BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= ACGTCCCATTGCTCTGAATC (evalue = 10)
Length=20
Score E
Sequences producing significant alignments: (Bits) Value
gi|1034605112|ref|XR_001753309.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605110|ref|XR_001753307.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605102|ref|XM_011525775.2| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605103|ref|XM_017026105.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605105|ref|XM_011525779.2| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605108|ref|XM_017026107.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605111|ref|XR_001753308.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|1034605106|ref|XM_017026106.1| PREDICTED: Homo sapiens prote... 40.1 0.002
gi|767997972|ref|XM_011525776.1| PREDICTED: Homo sapiens protei... 40.1 0.002
gi|391224432|ref|NM_001042388.2| Homo sapiens protein phosphata... 40.1 0.002
gi|391224433|ref|NM_005134.3| Homo sapiens protein phosphatase ... 40.1 0.002
gi|391224434|ref|NR_052003.1| Homo sapiens protein phosphatase ... 40.1 0.002
gi|1034591447|ref|XM_011521856.2| PREDICTED: Homo sapiens RAB27... 32.2 0.47
gi|332078504|ref|NM_183234.2| Homo sapiens RAB27A, member RAS o... 32.2 0.47
gi|332078501|ref|NM_004580.4| Homo sapiens RAB27A, member RAS o... 32.2 0.47
gi|332078500|ref|NM_183236.2| Homo sapiens RAB27A, member RAS o... 32.2 0.47
gi|767984875|ref|XM_011521852.1| PREDICTED: Homo sapiens RAB27A... 32.2 0.47
gi|767984879|ref|XM_011521854.1| PREDICTED: Homo sapiens RAB27A... 32.2 0.47
gi|332078499|ref|NM_183235.2| Homo sapiens RAB27A, member RAS o... 32.2 0.47
gi|1034591445|ref|XM_011521855.2| PREDICTED: Homo sapiens RAB27... 32.2 0.47
gi|1034591446|ref|XM_005254576.4| PREDICTED: Homo sapiens RAB27... 32.2 0.47
gi|1034683535|ref|XR_914987.2| PREDICTED: Homo sapiens uncharac... 30.2 1.9
gi|1034683536|ref|XR_001732890.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034688833|ref|XR_929187.2| PREDICTED: Homo sapiens uncharac... 30.2 1.9
gi|1034619437|ref|XR_923313.2| PREDICTED: Homo sapiens uncharac... 30.2 1.9
gi|122937284|ref|NM_001080444.1| Homo sapiens immunoglobulin su... 28.2 7.3
gi|1034627002|ref|XR_001754813.1| PREDICTED: Homo sapiens immun... 28.2 7.3
gi|1034626998|ref|XM_017028279.1| PREDICTED: Homo sapiens immun... 28.2 7.3
gi|1034627000|ref|XM_017028280.1| PREDICTED: Homo sapiens immun... 28.2 7.3
gi|768020309|ref|XM_011529473.1| PREDICTED: Homo sapiens immuno... 28.2 7.3
gi|768020305|ref|XM_011529472.1| PREDICTED: Homo sapiens immuno... 28.2 7.3
gi|42822875|ref|NM_203403.1| Homo sapiens leucine rich adaptor ... 28.2 7.3
gi|1034664968|ref|XR_001746281.1| PREDICTED: Homo sapiens leuci... 28.2 7.3
gi|1034586934|ref|XM_011536707.2| PREDICTED: Homo sapiens coile... 28.2 7.3
gi|1034586933|ref|XM_011536706.2| PREDICTED: Homo sapiens coile... 28.2 7.3
gi|767937668|ref|XR_944323.1| PREDICTED: Homo sapiens Rho GTPas... 28.2 7.3
gi|1034644281|ref|XR_944319.2| PREDICTED: Homo sapiens Rho GTPa... 28.2 7.3
gi|1034644284|ref|XR_944321.2| PREDICTED: Homo sapiens Rho GTPa... 28.2 7.3
gi|1034644285|ref|XR_001742048.1| PREDICTED: Homo sapiens Rho G... 28.2 7.3
gi|1034644276|ref|XR_944317.2| PREDICTED: Homo sapiens Rho GTPa... 28.2 7.3
gi|1034644270|ref|XR_944313.2| PREDICTED: Homo sapiens Rho GTPa... 28.2 7.3
gi|1034644273|ref|XR_001742046.1| PREDICTED: Homo sapiens Rho G... 28.2 7.3
gi|1034644271|ref|XR_944314.2| PREDICTED: Homo sapiens Rho GTPa... 28.2 7.3
gi|1034644264|ref|XR_001742044.1| PREDICTED: Homo sapiens Rho G... 28.2 7.3
gi|1034644266|ref|XR_001742045.1| PREDICTED: Homo sapiens Rho G... 28.2 7.3
gi|1034644265|ref|XR_944311.2| PREDICTED: Homo sapiens Rho GTPa... 28.2 7.3
gi|1034644269|ref|XR_944312.2| PREDICTED: Homo sapiens Rho GTPa... 28.2 7.3
> gi|1034605112|ref|XR_001753309.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X9, misc_RNA
Length=4002
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2550 ACGTCCCATTGCTCTGAATC 2569
> gi|1034605110|ref|XR_001753307.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X7, misc_RNA
Length=4219
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2720 ACGTCCCATTGCTCTGAATC 2739
> gi|1034605102|ref|XM_011525775.2| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X1, mRNA
Length=4095
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2595 ACGTCCCATTGCTCTGAATC 2614
> gi|1034605103|ref|XM_017026105.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X3, mRNA
Length=3936
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2436 ACGTCCCATTGCTCTGAATC 2455
> gi|1034605105|ref|XM_011525779.2| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X4, mRNA
Length=3762
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2262 ACGTCCCATTGCTCTGAATC 2281
> gi|1034605108|ref|XM_017026107.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X6, mRNA
Length=3790
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2288 ACGTCCCATTGCTCTGAATC 2307
> gi|1034605111|ref|XR_001753308.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X8, misc_RNA
Length=4007
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2505 ACGTCCCATTGCTCTGAATC 2524
> gi|1034605106|ref|XM_017026106.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X5, mRNA
Length=3775
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2273 ACGTCCCATTGCTCTGAATC 2292
> gi|767997972|ref|XM_011525776.1| PREDICTED: Homo sapiens protein
phosphatase 4 regulatory subunit 1 (PPP4R1), transcript
variant X2, mRNA
Length=3961
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2459 ACGTCCCATTGCTCTGAATC 2478
> gi|391224432|ref|NM_001042388.2| Homo sapiens protein phosphatase
4 regulatory subunit 1 (PPP4R1), transcript variant 1,
mRNA
Length=3980
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2469 ACGTCCCATTGCTCTGAATC 2488
> gi|391224433|ref|NM_005134.3| Homo sapiens protein phosphatase
4 regulatory subunit 1 (PPP4R1), transcript variant 2, mRNA
Length=3929
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2418 ACGTCCCATTGCTCTGAATC 2437
> gi|391224434|ref|NR_052003.1| Homo sapiens protein phosphatase
4 regulatory subunit 1 (PPP4R1), transcript variant 3, non-coding
RNA
Length=3947
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 1 ACGTCCCATTGCTCTGAATC 20
||||||||||||||||||||
Sbjct 2436 ACGTCCCATTGCTCTGAATC 2455
> gi|1034591447|ref|XM_011521856.2| PREDICTED: Homo sapiens RAB27A,
member RAS oncogene family (RAB27A), transcript variant
X5, mRNA
Length=3332
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGAAT 19
||||||||||||||||
Sbjct 1506 TCCCATTGCTCTGAAT 1521
> gi|332078504|ref|NM_183234.2| Homo sapiens RAB27A, member RAS
oncogene family (RAB27A), transcript variant 2, mRNA
Length=3455
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGAAT 19
||||||||||||||||
Sbjct 1614 TCCCATTGCTCTGAAT 1629
> gi|332078501|ref|NM_004580.4| Homo sapiens RAB27A, member RAS
oncogene family (RAB27A), transcript variant 1, mRNA
Length=3474
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGAAT 19
||||||||||||||||
Sbjct 1633 TCCCATTGCTCTGAAT 1648
> gi|332078500|ref|NM_183236.2| Homo sapiens RAB27A, member RAS
oncogene family (RAB27A), transcript variant 4, mRNA
Length=3415
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGAAT 19
||||||||||||||||
Sbjct 1574 TCCCATTGCTCTGAAT 1589
> gi|767984875|ref|XM_011521852.1| PREDICTED: Homo sapiens RAB27A,
member RAS oncogene family (RAB27A), transcript variant
X1, mRNA
Length=3663
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGAAT 19
||||||||||||||||
Sbjct 1837 TCCCATTGCTCTGAAT 1852
> gi|767984879|ref|XM_011521854.1| PREDICTED: Homo sapiens RAB27A,
member RAS oncogene family (RAB27A), transcript variant
X2, mRNA
Length=3536
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGAAT 19
||||||||||||||||
Sbjct 1710 TCCCATTGCTCTGAAT 1725
> gi|332078499|ref|NM_183235.2| Homo sapiens RAB27A, member RAS
oncogene family (RAB27A), transcript variant 3, mRNA
Length=3464
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGAAT 19
||||||||||||||||
Sbjct 1623 TCCCATTGCTCTGAAT 1638
> gi|1034591445|ref|XM_011521855.2| PREDICTED: Homo sapiens RAB27A,
member RAS oncogene family (RAB27A), transcript variant
X3, mRNA
Length=4925
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGAAT 19
||||||||||||||||
Sbjct 3099 TCCCATTGCTCTGAAT 3114
> gi|1034591446|ref|XM_005254576.4| PREDICTED: Homo sapiens RAB27A,
member RAS oncogene family (RAB27A), transcript variant
X4, mRNA
Length=4702
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGAAT 19
||||||||||||||||
Sbjct 2876 TCCCATTGCTCTGAAT 2891
> gi|1034683535|ref|XR_914987.2| PREDICTED: Homo sapiens uncharacterized
LOC105370202 (LOC105370202), transcript variant X3,
ncRNA
Length=911
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 ACGTCCCATTGCTCT 15
|||||||||||||||
Sbjct 59 ACGTCCCATTGCTCT 45
> gi|1034683536|ref|XR_001732890.1| PREDICTED: Homo sapiens uncharacterized
LOC105370202 (LOC105370202), transcript variant
X4, ncRNA
Length=1007
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 ACGTCCCATTGCTCT 15
|||||||||||||||
Sbjct 59 ACGTCCCATTGCTCT 45
> gi|1034688833|ref|XR_929187.2| PREDICTED: Homo sapiens uncharacterized
LOC105373608 (LOC105373608), transcript variant X2,
ncRNA
Length=5885
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 ACGTCCCATTGCTCT 15
|||||||||||||||
Sbjct 5238 ACGTCCCATTGCTCT 5224
> gi|1034619437|ref|XR_923313.2| PREDICTED: Homo sapiens uncharacterized
LOC105373608 (LOC105373608), transcript variant X2,
ncRNA
Length=5885
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 1 ACGTCCCATTGCTCT 15
|||||||||||||||
Sbjct 5238 ACGTCCCATTGCTCT 5224
> gi|122937284|ref|NM_001080444.1| Homo sapiens immunoglobulin
superfamily member 5 (IGSF5), mRNA
Length=2066
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GTCCCATTGCTCTG 16
||||||||||||||
Sbjct 738 GTCCCATTGCTCTG 725
> gi|1034627002|ref|XR_001754813.1| PREDICTED: Homo sapiens immunoglobulin
superfamily member 5 (IGSF5), transcript variant
X5, misc_RNA
Length=2508
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GTCCCATTGCTCTG 16
||||||||||||||
Sbjct 2011 GTCCCATTGCTCTG 1998
> gi|1034626998|ref|XM_017028279.1| PREDICTED: Homo sapiens immunoglobulin
superfamily member 5 (IGSF5), transcript variant
X1, mRNA
Length=4152
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GTCCCATTGCTCTG 16
||||||||||||||
Sbjct 2011 GTCCCATTGCTCTG 1998
> gi|1034627000|ref|XM_017028280.1| PREDICTED: Homo sapiens immunoglobulin
superfamily member 5 (IGSF5), transcript variant
X2, mRNA
Length=4174
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GTCCCATTGCTCTG 16
||||||||||||||
Sbjct 2011 GTCCCATTGCTCTG 1998
> gi|768020309|ref|XM_011529473.1| PREDICTED: Homo sapiens immunoglobulin
superfamily member 5 (IGSF5), transcript variant
X4, mRNA
Length=3302
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GTCCCATTGCTCTG 16
||||||||||||||
Sbjct 2011 GTCCCATTGCTCTG 1998
> gi|768020305|ref|XM_011529472.1| PREDICTED: Homo sapiens immunoglobulin
superfamily member 5 (IGSF5), transcript variant
X3, mRNA
Length=3324
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 GTCCCATTGCTCTG 16
||||||||||||||
Sbjct 2011 GTCCCATTGCTCTG 1998
> gi|42822875|ref|NM_203403.1| Homo sapiens leucine rich adaptor
protein 1 like (LURAP1L), mRNA
Length=2718
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CCCATTGCTCTGAA 18
||||||||||||||
Sbjct 1699 CCCATTGCTCTGAA 1686
> gi|1034664968|ref|XR_001746281.1| PREDICTED: Homo sapiens leucine
rich adaptor protein 1 like (LURAP1L), transcript variant
X2, misc_RNA
Length=1964
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 5 CCCATTGCTCTGAA 18
||||||||||||||
Sbjct 1902 CCCATTGCTCTGAA 1889
> gi|1034586934|ref|XM_011536707.2| PREDICTED: Homo sapiens coiled-coil
domain containing 85C (CCDC85C), transcript variant
X3, mRNA
Length=1979
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 1889 TCCCATTGCTCTGA 1902
> gi|1034586933|ref|XM_011536706.2| PREDICTED: Homo sapiens coiled-coil
domain containing 85C (CCDC85C), transcript variant
X2, mRNA
Length=3219
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 984 TCCCATTGCTCTGA 997
> gi|767937668|ref|XR_944323.1| PREDICTED: Homo sapiens Rho GTPase
activating protein 26 (ARHGAP26), transcript variant X27,
misc_RNA
Length=2177
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 1641 TCCCATTGCTCTGA 1654
> gi|1034644281|ref|XR_944319.2| PREDICTED: Homo sapiens Rho GTPase
activating protein 26 (ARHGAP26), transcript variant X15,
misc_RNA
Length=3182
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 2661 TCCCATTGCTCTGA 2674
> gi|1034644284|ref|XR_944321.2| PREDICTED: Homo sapiens Rho GTPase
activating protein 26 (ARHGAP26), transcript variant X18,
misc_RNA
Length=3073
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 2551 TCCCATTGCTCTGA 2564
> gi|1034644285|ref|XR_001742048.1| PREDICTED: Homo sapiens Rho
GTPase activating protein 26 (ARHGAP26), transcript variant
X19, misc_RNA
Length=9647
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 2548 TCCCATTGCTCTGA 2561
> gi|1034644276|ref|XR_944317.2| PREDICTED: Homo sapiens Rho GTPase
activating protein 26 (ARHGAP26), transcript variant X12,
misc_RNA
Length=3216
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 2693 TCCCATTGCTCTGA 2706
> gi|1034644270|ref|XR_944313.2| PREDICTED: Homo sapiens Rho GTPase
activating protein 26 (ARHGAP26), transcript variant X6,
misc_RNA
Length=3352
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 2829 TCCCATTGCTCTGA 2842
> gi|1034644273|ref|XR_001742046.1| PREDICTED: Homo sapiens Rho
GTPase activating protein 26 (ARHGAP26), transcript variant
X9, misc_RNA
Length=3261
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 2738 TCCCATTGCTCTGA 2751
> gi|1034644271|ref|XR_944314.2| PREDICTED: Homo sapiens Rho GTPase
activating protein 26 (ARHGAP26), transcript variant X7,
misc_RNA
Length=9925
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 2826 TCCCATTGCTCTGA 2839
> gi|1034644264|ref|XR_001742044.1| PREDICTED: Homo sapiens Rho
GTPase activating protein 26 (ARHGAP26), transcript variant
X1, misc_RNA
Length=3431
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 2906 TCCCATTGCTCTGA 2919
> gi|1034644266|ref|XR_001742045.1| PREDICTED: Homo sapiens Rho
GTPase activating protein 26 (ARHGAP26), transcript variant
X3, misc_RNA
Length=3366
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 2840 TCCCATTGCTCTGA 2853
> gi|1034644265|ref|XR_944311.2| PREDICTED: Homo sapiens Rho GTPase
activating protein 26 (ARHGAP26), transcript variant X2,
misc_RNA
Length=10002
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 2903 TCCCATTGCTCTGA 2916
> gi|1034644269|ref|XR_944312.2| PREDICTED: Homo sapiens Rho GTPase
activating protein 26 (ARHGAP26), transcript variant X5,
misc_RNA
Length=3543
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 TCCCATTGCTCTGA 17
||||||||||||||
Sbjct 3020 TCCCATTGCTCTGA 3033
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2337180340
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2