BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= CAGCCTGGACAAGCTCTACC (evalue = 10)
Length=20
Score E
Sequences producing significant alignments: (Bits) Value
gi|737676316|ref|NM_001303265.1| Homo sapiens immature colon ca... 40.1 0.002
gi|737676268|ref|NM_001545.2| Homo sapiens immature colon carci... 40.1 0.002
gi|459642364|ref|NM_001277115.1| Homo sapiens dynein axonemal h... 34.2 0.12
gi|93102378|ref|NM_018557.2| Homo sapiens LDL receptor related ... 32.2 0.47
gi|1034614680|ref|XM_017004342.1| PREDICTED: Homo sapiens LDL r... 32.2 0.47
gi|1034614677|ref|XM_017004341.1| PREDICTED: Homo sapiens LDL r... 32.2 0.47
gi|1034614679|ref|XR_001738778.1| PREDICTED: Homo sapiens LDL r... 32.2 0.47
gi|1034698254|ref|XR_001759377.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034598493|ref|XM_011524439.2| PREDICTED: Homo sapiens N-ace... 30.2 1.9
gi|66346701|ref|NM_153006.2| Homo sapiens N-acetylglutamate syn... 30.2 1.9
gi|767993830|ref|XM_011524438.1| PREDICTED: Homo sapiens N-acet... 30.2 1.9
gi|740087021|ref|NM_004246.2| Homo sapiens glucagon like peptid... 30.2 1.9
gi|1034602083|ref|XM_017025339.1| PREDICTED: Homo sapiens gluca... 30.2 1.9
gi|1034602082|ref|XM_011524077.2| PREDICTED: Homo sapiens gluca... 30.2 1.9
gi|1034602087|ref|XM_017025341.1| PREDICTED: Homo sapiens gluca... 30.2 1.9
gi|1034602085|ref|XM_017025340.1| PREDICTED: Homo sapiens gluca... 30.2 1.9
gi|994304786|ref|NM_001320173.1| Homo sapiens chromosome 14 ope... 30.2 1.9
gi|1034586303|ref|XM_011536471.2| PREDICTED: Homo sapiens chrom... 30.2 1.9
gi|994310945|ref|NM_001001872.3| Homo sapiens chromosome 14 ope... 30.2 1.9
gi|1034586296|ref|XM_017021029.1| PREDICTED: Homo sapiens chrom... 30.2 1.9
gi|1034586300|ref|XM_017021030.1| PREDICTED: Homo sapiens chrom... 30.2 1.9
gi|1034586302|ref|XR_943395.2| PREDICTED: Homo sapiens chromoso... 30.2 1.9
gi|1034586298|ref|XR_943398.2| PREDICTED: Homo sapiens chromoso... 30.2 1.9
gi|1034586299|ref|XR_943399.2| PREDICTED: Homo sapiens chromoso... 30.2 1.9
gi|1034672537|ref|XR_001746647.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034608223|ref|XR_001753708.1| PREDICTED: Homo sapiens polym... 28.2 7.3
gi|1034608220|ref|XR_001753706.1| PREDICTED: Homo sapiens polym... 28.2 7.3
gi|1034608222|ref|XR_001753707.1| PREDICTED: Homo sapiens polym... 28.2 7.3
gi|110618252|ref|NM_005035.3| Homo sapiens polymerase (RNA) mit... 28.2 7.3
gi|1034608221|ref|XM_005259580.3| PREDICTED: Homo sapiens polym... 28.2 7.3
gi|1034598570|ref|XM_006721739.3| PREDICTED: Homo sapiens kerat... 28.2 7.3
gi|1034598571|ref|XM_011524460.2| PREDICTED: Homo sapiens kerat... 28.2 7.3
gi|192807291|ref|NM_019016.2| Homo sapiens keratin 24 (KRT24), ... 28.2 7.3
gi|1034598568|ref|XM_017024299.1| PREDICTED: Homo sapiens kerat... 28.2 7.3
gi|1034595300|ref|XM_017023455.1| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595298|ref|XM_017023454.1| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595294|ref|XM_017023452.1| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|767990293|ref|XM_011523242.1| PREDICTED: Homo sapiens transl... 28.2 7.3
gi|767990278|ref|XM_011523235.1| PREDICTED: Homo sapiens transl... 28.2 7.3
gi|1034595288|ref|XM_017023449.1| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595284|ref|XM_017023447.1| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595279|ref|XM_017023445.1| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595277|ref|XM_011523236.2| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|767990287|ref|XM_011523239.1| PREDICTED: Homo sapiens transl... 28.2 7.3
gi|1034595296|ref|XM_017023453.1| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|767990291|ref|XM_011523241.1| PREDICTED: Homo sapiens transl... 28.2 7.3
gi|767990295|ref|XM_011523243.1| PREDICTED: Homo sapiens transl... 28.2 7.3
gi|1034595292|ref|XM_017023451.1| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595290|ref|XM_017023450.1| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|767990289|ref|XM_011523240.1| PREDICTED: Homo sapiens transl... 28.2 7.3
gi|1034595286|ref|XM_017023448.1| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595282|ref|XM_017023446.1| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|767990285|ref|XM_011523238.1| PREDICTED: Homo sapiens transl... 28.2 7.3
gi|573014779|ref|NM_001288994.1| Homo sapiens translin associat... 28.2 7.3
gi|573014771|ref|NM_001288992.1| Homo sapiens translin associat... 28.2 7.3
gi|573014749|ref|NM_001288991.1| Homo sapiens translin associat... 28.2 7.3
gi|573014769|ref|NM_001288993.1| Homo sapiens translin associat... 28.2 7.3
gi|573014784|ref|NM_001288990.1| Homo sapiens translin associat... 28.2 7.3
gi|573014751|ref|NM_018430.3| Homo sapiens translin associated ... 28.2 7.3
gi|1034595281|ref|XM_011523237.2| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595278|ref|XM_005256049.4| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595276|ref|XM_011523234.2| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595273|ref|XM_011523231.2| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595275|ref|XM_011523233.2| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595274|ref|XM_011523232.2| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034595272|ref|XM_011523230.2| PREDICTED: Homo sapiens trans... 28.2 7.3
gi|1034580857|ref|XM_006719526.2| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034580858|ref|XM_011538613.2| PREDICTED: Homo sapiens prote... 28.2 7.3
gi|1034574680|ref|XM_017018051.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|767970446|ref|XM_011542933.1| PREDICTED: Homo sapiens GRAM d... 28.2 7.3
gi|1034574671|ref|XM_011542930.2| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|557440792|ref|NM_001286564.1| Homo sapiens GRAM domain conta... 28.2 7.3
gi|1034574678|ref|XM_017018050.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574669|ref|XM_005271623.4| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574661|ref|XM_011542929.2| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574658|ref|XM_017018043.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574651|ref|XM_005271624.4| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574660|ref|XM_005271619.4| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574662|ref|XM_017018044.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|557440805|ref|NM_020716.2| Homo sapiens GRAM domain containi... 28.2 7.3
gi|557440811|ref|NM_001286563.1| Homo sapiens GRAM domain conta... 28.2 7.3
gi|1034574676|ref|XM_017018049.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574674|ref|XM_017018048.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574672|ref|XM_017018047.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574670|ref|XM_011542931.2| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574667|ref|XM_017018046.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574665|ref|XM_017018045.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574664|ref|XM_005271621.4| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574641|ref|XM_017018036.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574639|ref|XM_017018035.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574637|ref|XM_017018034.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574645|ref|XM_017018038.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574652|ref|XM_017018040.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574648|ref|XM_011542926.2| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574647|ref|XM_006718892.3| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574643|ref|XM_017018037.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574649|ref|XM_017018039.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574656|ref|XM_017018042.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034574654|ref|XM_017018041.1| PREDICTED: Homo sapiens GRAM ... 28.2 7.3
gi|1034646574|ref|XM_017010002.1| PREDICTED: Homo sapiens PDZ a... 28.2 7.3
gi|196162710|ref|NM_001131027.1| Homo sapiens PDZ and LIM domai... 28.2 7.3
gi|196259777|ref|NM_003687.3| Homo sapiens PDZ and LIM domain 4... 28.2 7.3
gi|548923747|ref|NM_001284426.1| Homo sapiens myosin VIIA and R... 28.2 7.3
gi|767922900|ref|XM_011533575.1| PREDICTED: Homo sapiens myosin... 28.2 7.3
gi|548923695|ref|NM_001284425.1| Homo sapiens myosin VIIA and R... 28.2 7.3
gi|548923930|ref|NM_001284424.1| Homo sapiens myosin VIIA and R... 28.2 7.3
gi|548923958|ref|NR_104316.1| Homo sapiens myosin VIIA and Rab ... 28.2 7.3
gi|548923902|ref|NM_015460.3| Homo sapiens myosin VIIA and Rab ... 28.2 7.3
gi|548923750|ref|NM_001284423.1| Homo sapiens myosin VIIA and R... 28.2 7.3
gi|1034558018|ref|XM_017001114.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|1034558014|ref|XM_017001112.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|1034558016|ref|XM_017001113.1| PREDICTED: Homo sapiens zinc ... 28.2 7.3
gi|520975357|ref|NM_001278647.1| Homo sapiens zinc finger and B... 28.2 7.3
gi|520975363|ref|NM_001278648.1| Homo sapiens zinc finger and B... 28.2 7.3
gi|520975359|ref|NM_005341.3| Homo sapiens zinc finger and BTB ... 28.2 7.3
gi|1034689826|ref|XR_001735859.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034626213|ref|XR_937200.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|209862795|ref|NM_017842.2| Homo sapiens solute carrier famil... 28.2 7.3
gi|1034580513|ref|XM_017019613.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034580519|ref|XM_017019616.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034580517|ref|XM_017019615.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034580511|ref|XM_017019612.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034580522|ref|XM_005269016.4| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034580515|ref|XM_017019614.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|209976984|ref|NM_032410.3| Homo sapiens hook microtubule-tet... 28.2 7.3
gi|571026762|ref|NR_110113.1| Homo sapiens long intergenic non-... 28.2 7.3
> gi|737676316|ref|NM_001303265.1| Homo sapiens immature colon
carcinoma transcript 1 (ICT1), transcript variant 2, mRNA
Length=909
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTACC 20
||||||||||||||||||||
Sbjct 152 CAGCCTGGACAAGCTCTACC 171
> gi|737676268|ref|NM_001545.2| Homo sapiens immature colon carcinoma
transcript 1 (ICT1), transcript variant 1, mRNA
Length=914
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTACC 20
||||||||||||||||||||
Sbjct 152 CAGCCTGGACAAGCTCTACC 171
> gi|459642364|ref|NM_001277115.1| Homo sapiens dynein axonemal
heavy chain 11 (DNAH11), mRNA
Length=13896
Score = 34.2 bits (17), Expect = 0.12
Identities = 17/17 (100%), Gaps = 0/17 (0%)
Strand=Plus/Minus
Query 1 CAGCCTGGACAAGCTCT 17
|||||||||||||||||
Sbjct 8632 CAGCCTGGACAAGCTCT 8616
> gi|93102378|ref|NM_018557.2| Homo sapiens LDL receptor related
protein 1B (LRP1B), mRNA
Length=16557
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 5 CTGGACAAGCTCTACC 20
||||||||||||||||
Sbjct 7824 CTGGACAAGCTCTACC 7839
> gi|1034614680|ref|XM_017004342.1| PREDICTED: Homo sapiens LDL
receptor related protein 1B (LRP1B), transcript variant X3,
mRNA
Length=10534
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 5 CTGGACAAGCTCTACC 20
||||||||||||||||
Sbjct 1823 CTGGACAAGCTCTACC 1838
> gi|1034614677|ref|XM_017004341.1| PREDICTED: Homo sapiens LDL
receptor related protein 1B (LRP1B), transcript variant X1,
mRNA
Length=21111
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 5 CTGGACAAGCTCTACC 20
||||||||||||||||
Sbjct 12400 CTGGACAAGCTCTACC 12415
> gi|1034614679|ref|XR_001738778.1| PREDICTED: Homo sapiens LDL
receptor related protein 1B (LRP1B), transcript variant X2,
misc_RNA
Length=17224
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 5 CTGGACAAGCTCTACC 20
||||||||||||||||
Sbjct 8586 CTGGACAAGCTCTACC 8601
> gi|1034698254|ref|XR_001759377.1| PREDICTED: Homo sapiens uncharacterized
LOC107987060 (LOC107987060), ncRNA
Length=1014
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 4 CCTGGACAAGCTCTA 18
|||||||||||||||
Sbjct 592 CCTGGACAAGCTCTA 606
> gi|1034598493|ref|XM_011524439.2| PREDICTED: Homo sapiens N-acetylglutamate
synthase (NAGS), transcript variant X2, mRNA
Length=1962
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 1033 CAGCCTGGACAAGCT 1047
> gi|66346701|ref|NM_153006.2| Homo sapiens N-acetylglutamate synthase
(NAGS), mRNA
Length=2086
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 1143 CAGCCTGGACAAGCT 1157
> gi|767993830|ref|XM_011524438.1| PREDICTED: Homo sapiens N-acetylglutamate
synthase (NAGS), transcript variant X1, mRNA
Length=2007
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 1261 CAGCCTGGACAAGCT 1275
> gi|740087021|ref|NM_004246.2| Homo sapiens glucagon like peptide
2 receptor (GLP2R), mRNA
Length=4573
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 34 CAGCCTGGACAAGCT 48
> gi|1034602083|ref|XM_017025339.1| PREDICTED: Homo sapiens glucagon
like peptide 2 receptor (GLP2R), transcript variant X2,
mRNA
Length=4631
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 73 CAGCCTGGACAAGCT 87
> gi|1034602082|ref|XM_011524077.2| PREDICTED: Homo sapiens glucagon
like peptide 2 receptor (GLP2R), transcript variant X1,
mRNA
Length=4688
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 73 CAGCCTGGACAAGCT 87
> gi|1034602087|ref|XM_017025341.1| PREDICTED: Homo sapiens glucagon
like peptide 2 receptor (GLP2R), transcript variant X4,
mRNA
Length=6359
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 75 CAGCCTGGACAAGCT 89
> gi|1034602085|ref|XM_017025340.1| PREDICTED: Homo sapiens glucagon
like peptide 2 receptor (GLP2R), transcript variant X3,
mRNA
Length=6466
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 77 CAGCCTGGACAAGCT 91
> gi|994304786|ref|NM_001320173.1| Homo sapiens chromosome 14 open
reading frame 37 (C14orf37), transcript variant 2, mRNA
Length=2415
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 510 CAGCCTGGACAAGCT 524
> gi|1034586303|ref|XM_011536471.2| PREDICTED: Homo sapiens chromosome
14 open reading frame 37 (C14orf37), transcript variant
X6, mRNA
Length=2214
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 510 CAGCCTGGACAAGCT 524
> gi|994310945|ref|NM_001001872.3| Homo sapiens chromosome 14 open
reading frame 37 (C14orf37), transcript variant 1, mRNA
Length=3226
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 510 CAGCCTGGACAAGCT 524
> gi|1034586296|ref|XM_017021029.1| PREDICTED: Homo sapiens chromosome
14 open reading frame 37 (C14orf37), transcript variant
X1, mRNA
Length=13594
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 367 CAGCCTGGACAAGCT 381
> gi|1034586300|ref|XM_017021030.1| PREDICTED: Homo sapiens chromosome
14 open reading frame 37 (C14orf37), transcript variant
X4, mRNA
Length=13734
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 510 CAGCCTGGACAAGCT 524
> gi|1034586302|ref|XR_943395.2| PREDICTED: Homo sapiens chromosome
14 open reading frame 37 (C14orf37), transcript variant
X5, misc_RNA
Length=9746
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 576 CAGCCTGGACAAGCT 590
> gi|1034586298|ref|XR_943398.2| PREDICTED: Homo sapiens chromosome
14 open reading frame 37 (C14orf37), transcript variant
X2, misc_RNA
Length=4260
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 510 CAGCCTGGACAAGCT 524
> gi|1034586299|ref|XR_943399.2| PREDICTED: Homo sapiens chromosome
14 open reading frame 37 (C14orf37), transcript variant
X3, misc_RNA
Length=4257
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCT 15
|||||||||||||||
Sbjct 510 CAGCCTGGACAAGCT 524
> gi|1034672537|ref|XR_001746647.1| PREDICTED: Homo sapiens uncharacterized
LOC107987060 (LOC107987060), ncRNA
Length=1014
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 4 CCTGGACAAGCTCTA 18
|||||||||||||||
Sbjct 592 CCTGGACAAGCTCTA 606
> gi|1034608223|ref|XR_001753708.1| PREDICTED: Homo sapiens polymerase
(RNA) mitochondrial (POLRMT), transcript variant X4,
misc_RNA
Length=4480
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2043 CAGCCTGGACAAGC 2056
> gi|1034608220|ref|XR_001753706.1| PREDICTED: Homo sapiens polymerase
(RNA) mitochondrial (POLRMT), transcript variant X1,
misc_RNA
Length=4290
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1853 CAGCCTGGACAAGC 1866
> gi|1034608222|ref|XR_001753707.1| PREDICTED: Homo sapiens polymerase
(RNA) mitochondrial (POLRMT), transcript variant X3,
misc_RNA
Length=4255
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1853 CAGCCTGGACAAGC 1866
> gi|110618252|ref|NM_005035.3| Homo sapiens polymerase (RNA) mitochondrial
(POLRMT), mRNA
Length=3800
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1829 CAGCCTGGACAAGC 1842
> gi|1034608221|ref|XM_005259580.3| PREDICTED: Homo sapiens polymerase
(RNA) mitochondrial (POLRMT), transcript variant X2,
mRNA
Length=3847
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1853 CAGCCTGGACAAGC 1866
> gi|1034598570|ref|XM_006721739.3| PREDICTED: Homo sapiens keratin
24 (KRT24), transcript variant X2, mRNA
Length=1572
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 12 GCCTGGACAAGCTC 25
> gi|1034598571|ref|XM_011524460.2| PREDICTED: Homo sapiens keratin
24 (KRT24), transcript variant X3, mRNA
Length=1557
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 12 GCCTGGACAAGCTC 25
> gi|192807291|ref|NM_019016.2| Homo sapiens keratin 24 (KRT24),
mRNA
Length=1897
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 27 GCCTGGACAAGCTC 40
> gi|1034598568|ref|XM_017024299.1| PREDICTED: Homo sapiens keratin
24 (KRT24), transcript variant X1, mRNA
Length=2031
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 12 GCCTGGACAAGCTC 25
> gi|1034595300|ref|XM_017023455.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X25, mRNA
Length=1981
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1720 CAGCCTGGACAAGC 1733
> gi|1034595298|ref|XM_017023454.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X24, mRNA
Length=2092
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1831 CAGCCTGGACAAGC 1844
> gi|1034595294|ref|XM_017023452.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X22, mRNA
Length=2167
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1906 CAGCCTGGACAAGC 1919
> gi|767990293|ref|XM_011523242.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1), transcript
variant X21, mRNA
Length=2188
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1927 CAGCCTGGACAAGC 1940
> gi|767990278|ref|XM_011523235.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1), transcript
variant X6, mRNA
Length=2522
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2261 CAGCCTGGACAAGC 2274
> gi|1034595288|ref|XM_017023449.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X16, mRNA
Length=1938
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1677 CAGCCTGGACAAGC 1690
> gi|1034595284|ref|XM_017023447.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X14, mRNA
Length=2013
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1752 CAGCCTGGACAAGC 1765
> gi|1034595279|ref|XM_017023445.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X9, mRNA
Length=2124
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1863 CAGCCTGGACAAGC 1876
> gi|1034595277|ref|XM_011523236.2| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X7, mRNA
Length=2145
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1884 CAGCCTGGACAAGC 1897
> gi|767990287|ref|XM_011523239.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1), transcript
variant X12, mRNA
Length=2061
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1800 CAGCCTGGACAAGC 1813
> gi|1034595296|ref|XM_017023453.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X23, mRNA
Length=2239
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1978 CAGCCTGGACAAGC 1991
> gi|767990291|ref|XM_011523241.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1), transcript
variant X20, mRNA
Length=2335
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2074 CAGCCTGGACAAGC 2087
> gi|767990295|ref|XM_011523243.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1), transcript
variant X26, mRNA
Length=2142
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1881 CAGCCTGGACAAGC 1894
> gi|1034595292|ref|XM_017023451.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X19, mRNA
Length=2337
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2076 CAGCCTGGACAAGC 2089
> gi|1034595290|ref|XM_017023450.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X18, mRNA
Length=2151
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1890 CAGCCTGGACAAGC 1903
> gi|767990289|ref|XM_011523240.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1), transcript
variant X17, mRNA
Length=2247
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1986 CAGCCTGGACAAGC 1999
> gi|1034595286|ref|XM_017023448.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X15, mRNA
Length=1964
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1703 CAGCCTGGACAAGC 1716
> gi|1034595282|ref|XM_017023446.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X13, mRNA
Length=1991
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1730 CAGCCTGGACAAGC 1743
> gi|767990285|ref|XM_011523238.1| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1), transcript
variant X11, mRNA
Length=2060
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1799 CAGCCTGGACAAGC 1812
> gi|573014779|ref|NM_001288994.1| Homo sapiens translin associated
factor X interacting protein 1 (TSNAXIP1), transcript variant
6, mRNA
Length=2052
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1774 CAGCCTGGACAAGC 1787
> gi|573014771|ref|NM_001288992.1| Homo sapiens translin associated
factor X interacting protein 1 (TSNAXIP1), transcript variant
4, mRNA
Length=2249
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1971 CAGCCTGGACAAGC 1984
> gi|573014749|ref|NM_001288991.1| Homo sapiens translin associated
factor X interacting protein 1 (TSNAXIP1), transcript variant
3, mRNA
Length=2296
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2018 CAGCCTGGACAAGC 2031
> gi|573014769|ref|NM_001288993.1| Homo sapiens translin associated
factor X interacting protein 1 (TSNAXIP1), transcript variant
5, mRNA
Length=2376
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2098 CAGCCTGGACAAGC 2111
> gi|573014784|ref|NM_001288990.1| Homo sapiens translin associated
factor X interacting protein 1 (TSNAXIP1), transcript variant
1, mRNA
Length=2503
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2225 CAGCCTGGACAAGC 2238
> gi|573014751|ref|NM_018430.3| Homo sapiens translin associated
factor X interacting protein 1 (TSNAXIP1), transcript variant
2, mRNA
Length=2692
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2414 CAGCCTGGACAAGC 2427
> gi|1034595281|ref|XM_011523237.2| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X10, mRNA
Length=2647
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2386 CAGCCTGGACAAGC 2399
> gi|1034595278|ref|XM_005256049.4| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X8, mRNA
Length=2680
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2419 CAGCCTGGACAAGC 2432
> gi|1034595276|ref|XM_011523234.2| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X5, mRNA
Length=2755
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2494 CAGCCTGGACAAGC 2507
> gi|1034595273|ref|XM_011523231.2| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X2, mRNA
Length=2866
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2605 CAGCCTGGACAAGC 2618
> gi|1034595275|ref|XM_011523233.2| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X4, mRNA
Length=2812
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2551 CAGCCTGGACAAGC 2564
> gi|1034595274|ref|XM_011523232.2| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X3, mRNA
Length=2839
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2578 CAGCCTGGACAAGC 2591
> gi|1034595272|ref|XM_011523230.2| PREDICTED: Homo sapiens translin
associated factor X interacting protein 1 (TSNAXIP1),
transcript variant X1, mRNA
Length=2887
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 2626 CAGCCTGGACAAGC 2639
> gi|1034580857|ref|XM_006719526.2| PREDICTED: Homo sapiens protein
tyrosine phosphatase, non-receptor type 11 (PTPN11), transcript
variant X1, mRNA
Length=6073
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 TGGACAAGCTCTAC 19
||||||||||||||
Sbjct 1376 TGGACAAGCTCTAC 1389
> gi|1034580858|ref|XM_011538613.2| PREDICTED: Homo sapiens protein
tyrosine phosphatase, non-receptor type 11 (PTPN11), transcript
variant X2, mRNA
Length=6109
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 TGGACAAGCTCTAC 19
||||||||||||||
Sbjct 1412 TGGACAAGCTCTAC 1425
> gi|1034574680|ref|XM_017018051.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X28, mRNA
Length=7268
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1025 CAGCGTGGACAAGCTCTA 1042
> gi|767970446|ref|XM_011542933.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X23, mRNA
Length=8047
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1804 CAGCGTGGACAAGCTCTA 1821
> gi|1034574671|ref|XM_011542930.2| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X22, mRNA
Length=4424
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 2193 CAGCGTGGACAAGCTCTA 2210
> gi|557440792|ref|NM_001286564.1| Homo sapiens GRAM domain containing
1B (GRAMD1B), transcript variant 3, mRNA
Length=7636
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1392 CAGCGTGGACAAGCTCTA 1409
> gi|1034574678|ref|XM_017018050.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X27, mRNA
Length=7652
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1421 CAGCGTGGACAAGCTCTA 1438
> gi|1034574669|ref|XM_005271623.4| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X20, mRNA
Length=3658
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1427 CAGCGTGGACAAGCTCTA 1444
> gi|1034574661|ref|XM_011542929.2| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X15, mRNA
Length=3783
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1552 CAGCGTGGACAAGCTCTA 1569
> gi|1034574658|ref|XM_017018043.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X13, mRNA
Length=7569
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1338 CAGCGTGGACAAGCTCTA 1355
> gi|1034574651|ref|XM_005271624.4| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X9, mRNA
Length=3573
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1342 CAGCGTGGACAAGCTCTA 1359
> gi|1034574660|ref|XM_005271619.4| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X14, mRNA
Length=3893
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1662 CAGCGTGGACAAGCTCTA 1679
> gi|1034574662|ref|XM_017018044.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X16, mRNA
Length=7893
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1662 CAGCGTGGACAAGCTCTA 1679
> gi|557440805|ref|NM_020716.2| Homo sapiens GRAM domain containing
1B (GRAMD1B), transcript variant 2, mRNA
Length=7906
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1662 CAGCGTGGACAAGCTCTA 1679
> gi|557440811|ref|NM_001286563.1| Homo sapiens GRAM domain containing
1B (GRAMD1B), transcript variant 1, mRNA
Length=7927
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1683 CAGCGTGGACAAGCTCTA 1700
> gi|1034574676|ref|XM_017018049.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X26, mRNA
Length=8376
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 2145 CAGCGTGGACAAGCTCTA 2162
> gi|1034574674|ref|XM_017018048.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X25, mRNA
Length=8347
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 2104 CAGCGTGGACAAGCTCTA 2121
> gi|1034574672|ref|XM_017018047.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X24, mRNA
Length=8391
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 2148 CAGCGTGGACAAGCTCTA 2165
> gi|1034574670|ref|XM_011542931.2| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X21, mRNA
Length=4338
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 2107 CAGCGTGGACAAGCTCTA 2124
> gi|1034574667|ref|XM_017018046.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X19, mRNA
Length=4382
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 2151 CAGCGTGGACAAGCTCTA 2168
> gi|1034574665|ref|XM_017018045.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X18, mRNA
Length=8277
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 6046 CAGCGTGGACAAGCTCTA 6063
> gi|1034574664|ref|XM_005271621.4| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X17, mRNA
Length=8280
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 6049 CAGCGTGGACAAGCTCTA 6066
> gi|1034574641|ref|XM_017018036.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X3, mRNA
Length=8345
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 2114 CAGCGTGGACAAGCTCTA 2131
> gi|1034574639|ref|XM_017018035.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X2, mRNA
Length=3875
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1644 CAGCGTGGACAAGCTCTA 1661
> gi|1034574637|ref|XM_017018034.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X1, mRNA
Length=3878
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1647 CAGCGTGGACAAGCTCTA 1664
> gi|1034574645|ref|XM_017018038.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X5, mRNA
Length=7890
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1647 CAGCGTGGACAAGCTCTA 1664
> gi|1034574652|ref|XM_017018040.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X10, mRNA
Length=3732
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1501 CAGCGTGGACAAGCTCTA 1518
> gi|1034574648|ref|XM_011542926.2| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X7, mRNA
Length=3807
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1576 CAGCGTGGACAAGCTCTA 1593
> gi|1034574647|ref|XM_006718892.3| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X6, mRNA
Length=3810
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1579 CAGCGTGGACAAGCTCTA 1596
> gi|1034574643|ref|XM_017018037.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X4, mRNA
Length=8644
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 2413 CAGCGTGGACAAGCTCTA 2430
> gi|1034574649|ref|XM_017018039.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X8, mRNA
Length=3936
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1705 CAGCGTGGACAAGCTCTA 1722
> gi|1034574656|ref|XM_017018042.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X12, mRNA
Length=7936
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1705 CAGCGTGGACAAGCTCTA 1722
> gi|1034574654|ref|XM_017018041.1| PREDICTED: Homo sapiens GRAM
domain containing 1B (GRAMD1B), transcript variant X11, mRNA
Length=7948
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGCTCTA 18
|||| |||||||||||||
Sbjct 1705 CAGCGTGGACAAGCTCTA 1722
> gi|1034646574|ref|XM_017010002.1| PREDICTED: Homo sapiens PDZ
and LIM domain 4 (PDLIM4), transcript variant X1, mRNA
Length=2048
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 7 GGACAAGCTCTACC 20
||||||||||||||
Sbjct 640 GGACAAGCTCTACC 653
> gi|196162710|ref|NM_001131027.1| Homo sapiens PDZ and LIM domain
4 (PDLIM4), transcript variant 2, mRNA
Length=2189
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 7 GGACAAGCTCTACC 20
||||||||||||||
Sbjct 769 GGACAAGCTCTACC 782
> gi|196259777|ref|NM_003687.3| Homo sapiens PDZ and LIM domain
4 (PDLIM4), transcript variant 1, mRNA
Length=2307
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 7 GGACAAGCTCTACC 20
||||||||||||||
Sbjct 887 GGACAAGCTCTACC 900
> gi|548923747|ref|NM_001284426.1| Homo sapiens myosin VIIA and
Rab interacting protein (MYRIP), transcript variant 5, mRNA
Length=4667
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 550 CAGCCTGGACAAGC 563
> gi|767922900|ref|XM_011533575.1| PREDICTED: Homo sapiens myosin
VIIA and Rab interacting protein (MYRIP), transcript variant
X1, mRNA
Length=4994
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 901 CAGCCTGGACAAGC 914
> gi|548923695|ref|NM_001284425.1| Homo sapiens myosin VIIA and
Rab interacting protein (MYRIP), transcript variant 4, mRNA
Length=4909
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 792 CAGCCTGGACAAGC 805
> gi|548923930|ref|NM_001284424.1| Homo sapiens myosin VIIA and
Rab interacting protein (MYRIP), transcript variant 3, mRNA
Length=4851
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 929 CAGCCTGGACAAGC 942
> gi|548923958|ref|NR_104316.1| Homo sapiens myosin VIIA and Rab
interacting protein (MYRIP), transcript variant 6, non-coding
RNA
Length=5009
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 929 CAGCCTGGACAAGC 942
> gi|548923902|ref|NM_015460.3| Homo sapiens myosin VIIA and Rab
interacting protein (MYRIP), transcript variant 1, mRNA
Length=5046
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 929 CAGCCTGGACAAGC 942
> gi|548923750|ref|NM_001284423.1| Homo sapiens myosin VIIA and
Rab interacting protein (MYRIP), transcript variant 2, mRNA
Length=4857
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 740 CAGCCTGGACAAGC 753
> gi|1034558018|ref|XM_017001114.1| PREDICTED: Homo sapiens zinc
finger and BTB domain containing 48 (ZBTB48), transcript variant
X9, mRNA
Length=2156
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1539 CAGCCTGGACAAGC 1552
> gi|1034558014|ref|XM_017001112.1| PREDICTED: Homo sapiens zinc
finger and BTB domain containing 48 (ZBTB48), transcript variant
X7, mRNA
Length=2440
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1823 CAGCCTGGACAAGC 1836
> gi|1034558016|ref|XM_017001113.1| PREDICTED: Homo sapiens zinc
finger and BTB domain containing 48 (ZBTB48), transcript variant
X8, mRNA
Length=2381
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1764 CAGCCTGGACAAGC 1777
> gi|520975357|ref|NM_001278647.1| Homo sapiens zinc finger and
BTB domain containing 48 (ZBTB48), transcript variant 2, mRNA
Length=2278
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1646 CAGCCTGGACAAGC 1659
> gi|520975363|ref|NM_001278648.1| Homo sapiens zinc finger and
BTB domain containing 48 (ZBTB48), transcript variant 3, mRNA
Length=2299
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1667 CAGCCTGGACAAGC 1680
> gi|520975359|ref|NM_005341.3| Homo sapiens zinc finger and BTB
domain containing 48 (ZBTB48), transcript variant 1, mRNA
Length=2365
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 CAGCCTGGACAAGC 14
||||||||||||||
Sbjct 1733 CAGCCTGGACAAGC 1746
> gi|1034689826|ref|XR_001735859.1| PREDICTED: Homo sapiens uncharacterized
LOC105369219 (LOC105369219), transcript variant
X2, ncRNA
Length=3192
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 870 GCCTGGACAAGCTC 857
> gi|1034626213|ref|XR_937200.2| PREDICTED: Homo sapiens uncharacterized
LOC105369219 (LOC105369219), transcript variant X1,
ncRNA
Length=3108
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 787 GCCTGGACAAGCTC 774
> gi|209862795|ref|NM_017842.2| Homo sapiens solute carrier family
48 member 1 (SLC48A1), mRNA
Length=3034
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 2471 GCCTGGACAAGCTC 2458
> gi|1034580513|ref|XM_017019613.1| PREDICTED: Homo sapiens solute
carrier family 48 member 1 (SLC48A1), transcript variant
X2, mRNA
Length=3196
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 2635 GCCTGGACAAGCTC 2622
> gi|1034580519|ref|XM_017019616.1| PREDICTED: Homo sapiens solute
carrier family 48 member 1 (SLC48A1), transcript variant
X5, mRNA
Length=3049
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 2488 GCCTGGACAAGCTC 2475
> gi|1034580517|ref|XM_017019615.1| PREDICTED: Homo sapiens solute
carrier family 48 member 1 (SLC48A1), transcript variant
X4, mRNA
Length=3320
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 2759 GCCTGGACAAGCTC 2746
> gi|1034580511|ref|XM_017019612.1| PREDICTED: Homo sapiens solute
carrier family 48 member 1 (SLC48A1), transcript variant
X1, mRNA
Length=3268
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 2707 GCCTGGACAAGCTC 2694
> gi|1034580522|ref|XM_005269016.4| PREDICTED: Homo sapiens solute
carrier family 48 member 1 (SLC48A1), transcript variant
X7, mRNA
Length=3047
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 2486 GCCTGGACAAGCTC 2473
> gi|1034580515|ref|XM_017019614.1| PREDICTED: Homo sapiens solute
carrier family 48 member 1 (SLC48A1), transcript variant
X3, mRNA
Length=3197
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 2636 GCCTGGACAAGCTC 2623
> gi|209976984|ref|NM_032410.3| Homo sapiens hook microtubule-tethering
protein 3 (HOOK3), mRNA
Length=14460
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GCCTGGACAAGCTC 16
||||||||||||||
Sbjct 6295 GCCTGGACAAGCTC 6282
> gi|571026762|ref|NR_110113.1| Homo sapiens long intergenic non-protein
coding RNA 1103 (LINC01103), long non-coding RNA
Length=1471
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 7 GGACAAGCTCTACC 20
||||||||||||||
Sbjct 813 GGACAAGCTCTACC 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2337180340
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2