BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= CCAGGAGAAGAAGAGACACGGATG (evalue = 10)
Length=24
Score E
Sequences producing significant alignments: (Bits) Value
gi|767919673|ref|XM_011511807.1| PREDICTED: Homo sapiens interl... 48.1 2e-05
gi|1034616487|ref|XR_923024.2| PREDICTED: Homo sapiens interleu... 48.1 2e-05
gi|1034616481|ref|XM_011511801.2| PREDICTED: Homo sapiens inter... 48.1 2e-05
gi|1034616485|ref|XM_011511804.2| PREDICTED: Homo sapiens inter... 48.1 2e-05
gi|1034616486|ref|XM_011511805.2| PREDICTED: Homo sapiens inter... 48.1 2e-05
gi|387527982|ref|NR_048564.1| Homo sapiens interleukin 1 recept... 48.1 2e-05
gi|1034616483|ref|XM_011511803.2| PREDICTED: Homo sapiens inter... 48.1 2e-05
gi|387527983|ref|NM_001261419.1| Homo sapiens interleukin 1 rec... 48.1 2e-05
gi|27894332|ref|NM_004633.3| Homo sapiens interleukin 1 recepto... 48.1 2e-05
gi|1034616488|ref|XM_017004889.1| PREDICTED: Homo sapiens inter... 48.1 2e-05
gi|1034616484|ref|XM_006712734.3| PREDICTED: Homo sapiens inter... 48.1 2e-05
gi|1034616482|ref|XM_006712736.3| PREDICTED: Homo sapiens inter... 48.1 2e-05
gi|953768341|ref|NM_000876.3| Homo sapiens insulin like growth ... 32.2 0.94
gi|140161535|ref|NM_015233.5| Homo sapiens microtubule associat... 32.2 0.94
gi|1034584181|ref|XM_011535022.2| PREDICTED: Homo sapiens micro... 32.2 0.94
gi|140161497|ref|NM_001033602.2| Homo sapiens microtubule assoc... 32.2 0.94
gi|1034584179|ref|XM_017020502.1| PREDICTED: Homo sapiens micro... 32.2 0.94
gi|1034584174|ref|XM_011535021.2| PREDICTED: Homo sapiens micro... 32.2 0.94
gi|1034584173|ref|XM_011535020.2| PREDICTED: Homo sapiens micro... 32.2 0.94
gi|1034584172|ref|XM_011535019.2| PREDICTED: Homo sapiens micro... 32.2 0.94
gi|1034681753|ref|XR_432747.3| PREDICTED: Homo sapiens uncharac... 30.2 3.7
gi|1034577175|ref|XR_428993.3| PREDICTED: Homo sapiens uncharac... 30.2 3.7
gi|1034561518|ref|XM_011542065.2| PREDICTED: Homo sapiens thyro... 30.2 3.7
gi|684179362|ref|NR_125979.1| Homo sapiens uncharacterized LOC1... 30.2 3.7
gi|1034697813|ref|XR_957516.2| PREDICTED: Homo sapiens uncharac... 30.2 3.7
gi|1034692494|ref|XR_001754169.1| PREDICTED: Homo sapiens uncha... 30.2 3.7
gi|1034692492|ref|XR_001754166.1| PREDICTED: Homo sapiens uncha... 30.2 3.7
gi|1034692493|ref|XR_001754168.1| PREDICTED: Homo sapiens uncha... 30.2 3.7
gi|1034678860|ref|XR_001735043.1| PREDICTED: Homo sapiens uncha... 30.2 3.7
gi|45827732|ref|NM_003079.4| Homo sapiens SWI/SNF related, matr... 30.2 3.7
gi|256017258|ref|NM_001135.3| Homo sapiens aggrecan (ACAN), tra... 30.2 3.7
gi|256017256|ref|NM_013227.3| Homo sapiens aggrecan (ACAN), tra... 30.2 3.7
gi|1034589932|ref|XM_017021987.1| PREDICTED: Homo sapiens aggre... 30.2 3.7
gi|1034589930|ref|XM_017021986.1| PREDICTED: Homo sapiens aggre... 30.2 3.7
gi|1034589928|ref|XM_017021985.1| PREDICTED: Homo sapiens aggre... 30.2 3.7
gi|767983505|ref|XM_011521314.1| PREDICTED: Homo sapiens aggrec... 30.2 3.7
gi|767983503|ref|XM_011521313.1| PREDICTED: Homo sapiens aggrec... 30.2 3.7
gi|578826685|ref|XM_006720419.1| PREDICTED: Homo sapiens aggrec... 30.2 3.7
gi|767978265|ref|XM_011535312.1| PREDICTED: Homo sapiens epithe... 30.2 3.7
gi|1034663264|ref|XR_928589.2| PREDICTED: Homo sapiens uncharac... 30.2 3.7
gi|1034644045|ref|XM_017009185.1| PREDICTED: Homo sapiens dynei... 30.2 3.7
gi|1034642518|ref|XR_001741641.1| PREDICTED: Homo sapiens uncha... 30.2 3.7
gi|1034642516|ref|XR_001741639.1| PREDICTED: Homo sapiens uncha... 30.2 3.7
gi|1034642517|ref|XR_001741640.1| PREDICTED: Homo sapiens uncha... 30.2 3.7
gi|1034565171|ref|XR_001738185.1| PREDICTED: Homo sapiens uncha... 30.2 3.7
gi|1034555810|ref|XM_017000407.1| PREDICTED: Homo sapiens MOB k... 30.2 3.7
gi|134142060|ref|NM_145279.4| Homo sapiens MOB kinase activator... 30.2 3.7
gi|134142063|ref|NM_201403.2| Homo sapiens MOB kinase activator... 30.2 3.7
> gi|767919673|ref|XM_011511807.1| PREDICTED: Homo sapiens interleukin
1 receptor type 2 (IL1R2), transcript variant X9, mRNA
Length=3855
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 2824 CCAGGAGAAGAAGAGACACGGATG 2847
> gi|1034616487|ref|XR_923024.2| PREDICTED: Homo sapiens interleukin
1 receptor type 2 (IL1R2), transcript variant X7, misc_RNA
Length=3583
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 2824 CCAGGAGAAGAAGAGACACGGATG 2847
> gi|1034616481|ref|XM_011511801.2| PREDICTED: Homo sapiens interleukin
1 receptor type 2 (IL1R2), transcript variant X1, mRNA
Length=3938
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 2824 CCAGGAGAAGAAGAGACACGGATG 2847
> gi|1034616485|ref|XM_011511804.2| PREDICTED: Homo sapiens interleukin
1 receptor type 2 (IL1R2), transcript variant X5, mRNA
Length=1510
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 517 CCAGGAGAAGAAGAGACACGGATG 540
> gi|1034616486|ref|XM_011511805.2| PREDICTED: Homo sapiens interleukin
1 receptor type 2 (IL1R2), transcript variant X6, mRNA
Length=2283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 1290 CCAGGAGAAGAAGAGACACGGATG 1313
> gi|387527982|ref|NR_048564.1| Homo sapiens interleukin 1 receptor
type 2 (IL1R2), transcript variant 2, non-coding RNA
Length=1463
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 451 CCAGGAGAAGAAGAGACACGGATG 474
> gi|1034616483|ref|XM_011511803.2| PREDICTED: Homo sapiens interleukin
1 receptor type 2 (IL1R2), transcript variant X3, mRNA
Length=3396
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 2403 CCAGGAGAAGAAGAGACACGGATG 2426
> gi|387527983|ref|NM_001261419.1| Homo sapiens interleukin 1 receptor
type 2 (IL1R2), transcript variant 3, mRNA
Length=1204
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 464 CCAGGAGAAGAAGAGACACGGATG 487
> gi|27894332|ref|NM_004633.3| Homo sapiens interleukin 1 receptor
type 2 (IL1R2), transcript variant 1, mRNA
Length=1484
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 464 CCAGGAGAAGAAGAGACACGGATG 487
> gi|1034616488|ref|XM_017004889.1| PREDICTED: Homo sapiens interleukin
1 receptor type 2 (IL1R2), transcript variant X8, mRNA
Length=1367
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 374 CCAGGAGAAGAAGAGACACGGATG 397
> gi|1034616484|ref|XM_006712734.3| PREDICTED: Homo sapiens interleukin
1 receptor type 2 (IL1R2), transcript variant X4, mRNA
Length=1481
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 488 CCAGGAGAAGAAGAGACACGGATG 511
> gi|1034616482|ref|XM_006712736.3| PREDICTED: Homo sapiens interleukin
1 receptor type 2 (IL1R2), transcript variant X2, mRNA
Length=1518
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGACACGGATG 24
||||||||||||||||||||||||
Sbjct 525 CCAGGAGAAGAAGAGACACGGATG 548
> gi|953768341|ref|NM_000876.3| Homo sapiens insulin like growth
factor 2 receptor (IGF2R), mRNA
Length=14058
Score = 32.2 bits (16), Expect = 0.94
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 1 CCAGGAGAAGAAGAGA 16
||||||||||||||||
Sbjct 5068 CCAGGAGAAGAAGAGA 5053
> gi|140161535|ref|NM_015233.5| Homo sapiens microtubule associated
tumor suppressor candidate 2 (MTUS2), transcript variant
2, mRNA
Length=4009
Score = 32.2 bits (16), Expect = 0.94
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGA 16
||||||||||||||||
Sbjct 1088 CCAGGAGAAGAAGAGA 1103
> gi|1034584181|ref|XM_011535022.2| PREDICTED: Homo sapiens microtubule
associated tumor suppressor candidate 2 (MTUS2), transcript
variant X7, mRNA
Length=4589
Score = 32.2 bits (16), Expect = 0.94
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGA 16
||||||||||||||||
Sbjct 1686 CCAGGAGAAGAAGAGA 1701
> gi|140161497|ref|NM_001033602.2| Homo sapiens microtubule associated
tumor suppressor candidate 2 (MTUS2), transcript variant
1, mRNA
Length=6957
Score = 32.2 bits (16), Expect = 0.94
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGA 16
||||||||||||||||
Sbjct 4036 CCAGGAGAAGAAGAGA 4051
> gi|1034584179|ref|XM_017020502.1| PREDICTED: Homo sapiens microtubule
associated tumor suppressor candidate 2 (MTUS2), transcript
variant X6, mRNA
Length=7472
Score = 32.2 bits (16), Expect = 0.94
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGA 16
||||||||||||||||
Sbjct 4569 CCAGGAGAAGAAGAGA 4584
> gi|1034584174|ref|XM_011535021.2| PREDICTED: Homo sapiens microtubule
associated tumor suppressor candidate 2 (MTUS2), transcript
variant X3, mRNA
Length=7461
Score = 32.2 bits (16), Expect = 0.94
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGA 16
||||||||||||||||
Sbjct 4558 CCAGGAGAAGAAGAGA 4573
> gi|1034584173|ref|XM_011535020.2| PREDICTED: Homo sapiens microtubule
associated tumor suppressor candidate 2 (MTUS2), transcript
variant X2, mRNA
Length=7464
Score = 32.2 bits (16), Expect = 0.94
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGA 16
||||||||||||||||
Sbjct 4561 CCAGGAGAAGAAGAGA 4576
> gi|1034584172|ref|XM_011535019.2| PREDICTED: Homo sapiens microtubule
associated tumor suppressor candidate 2 (MTUS2), transcript
variant X1, mRNA
Length=7524
Score = 32.2 bits (16), Expect = 0.94
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAGA 16
||||||||||||||||
Sbjct 4621 CCAGGAGAAGAAGAGA 4636
> gi|1034681753|ref|XR_432747.3| PREDICTED: Homo sapiens uncharacterized
LOC102723966 (LOC102723966), ncRNA
Length=1727
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 CAGGAGAAGAAGAGA 16
|||||||||||||||
Sbjct 444 CAGGAGAAGAAGAGA 430
> gi|1034577175|ref|XR_428993.3| PREDICTED: Homo sapiens uncharacterized
LOC102723966 (LOC102723966), ncRNA
Length=1727
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 CAGGAGAAGAAGAGA 16
|||||||||||||||
Sbjct 444 CAGGAGAAGAAGAGA 430
> gi|1034561518|ref|XM_011542065.2| PREDICTED: Homo sapiens thyroid
stimulating hormone beta (TSHB), transcript variant X1,
mRNA
Length=2202
Score = 30.2 bits (15), Expect = 3.7
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 6 AGAAGAAGAGACACGGATG 24
||||||||||||| |||||
Sbjct 2182 AGAAGAAGAGACATGGATG 2164
> gi|684179362|ref|NR_125979.1| Homo sapiens uncharacterized LOC101929516
(LOC101929516), long non-coding RNA
Length=641
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 4 GGAGAAGAAGAGACA 18
|||||||||||||||
Sbjct 281 GGAGAAGAAGAGACA 267
> gi|1034697813|ref|XR_957516.2| PREDICTED: Homo sapiens uncharacterized
LOC105375727 (LOC105375727), ncRNA
Length=382
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 305 CCAGGAGAAGAAGAG 319
> gi|1034692494|ref|XR_001754169.1| PREDICTED: Homo sapiens uncharacterized
LOC105374557 (LOC105374557), transcript variant
X3, ncRNA
Length=5025
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 947 CCAGGAGAAGAAGAG 961
> gi|1034692492|ref|XR_001754166.1| PREDICTED: Homo sapiens uncharacterized
LOC105374557 (LOC105374557), transcript variant
X1, ncRNA
Length=5294
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 1216 CCAGGAGAAGAAGAG 1230
> gi|1034692493|ref|XR_001754168.1| PREDICTED: Homo sapiens uncharacterized
LOC105374557 (LOC105374557), transcript variant
X2, ncRNA
Length=5185
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 1107 CCAGGAGAAGAAGAG 1121
> gi|1034678860|ref|XR_001735043.1| PREDICTED: Homo sapiens uncharacterized
LOC107985174 (LOC107985174), transcript variant
X4, ncRNA
Length=6056
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 2 CAGGAGAAGAAGAGA 16
|||||||||||||||
Sbjct 823 CAGGAGAAGAAGAGA 837
> gi|45827732|ref|NM_003079.4| Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily
e, member 1 (SMARCE1), mRNA
Length=2425
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 880 CCAGGAGAAGAAGAG 894
> gi|256017258|ref|NM_001135.3| Homo sapiens aggrecan (ACAN), transcript
variant 1, mRNA
Length=8543
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 2421 CCAGGAGAAGAAGAG 2435
> gi|256017256|ref|NM_013227.3| Homo sapiens aggrecan (ACAN), transcript
variant 2, mRNA
Length=8840
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 2421 CCAGGAGAAGAAGAG 2435
> gi|1034589932|ref|XM_017021987.1| PREDICTED: Homo sapiens aggrecan
(ACAN), transcript variant X5, mRNA
Length=7959
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 2422 CCAGGAGAAGAAGAG 2436
> gi|1034589930|ref|XM_017021986.1| PREDICTED: Homo sapiens aggrecan
(ACAN), transcript variant X3, mRNA
Length=8077
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 2422 CCAGGAGAAGAAGAG 2436
> gi|1034589928|ref|XM_017021985.1| PREDICTED: Homo sapiens aggrecan
(ACAN), transcript variant X2, mRNA
Length=8077
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 2422 CCAGGAGAAGAAGAG 2436
> gi|767983505|ref|XM_011521314.1| PREDICTED: Homo sapiens aggrecan
(ACAN), transcript variant X6, mRNA
Length=8726
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 2422 CCAGGAGAAGAAGAG 2436
> gi|767983503|ref|XM_011521313.1| PREDICTED: Homo sapiens aggrecan
(ACAN), transcript variant X4, mRNA
Length=8840
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 2422 CCAGGAGAAGAAGAG 2436
> gi|578826685|ref|XM_006720419.1| PREDICTED: Homo sapiens aggrecan
(ACAN), transcript variant X1, mRNA
Length=8954
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 2422 CCAGGAGAAGAAGAG 2436
> gi|767978265|ref|XM_011535312.1| PREDICTED: Homo sapiens epithelial
stromal interaction 1 (breast) (EPSTI1), transcript variant
X6, mRNA
Length=4411
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGAGAAGAAGAGAC 17
|||||||||||||||
Sbjct 1104 AGGAGAAGAAGAGAC 1118
> gi|1034663264|ref|XR_928589.2| PREDICTED: Homo sapiens uncharacterized
LOC105375727 (LOC105375727), ncRNA
Length=382
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 305 CCAGGAGAAGAAGAG 319
> gi|1034644045|ref|XM_017009185.1| PREDICTED: Homo sapiens dynein
axonemal heavy chain 5 (DNAH5), transcript variant X10,
mRNA
Length=10952
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 5 GAGAAGAAGAGACAC 19
|||||||||||||||
Sbjct 199 GAGAAGAAGAGACAC 213
> gi|1034642518|ref|XR_001741641.1| PREDICTED: Homo sapiens uncharacterized
LOC105374557 (LOC105374557), transcript variant
X3, ncRNA
Length=5025
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 947 CCAGGAGAAGAAGAG 961
> gi|1034642516|ref|XR_001741639.1| PREDICTED: Homo sapiens uncharacterized
LOC105374557 (LOC105374557), transcript variant
X1, ncRNA
Length=5294
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 1216 CCAGGAGAAGAAGAG 1230
> gi|1034642517|ref|XR_001741640.1| PREDICTED: Homo sapiens uncharacterized
LOC105374557 (LOC105374557), transcript variant
X2, ncRNA
Length=5185
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 1107 CCAGGAGAAGAAGAG 1121
> gi|1034565171|ref|XR_001738185.1| PREDICTED: Homo sapiens uncharacterized
LOC107985174 (LOC107985174), transcript variant
X4, ncRNA
Length=6046
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 2 CAGGAGAAGAAGAGA 16
|||||||||||||||
Sbjct 823 CAGGAGAAGAAGAGA 837
> gi|1034555810|ref|XM_017000407.1| PREDICTED: Homo sapiens MOB
kinase activator 3C (MOB3C), transcript variant X1, mRNA
Length=5751
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 5193 CCAGGAGAAGAAGAG 5207
> gi|134142060|ref|NM_145279.4| Homo sapiens MOB kinase activator
3C (MOB3C), transcript variant 1, mRNA
Length=2804
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 2244 CCAGGAGAAGAAGAG 2258
> gi|134142063|ref|NM_201403.2| Homo sapiens MOB kinase activator
3C (MOB3C), transcript variant 2, mRNA
Length=2822
Score = 30.2 bits (15), Expect = 3.7
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CCAGGAGAAGAAGAG 15
|||||||||||||||
Sbjct 2262 CCAGGAGAAGAAGAG 2276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 4674360680
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2