BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= ACTTTCTTCAGGGTCTTGTTC (evalue = 10)
Length=21
Score E
Sequences producing significant alignments: (Bits) Value
gi|442796430|ref|NM_014062.2| Homo sapiens NIN1/PSMD8 binding p... 42.1 6e-04
gi|442796465|ref|NR_074074.1| Homo sapiens NIN1/PSMD8 binding p... 42.1 6e-04
gi|613410231|ref|NM_032833.4| Homo sapiens protein phosphatase ... 32.2 0.59
gi|1034562694|ref|XM_005245551.4| PREDICTED: Homo sapiens prote... 32.2 0.59
gi|1034629267|ref|XM_017028891.1| PREDICTED: Homo sapiens RAN b... 30.2 2.3
gi|520975488|ref|NM_001278641.1| Homo sapiens RAN binding prote... 30.2 2.3
gi|1034629272|ref|XM_017028892.1| PREDICTED: Homo sapiens RAN b... 30.2 2.3
gi|1034629271|ref|XM_011530291.2| PREDICTED: Homo sapiens RAN b... 30.2 2.3
gi|520975483|ref|NM_001278640.1| Homo sapiens RAN binding prote... 30.2 2.3
gi|520975480|ref|NM_002882.3| Homo sapiens RAN binding protein ... 30.2 2.3
gi|1034629269|ref|XM_011530289.2| PREDICTED: Homo sapiens RAN b... 30.2 2.3
gi|1034629265|ref|XM_017028890.1| PREDICTED: Homo sapiens RAN b... 30.2 2.3
gi|1034629270|ref|XM_011530290.2| PREDICTED: Homo sapiens RAN b... 30.2 2.3
gi|520975476|ref|NM_001278639.1| Homo sapiens RAN binding prote... 30.2 2.3
gi|983904489|ref|NM_001319193.1| Homo sapiens Fas binding facto... 30.2 2.3
gi|1034599661|ref|XM_011523835.2| PREDICTED: Homo sapiens trans... 30.2 2.3
gi|1034599660|ref|XM_005256634.4| PREDICTED: Homo sapiens trans... 30.2 2.3
gi|1034599662|ref|XM_011523836.2| PREDICTED: Homo sapiens trans... 30.2 2.3
gi|51972201|ref|NM_001004313.1| Homo sapiens transmembrane prot... 30.2 2.3
gi|17402920|ref|NM_032642.2| Homo sapiens Wnt family member 5B ... 30.2 2.3
gi|17402918|ref|NM_030775.2| Homo sapiens Wnt family member 5B ... 30.2 2.3
gi|56237030|ref|NM_002419.3| Homo sapiens mitogen-activated pro... 30.2 2.3
gi|578821430|ref|XR_428915.1| PREDICTED: Homo sapiens mitogen-a... 30.2 2.3
gi|1034670438|ref|XR_001746326.1| PREDICTED: Homo sapiens aprat... 30.2 2.3
gi|1034670436|ref|XR_929277.2| PREDICTED: Homo sapiens aprataxi... 30.2 2.3
gi|1034670433|ref|XR_929276.2| PREDICTED: Homo sapiens aprataxi... 30.2 2.3
gi|1034670437|ref|XR_001746325.1| PREDICTED: Homo sapiens aprat... 30.2 2.3
gi|313760632|ref|NM_018384.4| Homo sapiens GTPase, IMAP family ... 30.2 2.3
gi|41393574|ref|NM_033214.2| Homo sapiens glycerol kinase 2 (GK... 30.2 2.3
gi|573459798|ref|NR_110285.1| Homo sapiens uncharacterized LOC1... 30.2 2.3
gi|1034686431|ref|XR_433406.2| PREDICTED: Homo sapiens uncharac... 28.2 9.2
gi|1034685907|ref|XR_916913.2| PREDICTED: Homo sapiens uncharac... 28.2 9.2
gi|1034689673|ref|XR_001744787.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1016080638|ref|NM_001322168.1| Homo sapiens killer cell immu... 28.2 9.2
gi|1034677530|ref|XR_430905.3| PREDICTED: Homo sapiens uncharac... 28.2 9.2
gi|1034677111|ref|XR_247456.2| PREDICTED: Homo sapiens uncharac... 28.2 9.2
gi|1034673407|ref|XM_017029233.1| PREDICTED: Homo sapiens strom... 28.2 9.2
gi|1034673402|ref|XM_005262360.2| PREDICTED: Homo sapiens strom... 28.2 9.2
gi|1034673411|ref|XM_006724728.3| PREDICTED: Homo sapiens strom... 28.2 9.2
gi|1034673399|ref|XM_005262359.3| PREDICTED: Homo sapiens strom... 28.2 9.2
gi|112789533|ref|NM_006603.4| Homo sapiens stromal antigen 2 (S... 28.2 9.2
gi|112789529|ref|NM_001042751.1| Homo sapiens stromal antigen 2... 28.2 9.2
gi|112789527|ref|NM_001042750.1| Homo sapiens stromal antigen 2... 28.2 9.2
gi|1034673409|ref|XM_017029234.1| PREDICTED: Homo sapiens strom... 28.2 9.2
gi|1034673405|ref|XM_017029232.1| PREDICTED: Homo sapiens strom... 28.2 9.2
gi|1034673403|ref|XM_011531253.2| PREDICTED: Homo sapiens strom... 28.2 9.2
gi|1034673401|ref|XM_005262358.2| PREDICTED: Homo sapiens strom... 28.2 9.2
gi|578838602|ref|XM_006724727.1| PREDICTED: Homo sapiens stroma... 28.2 9.2
gi|539846357|ref|NM_001282418.1| Homo sapiens stromal antigen 2... 28.2 9.2
gi|1034673412|ref|XM_017029235.1| PREDICTED: Homo sapiens strom... 28.2 9.2
gi|1034673404|ref|XM_005262361.2| PREDICTED: Homo sapiens strom... 28.2 9.2
gi|1034673400|ref|XM_005262357.2| PREDICTED: Homo sapiens strom... 28.2 9.2
gi|539846302|ref|NM_001042749.2| Homo sapiens stromal antigen 2... 28.2 9.2
gi|134268643|ref|NM_013289.2| Homo sapiens killer cell immunogl... 28.2 9.2
gi|1034606005|ref|XM_017026232.1| PREDICTED: Homo sapiens cytoc... 28.2 9.2
gi|119220565|ref|NM_007253.3| Homo sapiens cytochrome P450 fami... 28.2 9.2
gi|1034606776|ref|XM_005272462.4| PREDICTED: Homo sapiens Fc fr... 28.2 9.2
gi|334085204|ref|NM_001207019.2| Homo sapiens Fc fragment of Ig... 28.2 9.2
gi|334085202|ref|NM_001220500.1| Homo sapiens Fc fragment of Ig... 28.2 9.2
gi|221136804|ref|NM_002002.4| Homo sapiens Fc fragment of IgE r... 28.2 9.2
gi|1034603303|ref|XR_429986.2| PREDICTED: Homo sapiens uncharac... 28.2 9.2
gi|530788327|ref|NM_001282131.1| Homo sapiens slingshot protein... 28.2 9.2
gi|530788325|ref|NM_001282130.1| Homo sapiens slingshot protein... 28.2 9.2
gi|1034601818|ref|XM_017025255.1| PREDICTED: Homo sapiens sling... 28.2 9.2
gi|1034601814|ref|XM_017025253.1| PREDICTED: Homo sapiens sling... 28.2 9.2
gi|1034601816|ref|XM_017025254.1| PREDICTED: Homo sapiens sling... 28.2 9.2
gi|1034601806|ref|XM_005258059.2| PREDICTED: Homo sapiens sling... 28.2 9.2
gi|1034601807|ref|XM_011525404.2| PREDICTED: Homo sapiens sling... 28.2 9.2
gi|1034601808|ref|XM_006722149.3| PREDICTED: Homo sapiens sling... 28.2 9.2
gi|1034601809|ref|XM_011525405.2| PREDICTED: Homo sapiens sling... 28.2 9.2
gi|1034601810|ref|XM_011525406.2| PREDICTED: Homo sapiens sling... 28.2 9.2
gi|767996296|ref|XM_011525407.1| PREDICTED: Homo sapiens slings... 28.2 9.2
gi|1034601805|ref|XM_011525402.2| PREDICTED: Homo sapiens sling... 28.2 9.2
gi|530788324|ref|NM_033389.3| Homo sapiens slingshot protein ph... 28.2 9.2
gi|1034601803|ref|XM_017025251.1| PREDICTED: Homo sapiens sling... 28.2 9.2
gi|530788322|ref|NM_001282129.1| Homo sapiens slingshot protein... 28.2 9.2
gi|767996284|ref|XM_005258058.3| PREDICTED: Homo sapiens slings... 28.2 9.2
gi|1034596971|ref|XR_933101.2| PREDICTED: Homo sapiens uncharac... 28.2 9.2
gi|94400918|ref|NM_145294.4| Homo sapiens WD repeat domain 90 (... 28.2 9.2
gi|1034593900|ref|XM_017023023.1| PREDICTED: Homo sapiens WD re... 28.2 9.2
gi|254039589|ref|NM_001130448.2| Homo sapiens chromosome 15 ope... 28.2 9.2
gi|1034578794|ref|XM_011538082.2| PREDICTED: Homo sapiens media... 28.2 9.2
gi|300360584|ref|NM_015335.4| Homo sapiens mediator complex sub... 28.2 9.2
gi|1034578792|ref|XM_011538080.2| PREDICTED: Homo sapiens media... 28.2 9.2
gi|1034578793|ref|XM_011538081.2| PREDICTED: Homo sapiens media... 28.2 9.2
gi|1034578795|ref|XM_017019090.1| PREDICTED: Homo sapiens media... 28.2 9.2
gi|767973401|ref|XM_011537999.1| PREDICTED: Homo sapiens coiled... 28.2 9.2
gi|767973407|ref|XM_006719263.2| PREDICTED: Homo sapiens coiled... 28.2 9.2
gi|578823375|ref|XM_006719262.1| PREDICTED: Homo sapiens coiled... 28.2 9.2
gi|555943731|ref|NM_001286244.1| Homo sapiens coiled-coil domai... 28.2 9.2
gi|555943705|ref|NM_001286243.1| Homo sapiens coiled-coil domai... 28.2 9.2
gi|555943737|ref|NM_152591.2| Homo sapiens coiled-coil domain c... 28.2 9.2
gi|1034578307|ref|XM_011538001.2| PREDICTED: Homo sapiens coile... 28.2 9.2
gi|385251405|ref|NM_002108.3| Homo sapiens histidine ammonia-ly... 28.2 9.2
gi|385251410|ref|NM_001258334.1| Homo sapiens histidine ammonia... 28.2 9.2
gi|385251406|ref|NM_001258333.1| Homo sapiens histidine ammonia... 28.2 9.2
gi|1034578060|ref|XM_017018839.1| PREDICTED: Homo sapiens prick... 28.2 9.2
gi|1034578058|ref|XM_017018838.1| PREDICTED: Homo sapiens prick... 28.2 9.2
gi|767973276|ref|XM_011537946.1| PREDICTED: Homo sapiens prickl... 28.2 9.2
gi|1034578062|ref|XM_017018840.1| PREDICTED: Homo sapiens prick... 28.2 9.2
gi|1034578064|ref|XM_011537947.2| PREDICTED: Homo sapiens prick... 28.2 9.2
gi|222136679|ref|NM_001144881.1| Homo sapiens prickle planar ce... 28.2 9.2
gi|222136681|ref|NM_001144882.1| Homo sapiens prickle planar ce... 28.2 9.2
gi|222136683|ref|NM_001144883.1| Homo sapiens prickle planar ce... 28.2 9.2
gi|222136677|ref|NM_153026.2| Homo sapiens prickle planar cell ... 28.2 9.2
gi|182507166|ref|NM_022455.4| Homo sapiens nuclear receptor bin... 28.2 9.2
gi|1034644359|ref|XM_017009277.1| PREDICTED: Homo sapiens WW an... 28.2 9.2
gi|1034644361|ref|XM_017009278.1| PREDICTED: Homo sapiens WW an... 28.2 9.2
gi|1034644358|ref|XM_005265853.2| PREDICTED: Homo sapiens WW an... 28.2 9.2
gi|530380922|ref|XM_005265850.1| PREDICTED: Homo sapiens WW and... 28.2 9.2
gi|1034644356|ref|XM_017009276.1| PREDICTED: Homo sapiens WW an... 28.2 9.2
gi|767938217|ref|XM_011534491.1| PREDICTED: Homo sapiens WW and... 28.2 9.2
gi|767938213|ref|XM_011534489.1| PREDICTED: Homo sapiens WW and... 28.2 9.2
gi|767938209|ref|XM_011534487.1| PREDICTED: Homo sapiens WW and... 28.2 9.2
gi|767938215|ref|XM_011534490.1| PREDICTED: Homo sapiens WW and... 28.2 9.2
gi|767938211|ref|XM_011534488.1| PREDICTED: Homo sapiens WW and... 28.2 9.2
gi|767938207|ref|XM_011534486.1| PREDICTED: Homo sapiens WW and... 28.2 9.2
gi|767938205|ref|XM_011534485.1| PREDICTED: Homo sapiens WW and... 28.2 9.2
gi|242247262|ref|NM_015238.2| Homo sapiens WW and C2 domain con... 28.2 9.2
gi|242247256|ref|NM_001161662.1| Homo sapiens WW and C2 domain ... 28.2 9.2
gi|242247250|ref|NM_001161661.1| Homo sapiens WW and C2 domain ... 28.2 9.2
gi|1034644708|ref|XM_005271972.4| PREDICTED: Homo sapiens sorti... 28.2 9.2
gi|1034644709|ref|XM_011543350.2| PREDICTED: Homo sapiens sorti... 28.2 9.2
gi|1034644707|ref|XM_011543349.2| PREDICTED: Homo sapiens sorti... 28.2 9.2
gi|1034644710|ref|XM_006714592.3| PREDICTED: Homo sapiens sorti... 28.2 9.2
gi|767935889|ref|XM_011543390.1| PREDICTED: Homo sapiens arylsu... 28.2 9.2
gi|158634485|ref|NM_000046.3| Homo sapiens arylsulfatase B (ARS... 28.2 9.2
gi|1034634336|ref|XM_017006786.1| PREDICTED: Homo sapiens SET d... 28.2 9.2
gi|1034634334|ref|XM_017006785.1| PREDICTED: Homo sapiens SET d... 28.2 9.2
gi|1034634331|ref|XM_017006784.1| PREDICTED: Homo sapiens SET d... 28.2 9.2
gi|1034634327|ref|XM_017006782.1| PREDICTED: Homo sapiens SET d... 28.2 9.2
gi|1034634297|ref|XM_017006767.1| PREDICTED: Homo sapiens SET d... 28.2 9.2
gi|1034634313|ref|XM_017006775.1| PREDICTED: Homo sapiens SET d... 28.2 9.2
gi|1034634309|ref|XM_017006773.1| PREDICTED: Homo sapiens SET d... 28.2 9.2
gi|1034634307|ref|XM_017006772.1| PREDICTED: Homo sapiens SET d... 28.2 9.2
gi|1034634301|ref|XM_017006769.1| PREDICTED: Homo sapiens SET d... 28.2 9.2
gi|1034634303|ref|XM_017006770.1| PREDICTED: Homo sapiens SET d... 28.2 9.2
gi|1034634333|ref|XR_001740195.1| PREDICTED: Homo sapiens SET d... 28.2 9.2
gi|1034618315|ref|XR_001739169.1| PREDICTED: Homo sapiens uncha... 28.2 9.2
gi|1007399303|ref|NR_135526.1| Homo sapiens uncharacterized LOC... 28.2 9.2
gi|318037621|ref|NM_001200051.1| Homo sapiens N-acetylneuramina... 28.2 9.2
gi|318037615|ref|NM_001200052.1| Homo sapiens N-acetylneuramina... 28.2 9.2
gi|318037608|ref|NM_001200056.1| Homo sapiens N-acetylneuramina... 28.2 9.2
gi|318037612|ref|NM_030769.2| Homo sapiens N-acetylneuraminate ... 28.2 9.2
> gi|442796430|ref|NM_014062.2| Homo sapiens NIN1/PSMD8 binding
protein 1 homolog (NOB1), transcript variant 1, mRNA
Length=1775
Score = 42.1 bits (21), Expect = 6e-04
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGTCTTGTTC 21
|||||||||||||||||||||
Sbjct 945 ACTTTCTTCAGGGTCTTGTTC 925
> gi|442796465|ref|NR_074074.1| Homo sapiens NIN1/PSMD8 binding
protein 1 homolog (NOB1), transcript variant 2, non-coding
RNA
Length=1644
Score = 42.1 bits (21), Expect = 6e-04
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGTCTTGTTC 21
|||||||||||||||||||||
Sbjct 814 ACTTTCTTCAGGGTCTTGTTC 794
> gi|613410231|ref|NM_032833.4| Homo sapiens protein phosphatase
1 regulatory subunit 15B (PPP1R15B), mRNA
Length=5276
Score = 32.2 bits (16), Expect = 0.59
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 6 CTTCAGGGTCTTGTTC 21
||||||||||||||||
Sbjct 1826 CTTCAGGGTCTTGTTC 1811
> gi|1034562694|ref|XM_005245551.4| PREDICTED: Homo sapiens protein
phosphatase 1 regulatory subunit 15B (PPP1R15B), transcript
variant X1, mRNA
Length=3393
Score = 32.2 bits (16), Expect = 0.59
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Minus
Query 6 CTTCAGGGTCTTGTTC 21
||||||||||||||||
Sbjct 1889 CTTCAGGGTCTTGTTC 1874
> gi|1034629267|ref|XM_017028891.1| PREDICTED: Homo sapiens RAN
binding protein 1 (RANBP1), transcript variant X2, mRNA
Length=1832
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 633 TCTTCAGGGTCTTGT 619
> gi|520975488|ref|NM_001278641.1| Homo sapiens RAN binding protein
1 (RANBP1), transcript variant 4, mRNA
Length=1254
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 638 TCTTCAGGGTCTTGT 624
> gi|1034629272|ref|XM_017028892.1| PREDICTED: Homo sapiens RAN
binding protein 1 (RANBP1), transcript variant X6, mRNA
Length=1037
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 424 TCTTCAGGGTCTTGT 410
> gi|1034629271|ref|XM_011530291.2| PREDICTED: Homo sapiens RAN
binding protein 1 (RANBP1), transcript variant X5, mRNA
Length=1448
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 832 TCTTCAGGGTCTTGT 818
> gi|520975483|ref|NM_001278640.1| Homo sapiens RAN binding protein
1 (RANBP1), transcript variant 3, mRNA
Length=1134
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 518 TCTTCAGGGTCTTGT 504
> gi|520975480|ref|NM_002882.3| Homo sapiens RAN binding protein
1 (RANBP1), transcript variant 2, mRNA
Length=1137
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 518 TCTTCAGGGTCTTGT 504
> gi|1034629269|ref|XM_011530289.2| PREDICTED: Homo sapiens RAN
binding protein 1 (RANBP1), transcript variant X3, mRNA
Length=1528
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 540 TCTTCAGGGTCTTGT 526
> gi|1034629265|ref|XM_017028890.1| PREDICTED: Homo sapiens RAN
binding protein 1 (RANBP1), transcript variant X1, mRNA
Length=1739
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 540 TCTTCAGGGTCTTGT 526
> gi|1034629270|ref|XM_011530290.2| PREDICTED: Homo sapiens RAN
binding protein 1 (RANBP1), transcript variant X4, mRNA
Length=1620
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 554 TCTTCAGGGTCTTGT 540
> gi|520975476|ref|NM_001278639.1| Homo sapiens RAN binding protein
1 (RANBP1), transcript variant 1, mRNA
Length=1389
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 770 TCTTCAGGGTCTTGT 756
> gi|983904489|ref|NM_001319193.1| Homo sapiens Fas binding factor
1 (FBF1), mRNA
Length=4696
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCT 16
|||||||||||||||
Sbjct 3498 CTTTCTTCAGGGTCT 3484
> gi|1034599661|ref|XM_011523835.2| PREDICTED: Homo sapiens transmembrane
protein 220 (TMEM220), transcript variant X4, mRNA
Length=1813
Score = 30.2 bits (15), Expect = 2.3
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGTCTTGT 19
||||||| |||||||||||
Sbjct 642 ACTTTCTGCAGGGTCTTGT 660
> gi|1034599660|ref|XM_005256634.4| PREDICTED: Homo sapiens transmembrane
protein 220 (TMEM220), transcript variant X3, mRNA
Length=2264
Score = 30.2 bits (15), Expect = 2.3
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGTCTTGT 19
||||||| |||||||||||
Sbjct 1093 ACTTTCTGCAGGGTCTTGT 1111
> gi|1034599662|ref|XM_011523836.2| PREDICTED: Homo sapiens transmembrane
protein 220 (TMEM220), transcript variant X5, mRNA
Length=2205
Score = 30.2 bits (15), Expect = 2.3
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGTCTTGT 19
||||||| |||||||||||
Sbjct 1034 ACTTTCTGCAGGGTCTTGT 1052
> gi|51972201|ref|NM_001004313.1| Homo sapiens transmembrane protein
220 (TMEM220), mRNA
Length=3092
Score = 30.2 bits (15), Expect = 2.3
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGTCTTGT 19
||||||| |||||||||||
Sbjct 1158 ACTTTCTGCAGGGTCTTGT 1176
> gi|17402920|ref|NM_032642.2| Homo sapiens Wnt family member 5B
(WNT5B), transcript variant 1, mRNA
Length=2251
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 1700 TCTTCAGGGTCTTGT 1714
> gi|17402918|ref|NM_030775.2| Homo sapiens Wnt family member 5B
(WNT5B), transcript variant 2, mRNA
Length=2184
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 1662 TCTTCAGGGTCTTGT 1676
> gi|56237030|ref|NM_002419.3| Homo sapiens mitogen-activated protein
kinase kinase kinase 11 (MAP3K11), mRNA
Length=3574
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 1286 TCTTCAGGGTCTTGT 1272
> gi|578821430|ref|XR_428915.1| PREDICTED: Homo sapiens mitogen-activated
protein kinase kinase kinase 11 (MAP3K11), transcript
variant X1, misc_RNA
Length=3712
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTGT 19
|||||||||||||||
Sbjct 1375 TCTTCAGGGTCTTGT 1361
> gi|1034670438|ref|XR_001746326.1| PREDICTED: Homo sapiens aprataxin
(APTX), transcript variant X12, misc_RNA
Length=1610
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCTT 17
|||||||||||||||
Sbjct 1142 TTTCTTCAGGGTCTT 1128
> gi|1034670436|ref|XR_929277.2| PREDICTED: Homo sapiens aprataxin
(APTX), transcript variant X10, misc_RNA
Length=1625
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCTT 17
|||||||||||||||
Sbjct 1157 TTTCTTCAGGGTCTT 1143
> gi|1034670433|ref|XR_929276.2| PREDICTED: Homo sapiens aprataxin
(APTX), transcript variant X8, misc_RNA
Length=1602
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCTT 17
|||||||||||||||
Sbjct 1134 TTTCTTCAGGGTCTT 1120
> gi|1034670437|ref|XR_001746325.1| PREDICTED: Homo sapiens aprataxin
(APTX), transcript variant X11, misc_RNA
Length=2424
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCTT 17
|||||||||||||||
Sbjct 1157 TTTCTTCAGGGTCTT 1143
> gi|313760632|ref|NM_018384.4| Homo sapiens GTPase, IMAP family
member 5 (GIMAP5), mRNA
Length=1895
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 7 TTCAGGGTCTTGTTC 21
|||||||||||||||
Sbjct 54 TTCAGGGTCTTGTTC 68
> gi|41393574|ref|NM_033214.2| Homo sapiens glycerol kinase 2 (GK2),
mRNA
Length=1899
Score = 30.2 bits (15), Expect = 2.3
Identities = 18/19 (95%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCTTGTTC 21
|||||| ||||||||||||
Sbjct 196 TTTCTTTAGGGTCTTGTTC 178
> gi|573459798|ref|NR_110285.1| Homo sapiens uncharacterized LOC101927924
(LOC101927924), long non-coding RNA
Length=2398
Score = 30.2 bits (15), Expect = 2.3
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCT 16
|||||||||||||||
Sbjct 1924 CTTTCTTCAGGGTCT 1910
> gi|1034686431|ref|XR_433406.2| PREDICTED: Homo sapiens uncharacterized
LOC101929777 (LOC101929777), transcript variant X3,
ncRNA
Length=709
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 283 CTTTCTTCAGGGTC 270
> gi|1034685907|ref|XR_916913.2| PREDICTED: Homo sapiens uncharacterized
LOC105371093 (LOC105371093), ncRNA
Length=930
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 TTTCTTCAGGGTCTTGTT 20
|||| |||||||||||||
Sbjct 718 TTTCCTCAGGGTCTTGTT 735
> gi|1034689673|ref|XR_001744787.1| PREDICTED: Homo sapiens uncharacterized
LOC101928278 (LOC101928278), transcript variant
X1, ncRNA
Length=13039
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 4287 CTTTCTTCAGGGTC 4300
> gi|1016080638|ref|NM_001322168.1| Homo sapiens killer cell immunoglobulin
like receptor, three Ig domains and long cytoplasmic
tail 1 (KIR3DL1), transcript variant 2 (alternate allele),
mRNA
Length=1986
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 TCAGGGTCTTGTTC 21
||||||||||||||
Sbjct 1244 TCAGGGTCTTGTTC 1231
> gi|1034677530|ref|XR_430905.3| PREDICTED: Homo sapiens uncharacterized
LOC101929777 (LOC101929777), transcript variant X2,
ncRNA
Length=404
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 283 CTTTCTTCAGGGTC 270
> gi|1034677111|ref|XR_247456.2| PREDICTED: Homo sapiens uncharacterized
LOC101929777 (LOC101929777), transcript variant X1,
ncRNA
Length=709
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 283 CTTTCTTCAGGGTC 270
> gi|1034673407|ref|XM_017029233.1| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X9, mRNA
Length=4754
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4308 ACTTTCTTCAGGGT 4295
> gi|1034673402|ref|XM_005262360.2| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X5, mRNA
Length=4880
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4419 ACTTTCTTCAGGGT 4406
> gi|1034673411|ref|XM_006724728.3| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X11, mRNA
Length=5074
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4613 ACTTTCTTCAGGGT 4600
> gi|1034673399|ref|XM_005262359.3| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X1, mRNA
Length=5937
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4490 ACTTTCTTCAGGGT 4477
> gi|112789533|ref|NM_006603.4| Homo sapiens stromal antigen 2
(STAG2), transcript variant 4, mRNA
Length=6010
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4399 ACTTTCTTCAGGGT 4386
> gi|112789529|ref|NM_001042751.1| Homo sapiens stromal antigen
2 (STAG2), transcript variant 3, mRNA
Length=6075
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4464 ACTTTCTTCAGGGT 4451
> gi|112789527|ref|NM_001042750.1| Homo sapiens stromal antigen
2 (STAG2), transcript variant 2, mRNA
Length=6186
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4575 ACTTTCTTCAGGGT 4562
> gi|1034673409|ref|XM_017029234.1| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X10, mRNA
Length=4807
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4361 ACTTTCTTCAGGGT 4348
> gi|1034673405|ref|XM_017029232.1| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X8, mRNA
Length=4872
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4426 ACTTTCTTCAGGGT 4413
> gi|1034673403|ref|XM_011531253.2| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X6, mRNA
Length=4933
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4472 ACTTTCTTCAGGGT 4459
> gi|1034673401|ref|XM_005262358.2| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X4, mRNA
Length=4998
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4537 ACTTTCTTCAGGGT 4524
> gi|578838602|ref|XM_006724727.1| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X2, mRNA
Length=6126
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4679 ACTTTCTTCAGGGT 4666
> gi|539846357|ref|NM_001282418.1| Homo sapiens stromal antigen
2 (STAG2), transcript variant 5, mRNA
Length=6054
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4443 ACTTTCTTCAGGGT 4430
> gi|1034673412|ref|XM_017029235.1| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X12, mRNA
Length=5079
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4618 ACTTTCTTCAGGGT 4605
> gi|1034673404|ref|XM_005262361.2| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X7, mRNA
Length=4882
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4436 ACTTTCTTCAGGGT 4423
> gi|1034673400|ref|XM_005262357.2| PREDICTED: Homo sapiens stromal
antigen 2 (STAG2), transcript variant X3, mRNA
Length=5061
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4600 ACTTTCTTCAGGGT 4587
> gi|539846302|ref|NM_001042749.2| Homo sapiens stromal antigen
2 (STAG2), transcript variant 1, mRNA
Length=6342
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4731 ACTTTCTTCAGGGT 4718
> gi|134268643|ref|NM_013289.2| Homo sapiens killer cell immunoglobulin
like receptor, three Ig domains and long cytoplasmic
tail 1 (KIR3DL1), transcript variant 1 (reference allele),
mRNA
Length=1986
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 8 TCAGGGTCTTGTTC 21
||||||||||||||
Sbjct 1244 TCAGGGTCTTGTTC 1231
> gi|1034606005|ref|XM_017026232.1| PREDICTED: Homo sapiens cytochrome
P450 family 4 subfamily F member 8 (CYP4F8), transcript
variant X1, mRNA
Length=1322
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 CTTCAGGGTCTTGT 19
||||||||||||||
Sbjct 388 CTTCAGGGTCTTGT 375
> gi|119220565|ref|NM_007253.3| Homo sapiens cytochrome P450 family
4 subfamily F member 8 (CYP4F8), mRNA
Length=1907
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 CTTCAGGGTCTTGT 19
||||||||||||||
Sbjct 451 CTTCAGGGTCTTGT 438
> gi|1034606776|ref|XM_005272462.4| PREDICTED: Homo sapiens Fc
fragment of IgE receptor II (FCER2), transcript variant X1,
mRNA
Length=2218
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 1822 TCTTCAGGGTCTTG 1809
> gi|334085204|ref|NM_001207019.2| Homo sapiens Fc fragment of
IgE receptor II (FCER2), transcript variant 2, mRNA
Length=1488
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 1085 TCTTCAGGGTCTTG 1072
> gi|334085202|ref|NM_001220500.1| Homo sapiens Fc fragment of
IgE receptor II (FCER2), transcript variant 3, mRNA
Length=1624
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 1221 TCTTCAGGGTCTTG 1208
> gi|221136804|ref|NM_002002.4| Homo sapiens Fc fragment of IgE
receptor II (FCER2), transcript variant 1, mRNA
Length=1620
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 1217 TCTTCAGGGTCTTG 1204
> gi|1034603303|ref|XR_429986.2| PREDICTED: Homo sapiens uncharacterized
LOC101929777 (LOC101929777), transcript variant X1,
ncRNA
Length=709
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 283 CTTTCTTCAGGGTC 270
> gi|530788327|ref|NM_001282131.1| Homo sapiens slingshot protein
phosphatase 2 (SSH2), transcript variant 4, mRNA
Length=972
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 538 CTTTCTTCAGTGTCTTGT 521
> gi|530788325|ref|NM_001282130.1| Homo sapiens slingshot protein
phosphatase 2 (SSH2), transcript variant 3, mRNA
Length=1024
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 590 CTTTCTTCAGTGTCTTGT 573
> gi|1034601818|ref|XM_017025255.1| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X14,
mRNA
Length=1032
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 610 CTTTCTTCAGTGTCTTGT 593
> gi|1034601814|ref|XM_017025253.1| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X12,
mRNA
Length=1814
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 610 CTTTCTTCAGTGTCTTGT 593
> gi|1034601816|ref|XM_017025254.1| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X13,
mRNA
Length=1687
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 610 CTTTCTTCAGTGTCTTGT 593
> gi|1034601806|ref|XM_005258059.2| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X4,
mRNA
Length=7715
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 538 CTTTCTTCAGTGTCTTGT 521
> gi|1034601807|ref|XM_011525404.2| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X5,
mRNA
Length=9975
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 1162 CTTTCTTCAGTGTCTTGT 1145
> gi|1034601808|ref|XM_006722149.3| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X6,
mRNA
Length=12982
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 4169 CTTTCTTCAGTGTCTTGT 4152
> gi|1034601809|ref|XM_011525405.2| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X7,
mRNA
Length=10023
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 1210 CTTTCTTCAGTGTCTTGT 1193
> gi|1034601810|ref|XM_011525406.2| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X8,
mRNA
Length=9302
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 489 CTTTCTTCAGTGTCTTGT 472
> gi|767996296|ref|XM_011525407.1| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X9, mRNA
Length=9047
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 234 CTTTCTTCAGTGTCTTGT 217
> gi|1034601805|ref|XM_011525402.2| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X3,
mRNA
Length=9212
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 399 CTTTCTTCAGTGTCTTGT 382
> gi|530788324|ref|NM_033389.3| Homo sapiens slingshot protein
phosphatase 2 (SSH2), transcript variant 2, mRNA
Length=9224
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 402 CTTTCTTCAGTGTCTTGT 385
> gi|1034601803|ref|XM_017025251.1| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X2,
mRNA
Length=9420
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 610 CTTTCTTCAGTGTCTTGT 593
> gi|530788322|ref|NM_001282129.1| Homo sapiens slingshot protein
phosphatase 2 (SSH2), transcript variant 1, mRNA
Length=9493
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 671 CTTTCTTCAGTGTCTTGT 654
> gi|767996284|ref|XM_005258058.3| PREDICTED: Homo sapiens slingshot
protein phosphatase 2 (SSH2), transcript variant X1, mRNA
Length=9377
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTCTTGT 19
|||||||||| |||||||
Sbjct 564 CTTTCTTCAGTGTCTTGT 547
> gi|1034596971|ref|XR_933101.2| PREDICTED: Homo sapiens uncharacterized
LOC105371093 (LOC105371093), ncRNA
Length=930
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 3 TTTCTTCAGGGTCTTGTT 20
|||| |||||||||||||
Sbjct 718 TTTCCTCAGGGTCTTGTT 735
> gi|94400918|ref|NM_145294.4| Homo sapiens WD repeat domain 90
(WDR90), mRNA
Length=5541
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 CTTCAGGGTCTTGT 19
||||||||||||||
Sbjct 171 CTTCAGGGTCTTGT 158
> gi|1034593900|ref|XM_017023023.1| PREDICTED: Homo sapiens WD
repeat domain 90 (WDR90), transcript variant X1, mRNA
Length=5815
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 6 CTTCAGGGTCTTGT 19
||||||||||||||
Sbjct 171 CTTCAGGGTCTTGT 158
> gi|254039589|ref|NM_001130448.2| Homo sapiens chromosome 15 open
reading frame 62 (C15orf62), mRNA
Length=2503
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 1332 CTTTCTTCAGGGTC 1319
> gi|1034578794|ref|XM_011538082.2| PREDICTED: Homo sapiens mediator
complex subunit 13 like (MED13L), transcript variant X3,
mRNA
Length=9617
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGTCTTG 18
||||||||||||| ||||
Sbjct 4564 ACTTTCTTCAGGGACTTG 4581
> gi|300360584|ref|NM_015335.4| Homo sapiens mediator complex subunit
13 like (MED13L), mRNA
Length=9393
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGTCTTG 18
||||||||||||| ||||
Sbjct 4361 ACTTTCTTCAGGGACTTG 4378
> gi|1034578792|ref|XM_011538080.2| PREDICTED: Homo sapiens mediator
complex subunit 13 like (MED13L), transcript variant X1,
mRNA
Length=9447
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGTCTTG 18
||||||||||||| ||||
Sbjct 4394 ACTTTCTTCAGGGACTTG 4411
> gi|1034578793|ref|XM_011538081.2| PREDICTED: Homo sapiens mediator
complex subunit 13 like (MED13L), transcript variant X2,
mRNA
Length=9444
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGTCTTG 18
||||||||||||| ||||
Sbjct 4391 ACTTTCTTCAGGGACTTG 4408
> gi|1034578795|ref|XM_017019090.1| PREDICTED: Homo sapiens mediator
complex subunit 13 like (MED13L), transcript variant X4,
mRNA
Length=9408
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGTCTTG 18
||||||||||||| ||||
Sbjct 4391 ACTTTCTTCAGGGACTTG 4408
> gi|767973401|ref|XM_011537999.1| PREDICTED: Homo sapiens coiled-coil
domain containing 63 (CCDC63), transcript variant X2,
mRNA
Length=2236
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 687 TCTTCAGGGTCTTG 674
> gi|767973407|ref|XM_006719263.2| PREDICTED: Homo sapiens coiled-coil
domain containing 63 (CCDC63), transcript variant X4,
mRNA
Length=1920
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 397 TCTTCAGGGTCTTG 384
> gi|578823375|ref|XM_006719262.1| PREDICTED: Homo sapiens coiled-coil
domain containing 63 (CCDC63), transcript variant X1,
mRNA
Length=2185
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 636 TCTTCAGGGTCTTG 623
> gi|555943731|ref|NM_001286244.1| Homo sapiens coiled-coil domain
containing 63 (CCDC63), transcript variant 3, mRNA
Length=1745
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 169 TCTTCAGGGTCTTG 156
> gi|555943705|ref|NM_001286243.1| Homo sapiens coiled-coil domain
containing 63 (CCDC63), transcript variant 2, mRNA
Length=1915
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 339 TCTTCAGGGTCTTG 326
> gi|555943737|ref|NM_152591.2| Homo sapiens coiled-coil domain
containing 63 (CCDC63), transcript variant 1, mRNA
Length=2020
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 444 TCTTCAGGGTCTTG 431
> gi|1034578307|ref|XM_011538001.2| PREDICTED: Homo sapiens coiled-coil
domain containing 63 (CCDC63), transcript variant X3,
mRNA
Length=2228
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 679 TCTTCAGGGTCTTG 666
> gi|385251405|ref|NM_002108.3| Homo sapiens histidine ammonia-lyase
(HAL), transcript variant 1, mRNA
Length=3927
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 120 CTTTCTTCAGGGTC 107
> gi|385251410|ref|NM_001258334.1| Homo sapiens histidine ammonia-lyase
(HAL), transcript variant 3, mRNA
Length=3857
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 120 CTTTCTTCAGGGTC 107
> gi|385251406|ref|NM_001258333.1| Homo sapiens histidine ammonia-lyase
(HAL), transcript variant 2, mRNA
Length=3860
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 120 CTTTCTTCAGGGTC 107
> gi|1034578060|ref|XM_017018839.1| PREDICTED: Homo sapiens prickle
planar cell polarity protein 1 (PRICKLE1), transcript variant
X3, mRNA
Length=4305
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 1571 TTCTTCAGGGTCTT 1558
> gi|1034578058|ref|XM_017018838.1| PREDICTED: Homo sapiens prickle
planar cell polarity protein 1 (PRICKLE1), transcript variant
X1, mRNA
Length=4105
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 1371 TTCTTCAGGGTCTT 1358
> gi|767973276|ref|XM_011537946.1| PREDICTED: Homo sapiens prickle
planar cell polarity protein 1 (PRICKLE1), transcript variant
X2, mRNA
Length=4060
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 1326 TTCTTCAGGGTCTT 1313
> gi|1034578062|ref|XM_017018840.1| PREDICTED: Homo sapiens prickle
planar cell polarity protein 1 (PRICKLE1), transcript variant
X4, mRNA
Length=4125
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 1391 TTCTTCAGGGTCTT 1378
> gi|1034578064|ref|XM_011537947.2| PREDICTED: Homo sapiens prickle
planar cell polarity protein 1 (PRICKLE1), transcript variant
X5, mRNA
Length=4291
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 1557 TTCTTCAGGGTCTT 1544
> gi|222136679|ref|NM_001144881.1| Homo sapiens prickle planar
cell polarity protein 1 (PRICKLE1), transcript variant 2, mRNA
Length=4254
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 1508 TTCTTCAGGGTCTT 1495
> gi|222136681|ref|NM_001144882.1| Homo sapiens prickle planar
cell polarity protein 1 (PRICKLE1), transcript variant 3, mRNA
Length=4253
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 1507 TTCTTCAGGGTCTT 1494
> gi|222136683|ref|NM_001144883.1| Homo sapiens prickle planar
cell polarity protein 1 (PRICKLE1), transcript variant 4, mRNA
Length=4250
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 1504 TTCTTCAGGGTCTT 1491
> gi|222136677|ref|NM_153026.2| Homo sapiens prickle planar cell
polarity protein 1 (PRICKLE1), transcript variant 1, mRNA
Length=4321
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 1575 TTCTTCAGGGTCTT 1562
> gi|182507166|ref|NM_022455.4| Homo sapiens nuclear receptor binding
SET domain protein 1 (NSD1), transcript variant 2, mRNA
Length=12998
Score = 28.2 bits (14), Expect = 9.2
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 1 ACTTTCTTCAGGGTCTTG 18
||||| ||||||||||||
Sbjct 447 ACTTTTTTCAGGGTCTTG 430
> gi|1034644359|ref|XM_017009277.1| PREDICTED: Homo sapiens WW
and C2 domain containing 1 (WWC1), transcript variant X11, mRNA
Length=4713
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 1004 TTTCTTCAGGGTCT 991
> gi|1034644361|ref|XM_017009278.1| PREDICTED: Homo sapiens WW
and C2 domain containing 1 (WWC1), transcript variant X12, mRNA
Length=4602
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 1076 TTTCTTCAGGGTCT 1063
> gi|1034644358|ref|XM_005265853.2| PREDICTED: Homo sapiens WW
and C2 domain containing 1 (WWC1), transcript variant X10, mRNA
Length=4122
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 641 TTTCTTCAGGGTCT 628
> gi|530380922|ref|XM_005265850.1| PREDICTED: Homo sapiens WW and
C2 domain containing 1 (WWC1), transcript variant X9, mRNA
Length=4167
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 641 TTTCTTCAGGGTCT 628
> gi|1034644356|ref|XM_017009276.1| PREDICTED: Homo sapiens WW
and C2 domain containing 1 (WWC1), transcript variant X8, mRNA
Length=4314
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 641 TTTCTTCAGGGTCT 628
> gi|767938217|ref|XM_011534491.1| PREDICTED: Homo sapiens WW and
C2 domain containing 1 (WWC1), transcript variant X7, mRNA
Length=4317
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 641 TTTCTTCAGGGTCT 628
> gi|767938213|ref|XM_011534489.1| PREDICTED: Homo sapiens WW and
C2 domain containing 1 (WWC1), transcript variant X4, mRNA
Length=4332
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 641 TTTCTTCAGGGTCT 628
> gi|767938209|ref|XM_011534487.1| PREDICTED: Homo sapiens WW and
C2 domain containing 1 (WWC1), transcript variant X3, mRNA
Length=4335
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 641 TTTCTTCAGGGTCT 628
> gi|767938215|ref|XM_011534490.1| PREDICTED: Homo sapiens WW and
C2 domain containing 1 (WWC1), transcript variant X6, mRNA
Length=4329
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 641 TTTCTTCAGGGTCT 628
> gi|767938211|ref|XM_011534488.1| PREDICTED: Homo sapiens WW and
C2 domain containing 1 (WWC1), transcript variant X5, mRNA
Length=4332
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 641 TTTCTTCAGGGTCT 628
> gi|767938207|ref|XM_011534486.1| PREDICTED: Homo sapiens WW and
C2 domain containing 1 (WWC1), transcript variant X2, mRNA
Length=4347
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 641 TTTCTTCAGGGTCT 628
> gi|767938205|ref|XM_011534485.1| PREDICTED: Homo sapiens WW and
C2 domain containing 1 (WWC1), transcript variant X1, mRNA
Length=4350
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 641 TTTCTTCAGGGTCT 628
> gi|242247262|ref|NM_015238.2| Homo sapiens WW and C2 domain containing
1 (WWC1), transcript variant 3, mRNA
Length=6735
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 684 TTTCTTCAGGGTCT 671
> gi|242247256|ref|NM_001161662.1| Homo sapiens WW and C2 domain
containing 1 (WWC1), transcript variant 2, mRNA
Length=6750
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 684 TTTCTTCAGGGTCT 671
> gi|242247250|ref|NM_001161661.1| Homo sapiens WW and C2 domain
containing 1 (WWC1), transcript variant 1, mRNA
Length=6753
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 TTTCTTCAGGGTCT 16
||||||||||||||
Sbjct 684 TTTCTTCAGGGTCT 671
> gi|1034644708|ref|XM_005271972.4| PREDICTED: Homo sapiens sorting
nexin 24 (SNX24), transcript variant X2, mRNA
Length=3830
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 2674 TTCTTCAGGGTCTT 2661
> gi|1034644709|ref|XM_011543350.2| PREDICTED: Homo sapiens sorting
nexin 24 (SNX24), transcript variant X3, mRNA
Length=3897
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 2740 TTCTTCAGGGTCTT 2727
> gi|1034644707|ref|XM_011543349.2| PREDICTED: Homo sapiens sorting
nexin 24 (SNX24), transcript variant X1, mRNA
Length=3962
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 2805 TTCTTCAGGGTCTT 2792
> gi|1034644710|ref|XM_006714592.3| PREDICTED: Homo sapiens sorting
nexin 24 (SNX24), transcript variant X4, mRNA
Length=3833
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 TTCTTCAGGGTCTT 17
||||||||||||||
Sbjct 2676 TTCTTCAGGGTCTT 2663
> gi|767935889|ref|XM_011543390.1| PREDICTED: Homo sapiens arylsulfatase
B (ARSB), transcript variant X1, mRNA
Length=5289
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 1950 CTTTCTTCAGGGTC 1937
> gi|158634485|ref|NM_000046.3| Homo sapiens arylsulfatase B (ARSB),
transcript variant 1, mRNA
Length=6076
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 2737 CTTTCTTCAGGGTC 2724
> gi|1034634336|ref|XM_017006786.1| PREDICTED: Homo sapiens SET
domain containing 5 (SETD5), transcript variant X31, mRNA
Length=6753
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4058 ACTTTCTTCAGGGT 4071
> gi|1034634334|ref|XM_017006785.1| PREDICTED: Homo sapiens SET
domain containing 5 (SETD5), transcript variant X30, mRNA
Length=6833
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4058 ACTTTCTTCAGGGT 4071
> gi|1034634331|ref|XM_017006784.1| PREDICTED: Homo sapiens SET
domain containing 5 (SETD5), transcript variant X28, mRNA
Length=7188
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4058 ACTTTCTTCAGGGT 4071
> gi|1034634327|ref|XM_017006782.1| PREDICTED: Homo sapiens SET
domain containing 5 (SETD5), transcript variant X26, mRNA
Length=8240
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4058 ACTTTCTTCAGGGT 4071
> gi|1034634297|ref|XM_017006767.1| PREDICTED: Homo sapiens SET
domain containing 5 (SETD5), transcript variant X1, mRNA
Length=9067
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 2402 ACTTTCTTCAGGGT 2415
> gi|1034634313|ref|XM_017006775.1| PREDICTED: Homo sapiens SET
domain containing 5 (SETD5), transcript variant X16, mRNA
Length=10570
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4058 ACTTTCTTCAGGGT 4071
> gi|1034634309|ref|XM_017006773.1| PREDICTED: Homo sapiens SET
domain containing 5 (SETD5), transcript variant X12, mRNA
Length=10627
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4058 ACTTTCTTCAGGGT 4071
> gi|1034634307|ref|XM_017006772.1| PREDICTED: Homo sapiens SET
domain containing 5 (SETD5), transcript variant X11, mRNA
Length=10627
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4058 ACTTTCTTCAGGGT 4071
> gi|1034634301|ref|XM_017006769.1| PREDICTED: Homo sapiens SET
domain containing 5 (SETD5), transcript variant X6, mRNA
Length=10684
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4058 ACTTTCTTCAGGGT 4071
> gi|1034634303|ref|XM_017006770.1| PREDICTED: Homo sapiens SET
domain containing 5 (SETD5), transcript variant X7, mRNA
Length=10666
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4058 ACTTTCTTCAGGGT 4071
> gi|1034634333|ref|XR_001740195.1| PREDICTED: Homo sapiens SET
domain containing 5 (SETD5), transcript variant X29, misc_RNA
Length=10763
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 ACTTTCTTCAGGGT 14
||||||||||||||
Sbjct 4058 ACTTTCTTCAGGGT 4071
> gi|1034618315|ref|XR_001739169.1| PREDICTED: Homo sapiens uncharacterized
LOC101928278 (LOC101928278), transcript variant
X1, ncRNA
Length=13033
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 CTTTCTTCAGGGTC 15
||||||||||||||
Sbjct 4281 CTTTCTTCAGGGTC 4294
> gi|1007399303|ref|NR_135526.1| Homo sapiens uncharacterized LOC105373635
(LOC105373635), long non-coding RNA
Length=553
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 TCTTCAGGGTCTTG 18
||||||||||||||
Sbjct 77 TCTTCAGGGTCTTG 64
> gi|318037621|ref|NM_001200051.1| Homo sapiens N-acetylneuraminate
pyruvate lyase (dihydrodipicolinate synthase) (NPL), transcript
variant 4, mRNA
Length=1856
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CTTCAGGGTCTTGT 19
||||||||||||||
Sbjct 450 CTTCAGGGTCTTGT 463
> gi|318037615|ref|NM_001200052.1| Homo sapiens N-acetylneuraminate
pyruvate lyase (dihydrodipicolinate synthase) (NPL), transcript
variant 5, mRNA
Length=2782
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CTTCAGGGTCTTGT 19
||||||||||||||
Sbjct 450 CTTCAGGGTCTTGT 463
> gi|318037608|ref|NM_001200056.1| Homo sapiens N-acetylneuraminate
pyruvate lyase (dihydrodipicolinate synthase) (NPL), transcript
variant 3, mRNA
Length=1988
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CTTCAGGGTCTTGT 19
||||||||||||||
Sbjct 450 CTTCAGGGTCTTGT 463
> gi|318037612|ref|NM_030769.2| Homo sapiens N-acetylneuraminate
pyruvate lyase (dihydrodipicolinate synthase) (NPL), transcript
variant 1, mRNA
Length=2867
Score = 28.2 bits (14), Expect = 9.2
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 6 CTTCAGGGTCTTGT 19
||||||||||||||
Sbjct 450 CTTCAGGGTCTTGT 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2921475425
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2