BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= CCAGAGTCCATGAGGCATTT (evalue = 10)
Length=20
Score E
Sequences producing significant alignments: (Bits) Value
gi|71772358|ref|NM_001019.4| Homo sapiens ribosomal protein S15... 40.1 0.002
gi|71772414|ref|NM_001030009.1| Homo sapiens ribosomal protein ... 40.1 0.002
gi|50083283|ref|NR_002161.1| Homo sapiens family with sequence ... 32.2 0.47
gi|50083282|ref|NR_002160.1| Homo sapiens family with sequence ... 32.2 0.47
gi|1034628677|ref|XM_017028719.1| PREDICTED: Homo sapiens bromo... 30.2 1.9
gi|1034628679|ref|XR_001755193.1| PREDICTED: Homo sapiens bromo... 30.2 1.9
gi|1034628680|ref|XR_001755194.1| PREDICTED: Homo sapiens bromo... 30.2 1.9
gi|1034628683|ref|XM_017028721.1| PREDICTED: Homo sapiens bromo... 30.2 1.9
gi|223972703|ref|NM_001145402.1| Homo sapiens family with seque... 30.2 1.9
gi|767895032|ref|XR_915614.1| PREDICTED: Homo sapiens uncharact... 28.2 7.3
gi|1034681809|ref|XR_913586.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034679272|ref|XR_001735327.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034625558|ref|XM_017027985.1| PREDICTED: Homo sapiens early... 28.2 7.3
gi|1034625556|ref|XM_017027984.1| PREDICTED: Homo sapiens early... 28.2 7.3
gi|1034625554|ref|XM_017027983.1| PREDICTED: Homo sapiens early... 28.2 7.3
gi|578835490|ref|XM_006723600.1| PREDICTED: Homo sapiens early ... 28.2 7.3
gi|160333410|ref|NM_001110514.1| Homo sapiens early B-cell fact... 28.2 7.3
gi|589269270|ref|NR_110805.1| Homo sapiens uncharacterized LOC1... 28.2 7.3
gi|194578894|ref|NR_002824.3| Homo sapiens hect domain and RLD ... 28.2 7.3
gi|301601679|ref|NR_036432.1| Homo sapiens hect domain and RLD ... 28.2 7.3
gi|1034587778|ref|XM_017021530.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|17402883|ref|NM_020958.2| Homo sapiens protein phosphatase 4... 28.2 7.3
gi|1034587780|ref|XR_001750474.1| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|767982480|ref|XR_943857.1| PREDICTED: Homo sapiens uncharact... 28.2 7.3
gi|1034577227|ref|XR_948072.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034649600|ref|XM_017010658.1| PREDICTED: Homo sapiens WD re... 28.2 7.3
gi|1034649599|ref|XM_011535682.2| PREDICTED: Homo sapiens WD re... 28.2 7.3
gi|1034633057|ref|XM_017006319.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034633042|ref|XM_017006314.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034633032|ref|XM_017006310.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034633044|ref|XM_017006315.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034633030|ref|XM_017006309.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034633026|ref|XM_017006307.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034633023|ref|XM_017006306.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034633034|ref|XM_017006311.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034633040|ref|XM_017006313.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034633028|ref|XM_017006308.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034633037|ref|XM_017006312.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034633046|ref|XM_017006316.1| PREDICTED: Homo sapiens NME/N... 28.2 7.3
gi|1034615398|ref|XM_017004551.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615374|ref|XM_011511510.2| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615379|ref|XM_017004543.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615381|ref|XM_017004544.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615377|ref|XM_017004542.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615372|ref|XM_017004541.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615402|ref|XM_017004553.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615376|ref|XM_011511512.2| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615371|ref|XM_011511509.2| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615375|ref|XM_011511511.2| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615370|ref|XM_011511508.2| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615400|ref|XM_017004552.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615392|ref|XM_017004548.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615396|ref|XM_017004550.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615389|ref|XM_017004547.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615391|ref|XM_005246695.4| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615384|ref|XM_005246694.4| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615387|ref|XM_017004546.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615383|ref|XM_011511513.2| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615394|ref|XM_017004549.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034615385|ref|XM_017004545.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|155722997|ref|NM_022058.3| Homo sapiens solute carrier famil... 28.2 7.3
gi|295821220|ref|NM_001178015.1| Homo sapiens solute carrier fa... 28.2 7.3
gi|295821222|ref|NM_001178016.1| Homo sapiens solute carrier fa... 28.2 7.3
gi|1034565540|ref|XR_001738394.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
> gi|71772358|ref|NM_001019.4| Homo sapiens ribosomal protein S15a
(RPS15A), transcript variant 2, mRNA
Length=554
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAGGCATTT 20
||||||||||||||||||||
Sbjct 535 CCAGAGTCCATGAGGCATTT 516
> gi|71772414|ref|NM_001030009.1| Homo sapiens ribosomal protein
S15a (RPS15A), transcript variant 1, mRNA
Length=488
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAGGCATTT 20
||||||||||||||||||||
Sbjct 469 CCAGAGTCCATGAGGCATTT 450
> gi|50083283|ref|NR_002161.1| Homo sapiens family with sequence
similarity 224 member A (non-protein coding) (FAM224A), long
non-coding RNA
Length=463
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAGGC 16
||||||||||||||||
Sbjct 365 CCAGAGTCCATGAGGC 350
> gi|50083282|ref|NR_002160.1| Homo sapiens family with sequence
similarity 224 member B (non-protein coding) (FAM224B), long
non-coding RNA
Length=462
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAGGC 16
||||||||||||||||
Sbjct 344 CCAGAGTCCATGAGGC 329
> gi|1034628677|ref|XM_017028719.1| PREDICTED: Homo sapiens bromodomain
containing 1 (BRD1), transcript variant X7, mRNA
Length=8741
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 6 GTCCATGAGGCATTT 20
|||||||||||||||
Sbjct 5947 GTCCATGAGGCATTT 5933
> gi|1034628679|ref|XR_001755193.1| PREDICTED: Homo sapiens bromodomain
containing 1 (BRD1), transcript variant X8, misc_RNA
Length=8678
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 6 GTCCATGAGGCATTT 20
|||||||||||||||
Sbjct 5884 GTCCATGAGGCATTT 5870
> gi|1034628680|ref|XR_001755194.1| PREDICTED: Homo sapiens bromodomain
containing 1 (BRD1), transcript variant X9, misc_RNA
Length=8592
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 6 GTCCATGAGGCATTT 20
|||||||||||||||
Sbjct 5798 GTCCATGAGGCATTT 5784
> gi|1034628683|ref|XM_017028721.1| PREDICTED: Homo sapiens bromodomain
containing 1 (BRD1), transcript variant X11, mRNA
Length=8659
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 6 GTCCATGAGGCATTT 20
|||||||||||||||
Sbjct 5865 GTCCATGAGGCATTT 5851
> gi|223972703|ref|NM_001145402.1| Homo sapiens family with sequence
similarity 71 member E2 (FAM71E2), mRNA
Length=3209
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAGG 15
|||||||||||||||
Sbjct 1238 CCAGAGTCCATGAGG 1224
> gi|767895032|ref|XR_915614.1| PREDICTED: Homo sapiens uncharacterized
LOC101927598 (LOC101927598), ncRNA
Length=6167
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 TCCATGAGGCATTT 20
||||||||||||||
Sbjct 1558 TCCATGAGGCATTT 1545
> gi|1034681809|ref|XR_913586.2| PREDICTED: Homo sapiens uncharacterized
LOC105369520 (LOC105369520), transcript variant X2,
ncRNA
Length=4707
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CAGAGTCCATGAGG 15
||||||||||||||
Sbjct 3745 CAGAGTCCATGAGG 3732
> gi|1034679272|ref|XR_001735327.1| PREDICTED: Homo sapiens uncharacterized
LOC105371692 (LOC105371692), transcript variant
X2, ncRNA
Length=10498
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 7 TCCATGAGGCATTT 20
||||||||||||||
Sbjct 1332 TCCATGAGGCATTT 1345
> gi|1034625558|ref|XM_017027985.1| PREDICTED: Homo sapiens early
B-cell factor 4 (EBF4), transcript variant X4, mRNA
Length=2065
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAG 14
||||||||||||||
Sbjct 1907 CCAGAGTCCATGAG 1894
> gi|1034625556|ref|XM_017027984.1| PREDICTED: Homo sapiens early
B-cell factor 4 (EBF4), transcript variant X3, mRNA
Length=2909
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAG 14
||||||||||||||
Sbjct 2751 CCAGAGTCCATGAG 2738
> gi|1034625554|ref|XM_017027983.1| PREDICTED: Homo sapiens early
B-cell factor 4 (EBF4), transcript variant X1, mRNA
Length=2803
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAG 14
||||||||||||||
Sbjct 2645 CCAGAGTCCATGAG 2632
> gi|578835490|ref|XM_006723600.1| PREDICTED: Homo sapiens early
B-cell factor 4 (EBF4), transcript variant X2, mRNA
Length=2706
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAG 14
||||||||||||||
Sbjct 2548 CCAGAGTCCATGAG 2535
> gi|160333410|ref|NM_001110514.1| Homo sapiens early B-cell factor
4 (EBF4), mRNA
Length=2931
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAG 14
||||||||||||||
Sbjct 2753 CCAGAGTCCATGAG 2740
> gi|589269270|ref|NR_110805.1| Homo sapiens uncharacterized LOC101927207
(LOC101927207), long non-coding RNA
Length=1754
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 AGAGTCCATGAGGCATTT 20
||||||| ||||||||||
Sbjct 506 AGAGTCCCTGAGGCATTT 489
> gi|194578894|ref|NR_002824.3| Homo sapiens hect domain and RLD
2 pseudogene 2 (HERC2P2), non-coding RNA
Length=6075
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 TCCATGAGGCATTT 20
||||||||||||||
Sbjct 3232 TCCATGAGGCATTT 3219
> gi|301601679|ref|NR_036432.1| Homo sapiens hect domain and RLD
2 pseudogene 3 (HERC2P3), non-coding RNA
Length=4292
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 TCCATGAGGCATTT 20
||||||||||||||
Sbjct 3026 TCCATGAGGCATTT 3013
> gi|1034587778|ref|XM_017021530.1| PREDICTED: Homo sapiens protein
phosphatase 4, regulatory subunit 4 (PPP4R4), transcript
variant X7, mRNA
Length=4118
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 CAGAGTCCATGAGG 15
||||||||||||||
Sbjct 403 CAGAGTCCATGAGG 416
> gi|17402883|ref|NM_020958.2| Homo sapiens protein phosphatase
4, regulatory subunit 4 (PPP4R4), transcript variant 2, mRNA
Length=923
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 CAGAGTCCATGAGG 15
||||||||||||||
Sbjct 445 CAGAGTCCATGAGG 458
> gi|1034587780|ref|XR_001750474.1| PREDICTED: Homo sapiens protein
phosphatase 4, regulatory subunit 4 (PPP4R4), transcript
variant X8, misc_RNA
Length=907
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 CAGAGTCCATGAGG 15
||||||||||||||
Sbjct 445 CAGAGTCCATGAGG 458
> gi|767982480|ref|XR_943857.1| PREDICTED: Homo sapiens uncharacterized
LOC101927598 (LOC101927598), ncRNA
Length=6171
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 TCCATGAGGCATTT 20
||||||||||||||
Sbjct 1558 TCCATGAGGCATTT 1545
> gi|1034577227|ref|XR_948072.2| PREDICTED: Homo sapiens uncharacterized
LOC105369520 (LOC105369520), transcript variant X2,
ncRNA
Length=4711
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CAGAGTCCATGAGG 15
||||||||||||||
Sbjct 3749 CAGAGTCCATGAGG 3736
> gi|1034649600|ref|XM_017010658.1| PREDICTED: Homo sapiens WD
repeat domain 27 (WDR27), transcript variant X2, mRNA
Length=4669
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAG 14
||||||||||||||
Sbjct 4169 CCAGAGTCCATGAG 4156
> gi|1034649599|ref|XM_011535682.2| PREDICTED: Homo sapiens WD
repeat domain 27 (WDR27), transcript variant X1, mRNA
Length=4842
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 CCAGAGTCCATGAG 14
||||||||||||||
Sbjct 4336 CCAGAGTCCATGAG 4323
> gi|1034633057|ref|XM_017006319.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X22, mRNA
Length=2426
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 1648 AGAGTCCATGATGCATTT 1665
> gi|1034633042|ref|XM_017006314.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X12, mRNA
Length=3213
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 2435 AGAGTCCATGATGCATTT 2452
> gi|1034633032|ref|XM_017006310.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X6, mRNA
Length=2717
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 1939 AGAGTCCATGATGCATTT 1956
> gi|1034633044|ref|XM_017006315.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X13, mRNA
Length=2691
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 1913 AGAGTCCATGATGCATTT 1930
> gi|1034633030|ref|XM_017006309.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X5, mRNA
Length=2787
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 2009 AGAGTCCATGATGCATTT 2026
> gi|1034633026|ref|XM_017006307.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X3, mRNA
Length=3208
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 2430 AGAGTCCATGATGCATTT 2447
> gi|1034633023|ref|XM_017006306.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X1, mRNA
Length=2759
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 1981 AGAGTCCATGATGCATTT 1998
> gi|1034633034|ref|XM_017006311.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X7, mRNA
Length=2642
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 1864 AGAGTCCATGATGCATTT 1881
> gi|1034633040|ref|XM_017006313.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X11, mRNA
Length=5262
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 4484 AGAGTCCATGATGCATTT 4501
> gi|1034633028|ref|XM_017006308.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X4, mRNA
Length=4755
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 3977 AGAGTCCATGATGCATTT 3994
> gi|1034633037|ref|XM_017006312.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X9, mRNA
Length=4638
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 3860 AGAGTCCATGATGCATTT 3877
> gi|1034633046|ref|XM_017006316.1| PREDICTED: Homo sapiens NME/NM23
family member 9 (NME9), transcript variant X14, mRNA
Length=4566
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 AGAGTCCATGAGGCATTT 20
||||||||||| ||||||
Sbjct 3788 AGAGTCCATGATGCATTT 3805
> gi|1034615398|ref|XM_017004551.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X19, mRNA
Length=4958
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 159 GTCCATGAGGCATT 172
> gi|1034615374|ref|XM_011511510.2| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X4, mRNA
Length=5388
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 664 GTCCATGAGGCATT 677
> gi|1034615379|ref|XM_017004543.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X8, mRNA
Length=5357
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 664 GTCCATGAGGCATT 677
> gi|1034615381|ref|XM_017004544.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X9, mRNA
Length=5355
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 664 GTCCATGAGGCATT 677
> gi|1034615377|ref|XM_017004542.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X7, mRNA
Length=5390
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 664 GTCCATGAGGCATT 677
> gi|1034615372|ref|XM_017004541.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X3, mRNA
Length=5480
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 664 GTCCATGAGGCATT 677
> gi|1034615402|ref|XM_017004553.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X21, mRNA
Length=5499
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 770 GTCCATGAGGCATT 783
> gi|1034615376|ref|XM_011511512.2| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X6, mRNA
Length=5370
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 664 GTCCATGAGGCATT 677
> gi|1034615371|ref|XM_011511509.2| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X2, mRNA
Length=5460
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 664 GTCCATGAGGCATT 677
> gi|1034615375|ref|XM_011511511.2| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X5, mRNA
Length=5373
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 664 GTCCATGAGGCATT 677
> gi|1034615370|ref|XM_011511508.2| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X1, mRNA
Length=5463
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 664 GTCCATGAGGCATT 677
> gi|1034615400|ref|XM_017004552.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X20, mRNA
Length=5479
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 770 GTCCATGAGGCATT 783
> gi|1034615392|ref|XM_017004548.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X16, mRNA
Length=5574
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 850 GTCCATGAGGCATT 863
> gi|1034615396|ref|XM_017004550.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X18, mRNA
Length=5602
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 876 GTCCATGAGGCATT 889
> gi|1034615389|ref|XM_017004547.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X14, mRNA
Length=5695
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 876 GTCCATGAGGCATT 889
> gi|1034615391|ref|XM_005246695.4| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X15, mRNA
Length=5585
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 876 GTCCATGAGGCATT 889
> gi|1034615384|ref|XM_005246694.4| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X11, mRNA
Length=5675
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 876 GTCCATGAGGCATT 889
> gi|1034615387|ref|XM_017004546.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X13, mRNA
Length=5862
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 1153 GTCCATGAGGCATT 1166
> gi|1034615383|ref|XM_011511513.2| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X10, mRNA
Length=5952
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 1153 GTCCATGAGGCATT 1166
> gi|1034615394|ref|XM_017004549.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X17, mRNA
Length=5757
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 1028 GTCCATGAGGCATT 1041
> gi|1034615385|ref|XM_017004545.1| PREDICTED: Homo sapiens solute
carrier family 4 member 10 (SLC4A10), transcript variant
X12, mRNA
Length=5881
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 1062 GTCCATGAGGCATT 1075
> gi|155722997|ref|NM_022058.3| Homo sapiens solute carrier family
4 member 10 (SLC4A10), transcript variant 2, mRNA
Length=5580
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 821 GTCCATGAGGCATT 834
> gi|295821220|ref|NM_001178015.1| Homo sapiens solute carrier
family 4 member 10 (SLC4A10), transcript variant 1, mRNA
Length=5671
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 821 GTCCATGAGGCATT 834
> gi|295821222|ref|NM_001178016.1| Homo sapiens solute carrier
family 4 member 10 (SLC4A10), transcript variant 3, mRNA
Length=5717
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 GTCCATGAGGCATT 19
||||||||||||||
Sbjct 957 GTCCATGAGGCATT 970
> gi|1034565540|ref|XR_001738394.1| PREDICTED: Homo sapiens uncharacterized
LOC105371692 (LOC105371692), transcript variant
X2, ncRNA
Length=10498
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 7 TCCATGAGGCATTT 20
||||||||||||||
Sbjct 1332 TCCATGAGGCATTT 1345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2337180340
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2