCATGTTGA 1200
> gi|308387394|ref|NM_001193331.2| Homo sapiens chromosome 9 open
reading frame 3 (C9orf3), transcript variant 4, mRNA
Length=3851
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1105 GCCTGCCATGTTGA 1092
> gi|308387395|ref|NM_032823.5| Homo sapiens chromosome 9 open
reading frame 3 (C9orf3), transcript variant 2, mRNA
Length=2931
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1105 GCCTGCCATGTTGA 1092
> gi|1034671681|ref|XM_011519134.2| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X29, mRNA
Length=3014
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|767958556|ref|XM_011519130.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant X26,
mRNA
Length=2352
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|767958554|ref|XM_011519129.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant X22,
mRNA
Length=2737
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|767958551|ref|XR_929857.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant X20,
misc_RNA
Length=2134
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|767958549|ref|XM_011519127.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant X18,
mRNA
Length=2216
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671666|ref|XM_011519122.2| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X13, mRNA
Length=4790
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671670|ref|XM_011519123.2| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X17, mRNA
Length=2691
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|767958539|ref|XR_929855.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant X16,
misc_RNA
Length=3790
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671668|ref|XM_017015232.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X15, mRNA
Length=5234
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671667|ref|XR_929856.2| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant X14,
misc_RNA
Length=3387
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|767958535|ref|XR_929853.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant X9,
misc_RNA
Length=2800
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|767958536|ref|XR_929854.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant X10,
misc_RNA
Length=2892
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671658|ref|XM_011519120.2| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X3, mRNA
Length=2923
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671663|ref|XM_005252284.2| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X11, mRNA
Length=2766
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671676|ref|XR_001746404.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X24, misc_RNA
Length=2884
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671675|ref|XR_001746403.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X23, misc_RNA
Length=6846
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671664|ref|XM_017015231.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X12, mRNA
Length=6890
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|767958528|ref|XM_011519119.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant X1,
mRNA
Length=3080
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|578817949|ref|XM_006717306.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant X6,
mRNA
Length=3225
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|767958532|ref|XR_929852.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant X7,
misc_RNA
Length=3415
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671661|ref|XR_001746402.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X5, misc_RNA
Length=6625
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671659|ref|XM_017015230.1| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X4, mRNA
Length=7187
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671662|ref|XM_011519121.2| PREDICTED: Homo sapiens chromosome
9 open reading frame 3 (C9orf3), transcript variant
X8, mRNA
Length=3656
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 1170 GCCTGCCATGTTGA 1157
> gi|1034671409|ref|XM_017015163.1| PREDICTED: Homo sapiens intraflagellar
transport 74 (IFT74), transcript variant X3, mRNA
Length=4874
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 CCATGTTGATCTTC 20
||||||||||||||
Sbjct 4230 CCATGTTGATCTTC 4217
> gi|1034671408|ref|XM_011518036.2| PREDICTED: Homo sapiens intraflagellar
transport 74 (IFT74), transcript variant X2, mRNA
Length=5069
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 CCATGTTGATCTTC 20
||||||||||||||
Sbjct 4425 CCATGTTGATCTTC 4412
> gi|1034659250|ref|XM_017013086.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X30,
mRNA
Length=1729
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 150 CCTGCCATGTTGAT 137
> gi|1034659252|ref|XM_017013087.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X31,
mRNA
Length=1514
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 150 CCTGCCATGTTGAT 137
> gi|564730662|ref|NM_001287244.1| Homo sapiens RALY RNA binding
protein-like (RALYL), transcript variant 6, mRNA
Length=1700
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 150 CCTGCCATGTTGAT 137
> gi|1034659246|ref|XM_017013084.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X28,
mRNA
Length=2683
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 1179 CCTGCCATGTTGAT 1166
> gi|1034659205|ref|XM_017013064.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X7, mRNA
Length=2499
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 962 CCTGCCATGTTGAT 949
> gi|1034659197|ref|XM_017013060.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X3, mRNA
Length=4426
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 2889 CCTGCCATGTTGAT 2876
> gi|1034659199|ref|XM_017013061.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X4, mRNA
Length=3578
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 2041 CCTGCCATGTTGAT 2028
> gi|154240691|ref|NM_001100391.1| Homo sapiens RALY RNA binding
protein-like (RALYL), transcript variant 1, mRNA
Length=1995
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 445 CCTGCCATGTTGAT 432
> gi|1034659244|ref|XM_017013083.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X27,
mRNA
Length=1848
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 311 CCTGCCATGTTGAT 298
> gi|1034659227|ref|XM_017013075.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X18,
mRNA
Length=1926
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 595 CCTGCCATGTTGAT 582
> gi|1034659221|ref|XM_017013072.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X15,
mRNA
Length=2176
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 597 CCTGCCATGTTGAT 584
> gi|1034659223|ref|XM_017013073.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X16,
mRNA
Length=1961
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 597 CCTGCCATGTTGAT 584
> gi|1034659193|ref|XM_017013058.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X1, mRNA
Length=2148
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 644 CCTGCCATGTTGAT 631
> gi|1034659238|ref|XM_017013080.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X24,
mRNA
Length=1936
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 390 CCTGCCATGTTGAT 377
> gi|1034659240|ref|XM_017013081.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X25,
mRNA
Length=1721
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 390 CCTGCCATGTTGAT 377
> gi|1034659229|ref|XM_017013076.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X19,
mRNA
Length=1754
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 390 CCTGCCATGTTGAT 377
> gi|1034659248|ref|XM_017013085.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X29,
mRNA
Length=1730
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 193 CCTGCCATGTTGAT 180
> gi|564730578|ref|NM_001287243.1| Homo sapiens RALY RNA binding
protein-like (RALYL), transcript variant 5, mRNA
Length=2886
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 1369 CCTGCCATGTTGAT 1356
> gi|154240739|ref|NM_173848.5| Homo sapiens RALY RNA binding protein-like
(RALYL), transcript variant 3, mRNA
Length=2919
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 1369 CCTGCCATGTTGAT 1356
> gi|1034659215|ref|XM_017013069.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X12,
mRNA
Length=2299
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 795 CCTGCCATGTTGAT 782
> gi|1034659237|ref|XM_011517462.2| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X23,
mRNA
Length=3019
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 1473 CCTGCCATGTTGAT 1460
> gi|1034659211|ref|XM_017013067.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X10,
mRNA
Length=3051
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 1547 CCTGCCATGTTGAT 1534
> gi|1034659217|ref|XM_017013070.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X13,
mRNA
Length=2143
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 639 CCTGCCATGTTGAT 626
> gi|1034659235|ref|XM_017013079.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X22,
mRNA
Length=2003
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 639 CCTGCCATGTTGAT 626
> gi|1034659213|ref|XM_017013068.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X11,
mRNA
Length=2243
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 739 CCTGCCATGTTGAT 726
> gi|1034659195|ref|XM_017013059.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X2, mRNA
Length=2276
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 739 CCTGCCATGTTGAT 726
> gi|1034659201|ref|XM_017013062.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X5, mRNA
Length=2385
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 848 CCTGCCATGTTGAT 835
> gi|1034659242|ref|XM_017013082.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X26,
mRNA
Length=1987
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 656 CCTGCCATGTTGAT 643
> gi|1034659209|ref|XM_017013066.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X9, mRNA
Length=2160
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 656 CCTGCCATGTTGAT 643
> gi|1034659233|ref|XM_017013078.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X21,
mRNA
Length=2020
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 656 CCTGCCATGTTGAT 643
> gi|154240737|ref|NM_001100393.1| Homo sapiens RALY RNA binding
protein-like (RALYL), transcript variant 4, mRNA
Length=2206
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 656 CCTGCCATGTTGAT 643
> gi|154240711|ref|NM_001100392.1| Homo sapiens RALY RNA binding
protein-like (RALYL), transcript variant 2, mRNA
Length=2238
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 688 CCTGCCATGTTGAT 675
> gi|1034659231|ref|XM_017013077.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X20,
mRNA
Length=3004
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 1640 CCTGCCATGTTGAT 1627
> gi|1034659225|ref|XM_017013074.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X17,
mRNA
Length=2089
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 510 CCTGCCATGTTGAT 497
> gi|1034659219|ref|XM_017013071.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X14,
mRNA
Length=2014
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 510 CCTGCCATGTTGAT 497
> gi|1034659207|ref|XM_017013065.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X8, mRNA
Length=2047
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 510 CCTGCCATGTTGAT 497
> gi|1034659203|ref|XM_017013063.1| PREDICTED: Homo sapiens RALY
RNA binding protein-like (RALYL), transcript variant X6, mRNA
Length=2148
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 611 CCTGCCATGTTGAT 598
> gi|1034693753|ref|XR_001757108.1| PREDICTED: Homo sapiens uncharacterized
LOC107986417 (LOC107986417), transcript variant
X4, ncRNA
Length=10989
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 8216 GCCTGCCATGTTGA 8229
> gi|1034693752|ref|XR_001757107.1| PREDICTED: Homo sapiens uncharacterized
LOC107986417 (LOC107986417), transcript variant
X3, ncRNA
Length=11077
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 8304 GCCTGCCATGTTGA 8317
> gi|1034693750|ref|XR_001757105.1| PREDICTED: Homo sapiens uncharacterized
LOC107986417 (LOC107986417), transcript variant
X1, ncRNA
Length=11086
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 8313 GCCTGCCATGTTGA 8326
> gi|1034689017|ref|XR_001743595.1| PREDICTED: Homo sapiens uncharacterized
LOC105373760 (LOC105373760), transcript variant
X1, ncRNA
Length=1773
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 1021 CCTGCCATGTTGAT 1034
> gi|1034678865|ref|XM_016999768.1| PREDICTED: Homo sapiens protein
enabled homolog (LOC107985184), transcript variant X2,
mRNA
Length=2872
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 1338 CGCCTGCCATGTTG 1351
> gi|1034604166|ref|XM_011526047.2| PREDICTED: Homo sapiens ring
finger protein 125, E3 ubiquitin protein ligase (RNF125),
transcript variant X3, mRNA
Length=4019
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 2319 GCCTGCCATGTTGA 2332
> gi|1034601457|ref|XM_017025146.1| PREDICTED: Homo sapiens DBF4
zinc finger B (DBF4B), transcript variant X2, mRNA
Length=3492
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 CTGCCATGTTGATC 17
||||||||||||||
Sbjct 755 CTGCCATGTTGATC 768
> gi|1034601471|ref|XM_017025152.1| PREDICTED: Homo sapiens DBF4
zinc finger B (DBF4B), transcript variant X11, mRNA
Length=6223
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 CTGCCATGTTGATC 17
||||||||||||||
Sbjct 1920 CTGCCATGTTGATC 1933
> gi|1034601479|ref|XM_017025156.1| PREDICTED: Homo sapiens DBF4
zinc finger B (DBF4B), transcript variant X15, mRNA
Length=1195
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 CTGCCATGTTGATC 17
||||||||||||||
Sbjct 863 CTGCCATGTTGATC 876
> gi|1034601461|ref|XM_017025148.1| PREDICTED: Homo sapiens DBF4
zinc finger B (DBF4B), transcript variant X4, mRNA
Length=3483
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 CTGCCATGTTGATC 17
||||||||||||||
Sbjct 863 CTGCCATGTTGATC 876
> gi|1034601455|ref|XM_017025145.1| PREDICTED: Homo sapiens DBF4
zinc finger B (DBF4B), transcript variant X1, mRNA
Length=3600
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 CTGCCATGTTGATC 17
||||||||||||||
Sbjct 863 CTGCCATGTTGATC 876
> gi|1034601469|ref|XM_017025151.1| PREDICTED: Homo sapiens DBF4
zinc finger B (DBF4B), transcript variant X10, mRNA
Length=1769
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 CTGCCATGTTGATC 17
||||||||||||||
Sbjct 863 CTGCCATGTTGATC 876
> gi|1034601463|ref|XM_017025149.1| PREDICTED: Homo sapiens DBF4
zinc finger B (DBF4B), transcript variant X6, mRNA
Length=3654
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 CTGCCATGTTGATC 17
||||||||||||||
Sbjct 863 CTGCCATGTTGATC 876
> gi|1034601459|ref|XM_017025147.1| PREDICTED: Homo sapiens DBF4
zinc finger B (DBF4B), transcript variant X3, mRNA
Length=3591
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 CTGCCATGTTGATC 17
||||||||||||||
Sbjct 854 CTGCCATGTTGATC 867
> gi|1034646175|ref|XR_241790.4| PREDICTED: Homo sapiens pentatricopeptide
repeat domain 2 (PTCD2), transcript variant X1,
misc_RNA
Length=10365
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 4777 GCCTGCCATGTTGA 4790
> gi|1034646181|ref|XR_001742270.1| PREDICTED: Homo sapiens pentatricopeptide
repeat domain 2 (PTCD2), transcript variant X6,
misc_RNA
Length=10291
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 4703 GCCTGCCATGTTGA 4716
> gi|1034647474|ref|XR_001742679.1| PREDICTED: Homo sapiens uncharacterized
LOC107986417 (LOC107986417), transcript variant
X4, ncRNA
Length=10989
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 8216 GCCTGCCATGTTGA 8229
> gi|1034647473|ref|XR_001742678.1| PREDICTED: Homo sapiens uncharacterized
LOC107986417 (LOC107986417), transcript variant
X3, ncRNA
Length=11077
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 8304 GCCTGCCATGTTGA 8317
> gi|1034647471|ref|XR_001742676.1| PREDICTED: Homo sapiens uncharacterized
LOC107986417 (LOC107986417), transcript variant
X1, ncRNA
Length=11086
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 GCCTGCCATGTTGA 15
||||||||||||||
Sbjct 8313 GCCTGCCATGTTGA 8326
> gi|1034619630|ref|XR_001739795.1| PREDICTED: Homo sapiens uncharacterized
LOC105373760 (LOC105373760), transcript variant
X1, ncRNA
Length=1773
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 CCTGCCATGTTGAT 16
||||||||||||||
Sbjct 1021 CCTGCCATGTTGAT 1034
> gi|1034565176|ref|XM_017003082.1| PREDICTED: Homo sapiens protein
enabled homolog (LOC107985184), transcript variant X1,
mRNA
Length=3092
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CGCCTGCCATGTTG 14
||||||||||||||
Sbjct 1558 CGCCTGCCATGTTG 1571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2921475425
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2