BLASTN 2.4.0+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Database: rna.fa
176,426 sequences; 587,117,901 total letters
Query= AAAGGCAGCTCCAGCAATAA (evalue = 10)
Length=20
Score E
Sequences producing significant alignments: (Bits) Value
gi|166197663|ref|NM_001237.3| Homo sapiens cyclin A2 (CCNA2), mRNA 40.1 0.002
gi|475505353|ref|NM_001277372.1| Homo sapiens KIAA2012 (KIAA201... 32.2 0.47
gi|1034610894|ref|XM_006712172.2| PREDICTED: Homo sapiens KIAA2... 32.2 0.47
gi|1034610893|ref|XM_011510468.2| PREDICTED: Homo sapiens KIAA2... 32.2 0.47
gi|1034610892|ref|XM_011510467.2| PREDICTED: Homo sapiens KIAA2... 32.2 0.47
gi|1034572603|ref|XR_949847.2| PREDICTED: Homo sapiens autophag... 30.2 1.9
gi|1034572604|ref|XR_949848.2| PREDICTED: Homo sapiens autophag... 30.2 1.9
gi|1034572601|ref|XR_001747796.1| PREDICTED: Homo sapiens autop... 30.2 1.9
gi|1034572602|ref|XM_011544867.2| PREDICTED: Homo sapiens autop... 30.2 1.9
gi|1034572600|ref|XM_011544866.2| PREDICTED: Homo sapiens autop... 30.2 1.9
gi|1034572599|ref|XM_011544865.2| PREDICTED: Homo sapiens autop... 30.2 1.9
gi|1034572596|ref|XM_011544864.2| PREDICTED: Homo sapiens autop... 30.2 1.9
gi|1034572595|ref|XM_011544863.2| PREDICTED: Homo sapiens autop... 30.2 1.9
gi|1034572597|ref|XM_005273849.3| PREDICTED: Homo sapiens autop... 30.2 1.9
gi|1034572598|ref|XM_005273850.3| PREDICTED: Homo sapiens autop... 30.2 1.9
gi|239047270|ref|NM_015104.2| Homo sapiens autophagy related 2A... 30.2 1.9
gi|1034696656|ref|XR_001758638.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034607272|ref|XR_001753664.1| PREDICTED: Homo sapiens siali... 30.2 1.9
gi|1034607269|ref|XM_011526732.2| PREDICTED: Homo sapiens siali... 30.2 1.9
gi|1034607268|ref|XM_011526730.2| PREDICTED: Homo sapiens siali... 30.2 1.9
gi|1034607265|ref|XM_017026595.1| PREDICTED: Homo sapiens siali... 30.2 1.9
gi|1034607267|ref|XR_001753663.1| PREDICTED: Homo sapiens siali... 30.2 1.9
gi|1034607270|ref|XM_017026596.1| PREDICTED: Homo sapiens siali... 30.2 1.9
gi|1034607264|ref|XM_006723146.3| PREDICTED: Homo sapiens siali... 30.2 1.9
gi|310616713|ref|NM_014441.2| Homo sapiens sialic acid binding ... 30.2 1.9
gi|310616724|ref|NM_001198558.1| Homo sapiens sialic acid bindi... 30.2 1.9
gi|1034658599|ref|XR_001745351.1| PREDICTED: Homo sapiens uncha... 30.2 1.9
gi|1034685361|ref|XR_001733777.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034696080|ref|XM_017030424.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034696084|ref|XM_017030426.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034696082|ref|XM_017030425.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034691099|ref|XR_936525.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034689173|ref|XR_001743738.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034689174|ref|XR_001743739.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|327412331|ref|NR_038080.1| Homo sapiens long intergenic non-... 28.2 7.3
gi|1034600320|ref|XR_934495.2| PREDICTED: Homo sapiens coiled-c... 28.2 7.3
gi|343183423|ref|NM_017950.3| Homo sapiens coiled-coil domain c... 28.2 7.3
gi|1034597550|ref|XR_001752364.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034594452|ref|XM_005255278.3| PREDICTED: Homo sapiens ubinu... 28.2 7.3
gi|1034592313|ref|XR_001751417.1| PREDICTED: Homo sapiens RCC1 ... 28.2 7.3
gi|1034592312|ref|XR_001751416.1| PREDICTED: Homo sapiens RCC1 ... 28.2 7.3
gi|63054859|ref|NM_001017919.1| Homo sapiens RCC1 domain contai... 28.2 7.3
gi|63054857|ref|NM_033544.2| Homo sapiens RCC1 domain containin... 28.2 7.3
gi|1034592310|ref|XR_001751414.1| PREDICTED: Homo sapiens RCC1 ... 28.2 7.3
gi|1034592311|ref|XR_001751415.1| PREDICTED: Homo sapiens RCC1 ... 28.2 7.3
gi|459683878|ref|NM_003403.4| Homo sapiens YY1 transcription fa... 28.2 7.3
gi|671696012|ref|NM_005157.5| Homo sapiens ABL proto-oncogene 1... 28.2 7.3
gi|62362411|ref|NM_007313.2| Homo sapiens ABL proto-oncogene 1,... 28.2 7.3
gi|1034657680|ref|XR_001744911.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034658014|ref|XM_017012907.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034658012|ref|XM_017012906.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|283483994|ref|NM_000024.5| Homo sapiens adrenoceptor beta 2 ... 28.2 7.3
gi|1034646990|ref|XR_001742420.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034646991|ref|XR_001742421.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|115527085|ref|NM_000258.2| Homo sapiens myosin light chain 3... 28.2 7.3
gi|1034637152|ref|XR_940538.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034619783|ref|XR_001739879.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034619784|ref|XR_001739880.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034699447|ref|XR_001736820.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034676450|ref|XR_001756016.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034675781|ref|XR_001755747.1| PREDICTED: Homo sapiens uncha... 28.2 7.3
gi|1034626547|ref|XR_936795.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034626544|ref|XR_936790.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034626542|ref|XR_936787.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|1034626543|ref|XR_936788.2| PREDICTED: Homo sapiens uncharac... 28.2 7.3
gi|328927013|ref|NM_001205317.1| Homo sapiens regulating synapt... 28.2 7.3
gi|328927012|ref|NM_182970.3| Homo sapiens regulating synaptic ... 28.2 7.3
gi|38149990|ref|NM_003091.3| Homo sapiens small nuclear ribonuc... 28.2 7.3
gi|38150006|ref|NM_198216.1| Homo sapiens small nuclear ribonuc... 28.2 7.3
gi|1034609934|ref|XM_011527442.2| PREDICTED: Homo sapiens siali... 28.2 7.3
gi|1034609933|ref|XM_011527441.2| PREDICTED: Homo sapiens siali... 28.2 7.3
gi|530788281|ref|NM_033329.2| Homo sapiens sialic acid binding ... 28.2 7.3
gi|530788280|ref|NM_053003.3| Homo sapiens sialic acid binding ... 28.2 7.3
gi|1034607273|ref|XM_011526734.2| PREDICTED: Homo sapiens siali... 28.2 7.3
gi|1034607274|ref|XM_011526735.2| PREDICTED: Homo sapiens siali... 28.2 7.3
gi|94538342|ref|NM_014442.2| Homo sapiens sialic acid binding I... 28.2 7.3
gi|816197589|ref|NM_001308363.1| Homo sapiens microtubule assoc... 28.2 7.3
gi|1034608386|ref|XM_017026931.1| PREDICTED: Homo sapiens micro... 28.2 7.3
gi|816197655|ref|NM_018174.5| Homo sapiens microtubule associat... 28.2 7.3
gi|1034608384|ref|XM_017026930.1| PREDICTED: Homo sapiens micro... 28.2 7.3
gi|148613883|ref|NM_004822.2| Homo sapiens netrin 1 (NTN1), mRNA 28.2 7.3
gi|1034596561|ref|XM_017023866.1| PREDICTED: Homo sapiens ubiqu... 28.2 7.3
gi|1034596559|ref|XM_017023865.1| PREDICTED: Homo sapiens ubiqu... 28.2 7.3
gi|1034596563|ref|XM_017023867.1| PREDICTED: Homo sapiens ubiqu... 28.2 7.3
gi|578829353|ref|XM_006721332.1| PREDICTED: Homo sapiens ubiqui... 28.2 7.3
gi|1034596555|ref|XM_017023863.1| PREDICTED: Homo sapiens ubiqu... 28.2 7.3
gi|767990828|ref|XM_011523443.1| PREDICTED: Homo sapiens ubiqui... 28.2 7.3
gi|1034596565|ref|XM_017023868.1| PREDICTED: Homo sapiens ubiqu... 28.2 7.3
gi|767990822|ref|XM_011523440.1| PREDICTED: Homo sapiens ubiqui... 28.2 7.3
gi|767990824|ref|XM_011523441.1| PREDICTED: Homo sapiens ubiqui... 28.2 7.3
gi|1034596557|ref|XM_017023864.1| PREDICTED: Homo sapiens ubiqu... 28.2 7.3
gi|1034596567|ref|XM_017023869.1| PREDICTED: Homo sapiens ubiqu... 28.2 7.3
gi|440918733|ref|NR_073577.1| Homo sapiens ubiquitin specific p... 28.2 7.3
gi|440918734|ref|NR_073578.1| Homo sapiens ubiquitin specific p... 28.2 7.3
gi|119220604|ref|NM_005153.2| Homo sapiens ubiquitin specific p... 28.2 7.3
gi|440918694|ref|NM_001272075.1| Homo sapiens ubiquitin specifi... 28.2 7.3
gi|1034586177|ref|XR_001750155.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|331284124|ref|NM_015409.4| Homo sapiens E1A binding protein ... 28.2 7.3
gi|385862230|ref|NM_001258426.1| Homo sapiens solute carrier fa... 28.2 7.3
gi|385862232|ref|NM_001258427.1| Homo sapiens solute carrier fa... 28.2 7.3
gi|151101448|ref|NM_031467.2| Homo sapiens solute carrier famil... 28.2 7.3
gi|385862234|ref|NM_001258428.1| Homo sapiens solute carrier fa... 28.2 7.3
gi|1034646406|ref|XM_011537694.2| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034646398|ref|XM_017009939.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034646395|ref|XM_005268521.3| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034646390|ref|XR_001742292.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034646391|ref|XM_017009936.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034646393|ref|XM_017009937.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034646388|ref|XM_017009935.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034646402|ref|XM_017009941.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034646396|ref|XM_017009938.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034646386|ref|XM_017009934.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034646400|ref|XM_017009940.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|1034646384|ref|XM_017009933.1| PREDICTED: Homo sapiens solut... 28.2 7.3
gi|298676489|ref|NR_033781.1| Homo sapiens hydroxy-delta-5-ster... 28.2 7.3
gi|115345345|ref|NM_000862.2| Homo sapiens hydroxy-delta-5-ster... 28.2 7.3
gi|1034558032|ref|XM_017001119.1| PREDICTED: Homo sapiens hydro... 28.2 7.3
gi|1034558031|ref|XM_011541314.2| PREDICTED: Homo sapiens hydro... 28.2 7.3
gi|260763929|ref|NM_000198.3| Homo sapiens hydroxy-delta-5-ster... 28.2 7.3
gi|260763930|ref|NM_001166120.1| Homo sapiens hydroxy-delta-5-s... 28.2 7.3
> gi|166197663|ref|NM_001237.3| Homo sapiens cyclin A2 (CCNA2),
mRNA
Length=2811
Score = 40.1 bits (20), Expect = 0.002
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAGCAATAA 20
||||||||||||||||||||
Sbjct 1385 AAAGGCAGCTCCAGCAATAA 1366
> gi|475505353|ref|NM_001277372.1| Homo sapiens KIAA2012 (KIAA2012),
mRNA
Length=4029
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 1 AAAGGCAGCTCCAGCA 16
||||||||||||||||
Sbjct 3402 AAAGGCAGCTCCAGCA 3417
> gi|1034610894|ref|XM_006712172.2| PREDICTED: Homo sapiens KIAA2012
(KIAA2012), transcript variant X3, mRNA
Length=4144
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 1 AAAGGCAGCTCCAGCA 16
||||||||||||||||
Sbjct 3304 AAAGGCAGCTCCAGCA 3319
> gi|1034610893|ref|XM_011510468.2| PREDICTED: Homo sapiens KIAA2012
(KIAA2012), transcript variant X2, mRNA
Length=4147
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 1 AAAGGCAGCTCCAGCA 16
||||||||||||||||
Sbjct 3307 AAAGGCAGCTCCAGCA 3322
> gi|1034610892|ref|XM_011510467.2| PREDICTED: Homo sapiens KIAA2012
(KIAA2012), transcript variant X1, mRNA
Length=4252
Score = 32.2 bits (16), Expect = 0.47
Identities = 16/16 (100%), Gaps = 0/16 (0%)
Strand=Plus/Plus
Query 1 AAAGGCAGCTCCAGCA 16
||||||||||||||||
Sbjct 3412 AAAGGCAGCTCCAGCA 3427
> gi|1034572603|ref|XR_949847.2| PREDICTED: Homo sapiens autophagy
related 2A (ATG2A), transcript variant X9, misc_RNA
Length=3734
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 980 AGGCAGCTCCAGCAA 994
> gi|1034572604|ref|XR_949848.2| PREDICTED: Homo sapiens autophagy
related 2A (ATG2A), transcript variant X10, misc_RNA
Length=3738
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 980 AGGCAGCTCCAGCAA 994
> gi|1034572601|ref|XR_001747796.1| PREDICTED: Homo sapiens autophagy
related 2A (ATG2A), transcript variant X7, misc_RNA
Length=4510
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 980 AGGCAGCTCCAGCAA 994
> gi|1034572602|ref|XM_011544867.2| PREDICTED: Homo sapiens autophagy
related 2A (ATG2A), transcript variant X8, mRNA
Length=4301
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 980 AGGCAGCTCCAGCAA 994
> gi|1034572600|ref|XM_011544866.2| PREDICTED: Homo sapiens autophagy
related 2A (ATG2A), transcript variant X6, mRNA
Length=5478
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 980 AGGCAGCTCCAGCAA 994
> gi|1034572599|ref|XM_011544865.2| PREDICTED: Homo sapiens autophagy
related 2A (ATG2A), transcript variant X5, mRNA
Length=6349
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 973 AGGCAGCTCCAGCAA 987
> gi|1034572596|ref|XM_011544864.2| PREDICTED: Homo sapiens autophagy
related 2A (ATG2A), transcript variant X2, mRNA
Length=6341
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 980 AGGCAGCTCCAGCAA 994
> gi|1034572595|ref|XM_011544863.2| PREDICTED: Homo sapiens autophagy
related 2A (ATG2A), transcript variant X1, mRNA
Length=6356
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 980 AGGCAGCTCCAGCAA 994
> gi|1034572597|ref|XM_005273849.3| PREDICTED: Homo sapiens autophagy
related 2A (ATG2A), transcript variant X3, mRNA
Length=6332
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 980 AGGCAGCTCCAGCAA 994
> gi|1034572598|ref|XM_005273850.3| PREDICTED: Homo sapiens autophagy
related 2A (ATG2A), transcript variant X4, mRNA
Length=6326
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 980 AGGCAGCTCCAGCAA 994
> gi|239047270|ref|NM_015104.2| Homo sapiens autophagy related
2A (ATG2A), mRNA
Length=6378
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 989 AGGCAGCTCCAGCAA 1003
> gi|1034696656|ref|XR_001758638.1| PREDICTED: Homo sapiens uncharacterized
LOC105375490 (LOC105375490), transcript variant
X1, ncRNA
Length=2878
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 1728 AGGCAGCTCCAGCAA 1714
> gi|1034607272|ref|XR_001753664.1| PREDICTED: Homo sapiens sialic
acid binding Ig like lectin 9 (SIGLEC9), transcript variant
X7, misc_RNA
Length=1307
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGCA 16
|||||||||||||||
Sbjct 1029 AAGGCAGCTCCAGCA 1015
> gi|1034607269|ref|XM_011526732.2| PREDICTED: Homo sapiens sialic
acid binding Ig like lectin 9 (SIGLEC9), transcript variant
X5, mRNA
Length=1512
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGCA 16
|||||||||||||||
Sbjct 992 AAGGCAGCTCCAGCA 978
> gi|1034607268|ref|XM_011526730.2| PREDICTED: Homo sapiens sialic
acid binding Ig like lectin 9 (SIGLEC9), transcript variant
X4, mRNA
Length=1611
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGCA 16
|||||||||||||||
Sbjct 992 AAGGCAGCTCCAGCA 978
> gi|1034607265|ref|XM_017026595.1| PREDICTED: Homo sapiens sialic
acid binding Ig like lectin 9 (SIGLEC9), transcript variant
X2, mRNA
Length=1669
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGCA 16
|||||||||||||||
Sbjct 992 AAGGCAGCTCCAGCA 978
> gi|1034607267|ref|XR_001753663.1| PREDICTED: Homo sapiens sialic
acid binding Ig like lectin 9 (SIGLEC9), transcript variant
X3, misc_RNA
Length=1639
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGCA 16
|||||||||||||||
Sbjct 992 AAGGCAGCTCCAGCA 978
> gi|1034607270|ref|XM_017026596.1| PREDICTED: Homo sapiens sialic
acid binding Ig like lectin 9 (SIGLEC9), transcript variant
X6, mRNA
Length=1507
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGCA 16
|||||||||||||||
Sbjct 992 AAGGCAGCTCCAGCA 978
> gi|1034607264|ref|XM_006723146.3| PREDICTED: Homo sapiens sialic
acid binding Ig like lectin 9 (SIGLEC9), transcript variant
X1, mRNA
Length=3328
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGCA 16
|||||||||||||||
Sbjct 992 AAGGCAGCTCCAGCA 978
> gi|310616713|ref|NM_014441.2| Homo sapiens sialic acid binding
Ig like lectin 9 (SIGLEC9), transcript variant 2, mRNA
Length=1737
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGCA 16
|||||||||||||||
Sbjct 1020 AAGGCAGCTCCAGCA 1006
> gi|310616724|ref|NM_001198558.1| Homo sapiens sialic acid binding
Ig like lectin 9 (SIGLEC9), transcript variant 1, mRNA
Length=1600
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGCA 16
|||||||||||||||
Sbjct 1020 AAGGCAGCTCCAGCA 1006
> gi|1034658599|ref|XR_001745351.1| PREDICTED: Homo sapiens uncharacterized
LOC105375490 (LOC105375490), transcript variant
X1, ncRNA
Length=2878
Score = 30.2 bits (15), Expect = 1.9
Identities = 15/15 (100%), Gaps = 0/15 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCAA 17
|||||||||||||||
Sbjct 1728 AGGCAGCTCCAGCAA 1714
> gi|1034685361|ref|XR_001733777.1| PREDICTED: Homo sapiens uncharacterized
LOC102723708 (LOC102723708), ncRNA
Length=2131
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GCAGCTCCAGCAAT 18
||||||||||||||
Sbjct 1950 GCAGCTCCAGCAAT 1963
> gi|1034696080|ref|XM_017030424.1| PREDICTED: Homo sapiens uncharacterized
LOC107986755 (LOC107986755), transcript variant
X3, mRNA
Length=2494
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 2261 AAAGGCAGCTCCAG 2274
> gi|1034696084|ref|XM_017030426.1| PREDICTED: Homo sapiens uncharacterized
LOC107986755 (LOC107986755), transcript variant
X2, mRNA
Length=7010
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 5854 AAAGGCAGCTCCAG 5867
> gi|1034696082|ref|XM_017030425.1| PREDICTED: Homo sapiens uncharacterized
LOC107986755 (LOC107986755), transcript variant
X1, mRNA
Length=6188
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 5854 AAAGGCAGCTCCAG 5867
> gi|1034691099|ref|XR_936525.2| PREDICTED: Homo sapiens uncharacterized
LOC105376922 (LOC105376922), ncRNA
Length=3665
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 1636 AGGCAGCTCCAGCA 1649
> gi|1034689173|ref|XR_001743738.1| PREDICTED: Homo sapiens uncharacterized
LOC107985984 (LOC107985984), transcript variant
X1, ncRNA
Length=587
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 123 GGCAGCTCCAGCAA 136
> gi|1034689174|ref|XR_001743739.1| PREDICTED: Homo sapiens uncharacterized
LOC107985984 (LOC107985984), transcript variant
X2, ncRNA
Length=942
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 123 GGCAGCTCCAGCAA 136
> gi|327412331|ref|NR_038080.1| Homo sapiens long intergenic non-protein
coding RNA 482 (LINC00482), long non-coding RNA
Length=2970
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GCAGCTCCAGCAAT 18
||||||||||||||
Sbjct 694 GCAGCTCCAGCAAT 707
> gi|1034600320|ref|XR_934495.2| PREDICTED: Homo sapiens coiled-coil
domain containing 40 (CCDC40), transcript variant X2,
misc_RNA
Length=4382
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 3937 AAGGCAGCTCCAGC 3950
> gi|343183423|ref|NM_017950.3| Homo sapiens coiled-coil domain
containing 40 (CCDC40), transcript variant 1, mRNA
Length=4311
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 3850 AAGGCAGCTCCAGC 3863
> gi|1034597550|ref|XR_001752364.1| PREDICTED: Homo sapiens uncharacterized
LOC102723708 (LOC102723708), ncRNA
Length=2131
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GCAGCTCCAGCAAT 18
||||||||||||||
Sbjct 1950 GCAGCTCCAGCAAT 1963
> gi|1034594452|ref|XM_005255278.3| PREDICTED: Homo sapiens ubinuclein
1 (UBN1), transcript variant X2, mRNA
Length=5501
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 476 AAAGGCAGCTCCAG 489
> gi|1034592313|ref|XR_001751417.1| PREDICTED: Homo sapiens RCC1
domain containing 1 (RCCD1), transcript variant X4, misc_RNA
Length=4969
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 103 AAGGCAGCTCCAGC 116
> gi|1034592312|ref|XR_001751416.1| PREDICTED: Homo sapiens RCC1
domain containing 1 (RCCD1), transcript variant X3, misc_RNA
Length=5053
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 187 AAGGCAGCTCCAGC 200
> gi|63054859|ref|NM_001017919.1| Homo sapiens RCC1 domain containing
1 (RCCD1), transcript variant 2, mRNA
Length=2690
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 76 AAGGCAGCTCCAGC 89
> gi|63054857|ref|NM_033544.2| Homo sapiens RCC1 domain containing
1 (RCCD1), transcript variant 1, mRNA
Length=2774
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 160 AAGGCAGCTCCAGC 173
> gi|1034592310|ref|XR_001751414.1| PREDICTED: Homo sapiens RCC1
domain containing 1 (RCCD1), transcript variant X1, misc_RNA
Length=5030
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 164 AAGGCAGCTCCAGC 177
> gi|1034592311|ref|XR_001751415.1| PREDICTED: Homo sapiens RCC1
domain containing 1 (RCCD1), transcript variant X2, misc_RNA
Length=4954
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 88 AAGGCAGCTCCAGC 101
> gi|459683878|ref|NM_003403.4| Homo sapiens YY1 transcription
factor (YY1), mRNA
Length=3159
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 3006 AGGCAGCTCCAGCA 3019
> gi|671696012|ref|NM_005157.5| Homo sapiens ABL proto-oncogene
1, non-receptor tyrosine kinase (ABL1), transcript variant
a, mRNA
Length=5596
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 2311 GGCAGCTCCAGCAA 2324
> gi|62362411|ref|NM_007313.2| Homo sapiens ABL proto-oncogene
1, non-receptor tyrosine kinase (ABL1), transcript variant b,
mRNA
Length=5881
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 2615 GGCAGCTCCAGCAA 2628
> gi|1034657680|ref|XR_001744911.1| PREDICTED: Homo sapiens uncharacterized
LOC107986699 (LOC107986699), ncRNA
Length=7493
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 599 AGGCAGCTCCAGCA 612
> gi|1034658014|ref|XM_017012907.1| PREDICTED: Homo sapiens uncharacterized
LOC107986755 (LOC107986755), transcript variant
X2, mRNA
Length=7102
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 5947 AAAGGCAGCTCCAG 5960
> gi|1034658012|ref|XM_017012906.1| PREDICTED: Homo sapiens uncharacterized
LOC107986755 (LOC107986755), transcript variant
X1, mRNA
Length=6281
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 5947 AAAGGCAGCTCCAG 5960
> gi|283483994|ref|NM_000024.5| Homo sapiens adrenoceptor beta
2 (ADRB2), mRNA
Length=2058
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 919 AAAGGCAGCTCCAG 932
> gi|1034646990|ref|XR_001742420.1| PREDICTED: Homo sapiens uncharacterized
LOC107986355 (LOC107986355), transcript variant
X1, ncRNA
Length=1750
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GCAGCTCCAGCAAT 18
||||||||||||||
Sbjct 1247 GCAGCTCCAGCAAT 1260
> gi|1034646991|ref|XR_001742421.1| PREDICTED: Homo sapiens uncharacterized
LOC107986355 (LOC107986355), transcript variant
X2, ncRNA
Length=1656
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 5 GCAGCTCCAGCAAT 18
||||||||||||||
Sbjct 1153 GCAGCTCCAGCAAT 1166
> gi|115527085|ref|NM_000258.2| Homo sapiens myosin light chain
3 (MYL3), mRNA
Length=942
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 145 AAGGCAGCTCCAGC 158
> gi|1034637152|ref|XR_940538.2| PREDICTED: Homo sapiens uncharacterized
LOC105376922 (LOC105376922), ncRNA
Length=3665
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 1636 AGGCAGCTCCAGCA 1649
> gi|1034619783|ref|XR_001739879.1| PREDICTED: Homo sapiens uncharacterized
LOC107985984 (LOC107985984), transcript variant
X1, ncRNA
Length=629
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 165 GGCAGCTCCAGCAA 178
> gi|1034619784|ref|XR_001739880.1| PREDICTED: Homo sapiens uncharacterized
LOC107985984 (LOC107985984), transcript variant
X2, ncRNA
Length=984
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Plus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 165 GGCAGCTCCAGCAA 178
> gi|1034699447|ref|XR_001736820.1| PREDICTED: Homo sapiens uncharacterized
LOC107985697 (LOC107985697), ncRNA
Length=1333
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 1040 AGGCAGCTCCAGCA 1027
> gi|1034676450|ref|XR_001756016.1| PREDICTED: Homo sapiens uncharacterized
LOC107985697 (LOC107985697), ncRNA
Length=1332
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 1039 AGGCAGCTCCAGCA 1026
> gi|1034675781|ref|XR_001755747.1| PREDICTED: Homo sapiens uncharacterized
LOC107985697 (LOC107985697), ncRNA
Length=1332
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 1039 AGGCAGCTCCAGCA 1026
> gi|1034626547|ref|XR_936795.2| PREDICTED: Homo sapiens uncharacterized
LOC105372637 (LOC105372637), transcript variant X6,
ncRNA
Length=5630
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 2438 GGCAGCTCCAGCAA 2425
> gi|1034626544|ref|XR_936790.2| PREDICTED: Homo sapiens uncharacterized
LOC105372637 (LOC105372637), transcript variant X3,
ncRNA
Length=2210
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 1214 GGCAGCTCCAGCAA 1201
> gi|1034626542|ref|XR_936787.2| PREDICTED: Homo sapiens uncharacterized
LOC105372637 (LOC105372637), transcript variant X1,
ncRNA
Length=2389
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 1393 GGCAGCTCCAGCAA 1380
> gi|1034626543|ref|XR_936788.2| PREDICTED: Homo sapiens uncharacterized
LOC105372637 (LOC105372637), transcript variant X2,
ncRNA
Length=2406
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 1410 GGCAGCTCCAGCAA 1397
> gi|328927013|ref|NM_001205317.1| Homo sapiens regulating synaptic
membrane exocytosis 4 (RIMS4), transcript variant 1, mRNA
Length=5210
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCAATAA 20
||||||||||||| ||||
Sbjct 2438 AGGCAGCTCCAGCTATAA 2421
> gi|328927012|ref|NM_182970.3| Homo sapiens regulating synaptic
membrane exocytosis 4 (RIMS4), transcript variant 2, mRNA
Length=5207
Score = 28.2 bits (14), Expect = 7.3
Identities = 17/18 (94%), Gaps = 0/18 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCAATAA 20
||||||||||||| ||||
Sbjct 2435 AGGCAGCTCCAGCTATAA 2418
> gi|38149990|ref|NM_003091.3| Homo sapiens small nuclear ribonucleoprotein
polypeptides B and B1 (SNRPB), transcript variant
2, mRNA
Length=1153
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 466 GGCAGCTCCAGCAA 453
> gi|38150006|ref|NM_198216.1| Homo sapiens small nuclear ribonucleoprotein
polypeptides B and B1 (SNRPB), transcript variant
1, mRNA
Length=1007
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 4 GGCAGCTCCAGCAA 17
||||||||||||||
Sbjct 466 GGCAGCTCCAGCAA 453
> gi|1034609934|ref|XM_011527442.2| PREDICTED: Homo sapiens sialic
acid binding Ig like lectin 12 (gene/pseudogene) (SIGLEC12),
transcript variant X2, mRNA
Length=1539
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 1358 AGGCAGCTCCAGCA 1345
> gi|1034609933|ref|XM_011527441.2| PREDICTED: Homo sapiens sialic
acid binding Ig like lectin 12 (gene/pseudogene) (SIGLEC12),
transcript variant X1, mRNA
Length=1829
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 1055 AGGCAGCTCCAGCA 1042
> gi|530788281|ref|NM_033329.2| Homo sapiens sialic acid binding
Ig like lectin 12 (gene/pseudogene) (SIGLEC12), transcript
variant 2, mRNA
Length=1868
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 968 AGGCAGCTCCAGCA 955
> gi|530788280|ref|NM_053003.3| Homo sapiens sialic acid binding
Ig like lectin 12 (gene/pseudogene) (SIGLEC12), transcript
variant 1, mRNA
Length=2258
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 1358 AGGCAGCTCCAGCA 1345
> gi|1034607273|ref|XM_011526734.2| PREDICTED: Homo sapiens sialic
acid binding Ig like lectin 8 (SIGLEC8), transcript variant
X1, mRNA
Length=2892
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 976 AGGCAGCTCCAGCA 963
> gi|1034607274|ref|XM_011526735.2| PREDICTED: Homo sapiens sialic
acid binding Ig like lectin 8 (SIGLEC8), transcript variant
X2, mRNA
Length=2648
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 732 AGGCAGCTCCAGCA 719
> gi|94538342|ref|NM_014442.2| Homo sapiens sialic acid binding
Ig like lectin 8 (SIGLEC8), mRNA
Length=2967
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 1015 AGGCAGCTCCAGCA 1002
> gi|816197589|ref|NM_001308363.1| Homo sapiens microtubule associated
protein 1S (MAP1S), transcript variant 2, mRNA
Length=3432
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 2040 AAAGGCAGCTCCAG 2027
> gi|1034608386|ref|XM_017026931.1| PREDICTED: Homo sapiens microtubule
associated protein 1S (MAP1S), transcript variant X2,
mRNA
Length=3684
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 2275 AAAGGCAGCTCCAG 2262
> gi|816197655|ref|NM_018174.5| Homo sapiens microtubule associated
protein 1S (MAP1S), transcript variant 1, mRNA
Length=3326
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 1934 AAAGGCAGCTCCAG 1921
> gi|1034608384|ref|XM_017026930.1| PREDICTED: Homo sapiens microtubule
associated protein 1S (MAP1S), transcript variant X1,
mRNA
Length=3443
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 2034 AAAGGCAGCTCCAG 2021
> gi|148613883|ref|NM_004822.2| Homo sapiens netrin 1 (NTN1), mRNA
Length=5954
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 2801 AGGCAGCTCCAGCA 2788
> gi|1034596561|ref|XM_017023866.1| PREDICTED: Homo sapiens ubiquitin
specific peptidase 10 (USP10), transcript variant X7,
mRNA
Length=4202
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 2462 AAAGGCAGCTCCAG 2449
> gi|1034596559|ref|XM_017023865.1| PREDICTED: Homo sapiens ubiquitin
specific peptidase 10 (USP10), transcript variant X6,
mRNA
Length=3670
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 1930 AAAGGCAGCTCCAG 1917
> gi|1034596563|ref|XM_017023867.1| PREDICTED: Homo sapiens ubiquitin
specific peptidase 10 (USP10), transcript variant X8,
mRNA
Length=3793
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 2053 AAAGGCAGCTCCAG 2040
> gi|578829353|ref|XM_006721332.1| PREDICTED: Homo sapiens ubiquitin
specific peptidase 10 (USP10), transcript variant X1,
mRNA
Length=3386
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 1646 AAAGGCAGCTCCAG 1633
> gi|1034596555|ref|XM_017023863.1| PREDICTED: Homo sapiens ubiquitin
specific peptidase 10 (USP10), transcript variant X3,
mRNA
Length=3525
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 1785 AAAGGCAGCTCCAG 1772
> gi|767990828|ref|XM_011523443.1| PREDICTED: Homo sapiens ubiquitin
specific peptidase 10 (USP10), transcript variant X9,
mRNA
Length=3578
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 1838 AAAGGCAGCTCCAG 1825
> gi|1034596565|ref|XM_017023868.1| PREDICTED: Homo sapiens ubiquitin
specific peptidase 10 (USP10), transcript variant X10,
mRNA
Length=3627
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 1887 AAAGGCAGCTCCAG 1874
> gi|767990822|ref|XM_011523440.1| PREDICTED: Homo sapiens ubiquitin
specific peptidase 10 (USP10), transcript variant X2,
mRNA
Length=3507
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 1767 AAAGGCAGCTCCAG 1754
> gi|767990824|ref|XM_011523441.1| PREDICTED: Homo sapiens ubiquitin
specific peptidase 10 (USP10), transcript variant X4,
mRNA
Length=3831
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 2091 AAAGGCAGCTCCAG 2078
> gi|1034596557|ref|XM_017023864.1| PREDICTED: Homo sapiens ubiquitin
specific peptidase 10 (USP10), transcript variant X5,
mRNA
Length=3801
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 2061 AAAGGCAGCTCCAG 2048
> gi|1034596567|ref|XM_017023869.1| PREDICTED: Homo sapiens ubiquitin
specific peptidase 10 (USP10), transcript variant X11,
mRNA
Length=3664
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 1924 AAAGGCAGCTCCAG 1911
> gi|440918733|ref|NR_073577.1| Homo sapiens ubiquitin specific
peptidase 10 (USP10), transcript variant 3, non-coding RNA
Length=2297
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 537 AAAGGCAGCTCCAG 524
> gi|440918734|ref|NR_073578.1| Homo sapiens ubiquitin specific
peptidase 10 (USP10), transcript variant 4, non-coding RNA
Length=3136
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 1376 AAAGGCAGCTCCAG 1363
> gi|119220604|ref|NM_005153.2| Homo sapiens ubiquitin specific
peptidase 10 (USP10), transcript variant 2, mRNA
Length=3399
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 1639 AAAGGCAGCTCCAG 1626
> gi|440918694|ref|NM_001272075.1| Homo sapiens ubiquitin specific
peptidase 10 (USP10), transcript variant 1, mRNA
Length=3520
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 1760 AAAGGCAGCTCCAG 1747
> gi|1034586177|ref|XR_001750155.1| PREDICTED: Homo sapiens solute
carrier family 25 member 29 (SLC25A29), transcript variant
X2, misc_RNA
Length=4378
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 3 AGGCAGCTCCAGCA 16
||||||||||||||
Sbjct 3483 AGGCAGCTCCAGCA 3470
> gi|331284124|ref|NM_015409.4| Homo sapiens E1A binding protein
p400 (EP400), mRNA
Length=12317
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 1 AAAGGCAGCTCCAG 14
||||||||||||||
Sbjct 7207 AAAGGCAGCTCCAG 7194
> gi|385862230|ref|NM_001258426.1| Homo sapiens solute carrier
family 4 member 9 (SLC4A9), transcript variant 3, mRNA
Length=3251
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1303 AAGGCAGCTCCAGC 1290
> gi|385862232|ref|NM_001258427.1| Homo sapiens solute carrier
family 4 member 9 (SLC4A9), transcript variant 4, mRNA
Length=3161
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1336 AAGGCAGCTCCAGC 1323
> gi|151101448|ref|NM_031467.2| Homo sapiens solute carrier family
4 member 9 (SLC4A9), transcript variant 2, mRNA
Length=3293
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1336 AAGGCAGCTCCAGC 1323
> gi|385862234|ref|NM_001258428.1| Homo sapiens solute carrier
family 4 member 9 (SLC4A9), transcript variant 1, mRNA
Length=3422
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1408 AAGGCAGCTCCAGC 1395
> gi|1034646406|ref|XM_011537694.2| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X13,
mRNA
Length=3268
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1965 AAGGCAGCTCCAGC 1952
> gi|1034646398|ref|XM_017009939.1| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X9,
mRNA
Length=3716
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1860 AAGGCAGCTCCAGC 1847
> gi|1034646395|ref|XM_005268521.3| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X7,
mRNA
Length=3758
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1893 AAGGCAGCTCCAGC 1880
> gi|1034646390|ref|XR_001742292.1| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X4,
misc_RNA
Length=4046
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1965 AAGGCAGCTCCAGC 1952
> gi|1034646391|ref|XM_017009936.1| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X5,
mRNA
Length=3826
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1893 AAGGCAGCTCCAGC 1880
> gi|1034646393|ref|XM_017009937.1| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X6,
mRNA
Length=3784
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1851 AAGGCAGCTCCAGC 1838
> gi|1034646388|ref|XM_017009935.1| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X3,
mRNA
Length=3865
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1932 AAGGCAGCTCCAGC 1919
> gi|1034646402|ref|XM_017009941.1| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X11,
mRNA
Length=3700
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1965 AAGGCAGCTCCAGC 1952
> gi|1034646396|ref|XM_017009938.1| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X8,
mRNA
Length=3733
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1965 AAGGCAGCTCCAGC 1952
> gi|1034646386|ref|XM_017009934.1| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X2,
mRNA
Length=3889
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1965 AAGGCAGCTCCAGC 1952
> gi|1034646400|ref|XM_017009940.1| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X10,
mRNA
Length=3709
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1965 AAGGCAGCTCCAGC 1952
> gi|1034646384|ref|XM_017009933.1| PREDICTED: Homo sapiens solute
carrier family 4 member 9 (SLC4A9), transcript variant X1,
mRNA
Length=3898
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 1965 AAGGCAGCTCCAGC 1952
> gi|298676489|ref|NR_033781.1| Homo sapiens hydroxy-delta-5-steroid
dehydrogenase, 3 beta, pseudogene 4 (HSD3BP4), non-coding
RNA
Length=8697
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 207 AAGGCAGCTCCAGC 194
> gi|115345345|ref|NM_000862.2| Homo sapiens hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase 1 (HSD3B1),
mRNA
Length=1689
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 166 AAGGCAGCTCCAGC 153
> gi|1034558032|ref|XM_017001119.1| PREDICTED: Homo sapiens hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase
1 (HSD3B1), transcript variant X2, mRNA
Length=1646
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 130 AAGGCAGCTCCAGC 117
> gi|1034558031|ref|XM_011541314.2| PREDICTED: Homo sapiens hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase
1 (HSD3B1), transcript variant X1, mRNA
Length=1723
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 207 AAGGCAGCTCCAGC 194
> gi|260763929|ref|NM_000198.3| Homo sapiens hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase 2 (HSD3B2),
transcript variant 1, mRNA
Length=1730
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 190 AAGGCAGCTCCAGC 177
> gi|260763930|ref|NM_001166120.1| Homo sapiens hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase
2 (HSD3B2), transcript variant 2, mRNA
Length=1807
Score = 28.2 bits (14), Expect = 7.3
Identities = 14/14 (100%), Gaps = 0/14 (0%)
Strand=Plus/Minus
Query 2 AAGGCAGCTCCAGC 15
||||||||||||||
Sbjct 267 AAGGCAGCTCCAGC 254
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Effective search space used: 2337180340
Database: rna.fa
Posted date: Jan 6, 2017 3:58 PM
Number of letters in database: 587,117,901
Number of sequences in database: 176,426
Matrix: blastn matrix 1 -3
Gap Penalties: Existence: 5, Extension: 2